prot_H-paniculata_contig24769.6721.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24769.6721.1
Unique Nameprot_H-paniculata_contig24769.6721.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length117
Homology
BLAST of mRNA_H-paniculata_contig24769.6721.1 vs. uniprot
Match: A0A6H5JHI2_9PHAE (FAD-binding FR-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI2_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 1.280e-28
Identity = 55/113 (48.67%), Postives = 78/113 (69.03%), Query Frame = 0
Query:    4 ACATTTISLVLITIASALAGALFAGVMVCIFSKCYATRYFLHHSWIQLIVDFEPTHDLHTSYGYMVLVCGVLHALAHIVRYIVDNDADLLYTETVNRSGVVATILMVPSVVPM 116
            AC T+   + LIT+A   AGALF  ++ C+ +KCYATRY LHHSW+ LI+DFEP+H LHT +G ++L+C V+H+  HI    +   AD  +   +NRSGVVA +L++P  +PM
Sbjct:  252 ACVTSGPEMALITVARLTAGALFPSIIFCVLAKCYATRYLLHHSWLTLIIDFEPSHKLHTYFGVLILLCSVVHSACHIAVGALQRRADYAFENEINRSGVVAMLLLLPIALPM 364          
BLAST of mRNA_H-paniculata_contig24769.6721.1 vs. uniprot
Match: D7G8C8_ECTSI (Putative respiratory burst oxidase protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C8_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 2.850e-27
Identity = 52/113 (46.02%), Postives = 78/113 (69.03%), Query Frame = 0
Query:    4 ACATTTISLVLITIASALAGALFAGVMVCIFSKCYATRYFLHHSWIQLIVDFEPTHDLHTSYGYMVLVCGVLHALAHIVRYIVDNDADLLYTETVNRSGVVATILMVPSVVPM 116
            AC ++   + LI++A   AGALF  +  C+ SKCYATRY LHHSW+  I+DFEP+H LHT +G ++L+C V+H++ HI    +   AD  + + +NRSG+VA +L++P  +PM
Sbjct:  272 ACVSSGPEMALISVARLTAGALFPSIFFCVLSKCYATRYLLHHSWLTFIIDFEPSHKLHTYFGVLILLCSVVHSVCHIAVGALQRRADHAFKDEINRSGLVAVLLLLPIALPM 384          
BLAST of mRNA_H-paniculata_contig24769.6721.1 vs. uniprot
Match: D7G8C4_ECTSI (Putative respiratory burst oxidase homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C4_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 4.300e-26
Identity = 55/113 (48.67%), Postives = 77/113 (68.14%), Query Frame = 0
Query:    4 ACATTTISLVLITIASALAGALFAGVMVCIFSKCYATRYFLHHSWIQLIVDFEPTHDLHTSYGYMVLVCGVLHALAHIVRYIVDNDADLLYTETVNRSGVVATILMVPSVVPM 116
            AC T+ +S VL+T++   AGAL   +  CI SKCYATRYFLHHSW+ L+V FEP H+LHT +G + L+ GVLH LAH+ R + +   +  +  ++ RSG +A +L+ P  VPM
Sbjct:   52 ACVTSALSKVLLTVSRMSAGALLPSMACCILSKCYATRYFLHHSWLALVVSFEPAHELHTYFGSLTLLFGVLHGLAHLAREVNEGHWNC-FASSMGRSGFIALVLLFPIAVPM 163          
BLAST of mRNA_H-paniculata_contig24769.6721.1 vs. uniprot
Match: A0A6H5JEC1_9PHAE (FAD_binding_8 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEC1_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 4.680e-26
Identity = 55/113 (48.67%), Postives = 77/113 (68.14%), Query Frame = 0
Query:    4 ACATTTISLVLITIASALAGALFAGVMVCIFSKCYATRYFLHHSWIQLIVDFEPTHDLHTSYGYMVLVCGVLHALAHIVRYIVDNDADLLYTETVNRSGVVATILMVPSVVPM 116
            AC T+ +S VL+T++   AGAL   +  CI SKCYATRYFLHHSW+ ++V FEP H+LHT +G + L+ GVLH LAH+ R + + + +  +   + RSG VA +L+ P  VPM
Sbjct:  261 ACVTSALSKVLLTVSRMSAGALLPSMACCILSKCYATRYFLHHSWLAVVVSFEPAHELHTFFGSLTLLFGVLHGLAHLAREVNEGNWNF-FASPMGRSGFVALVLLFPIAVPM 372          
BLAST of mRNA_H-paniculata_contig24769.6721.1 vs. uniprot
Match: D8LF83_ECTSI (Putative respiratory burst oxidase homolog protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF83_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 1.470e-22
Identity = 50/112 (44.64%), Postives = 74/112 (66.07%), Query Frame = 0
Query:    5 CATTTISLVLITIASALAGALFAGVMVCIFSKCYATRYFLHHSWIQLIVDFEPTHDLHTSYGYMVLVCGVLHALAHIVRYIVDNDADLLYTETVNRSGVVATILMVPSVVPM 116
            CATT    V++T +  LAG L+A + V + SKCYA+R +LHHSW+  ++DFEP HDLHT +G++ LV G  H + H+ R    ++  L+Y     RSG+ A +L++P V+PM
Sbjct:  156 CATTLPEKVMLTGSRFLAGLLYASLSVSVVSKCYASRAYLHHSWLGTVLDFEPAHDLHTYFGFLTLVAGWAHGVLHLARVSYADEKFLMYETHAFRSGIFAILLLLPIVLPM 267          
BLAST of mRNA_H-paniculata_contig24769.6721.1 vs. uniprot
Match: D7G8D1_ECTSI (Putative respiratory burst oxidase homolog protein C-ter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8D1_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 1.530e-21
Identity = 44/104 (42.31%), Postives = 68/104 (65.38%), Query Frame = 0
Query:   14 LITIASALAGALFAGVMVCIFSKCYATRYFLHHSWIQLIVDFEPTHDLHTSYGYMVLVCGVLHALAHIVRYIVDNDADLLYTETVNRSGVVATILMVPSVVPMA 117
            L+++A   AGAL   + VCI SKCYATRY LH+SW+  IVDFEP+H  H  +G + ++C  +H+  H+V  I+      +  + +N SG+VA +L++P  +PM+
Sbjct:    3 LMSVARLTAGALIPSITVCIVSKCYATRYVLHYSWLAHIVDFEPSHTPHKYFGILAMLCSAIHSACHVVIGILQRRPHHVVKDEMNLSGLVAFLLVLPVALPMS 106          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24769.6721.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JHI2_9PHAE1.280e-2848.67FAD-binding FR-type domain-containing protein n=1 ... [more]
D7G8C8_ECTSI2.850e-2746.02Putative respiratory burst oxidase protein n=1 Tax... [more]
D7G8C4_ECTSI4.300e-2648.67Putative respiratory burst oxidase homolog n=1 Tax... [more]
A0A6H5JEC1_9PHAE4.680e-2648.67FAD_binding_8 domain-containing protein n=1 Tax=Ec... [more]
D8LF83_ECTSI1.470e-2244.64Putative respiratory burst oxidase homolog protein... [more]
D7G8D1_ECTSI1.530e-2142.31Putative respiratory burst oxidase homolog protein... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 87..97
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 35..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..34
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 117..117
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..116
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 64..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24769contigH-paniculata_contig24769:148..1687 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24769.6721.1mRNA_H-paniculata_contig24769.6721.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24769 148..1687 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24769.6721.1 ID=prot_H-paniculata_contig24769.6721.1|Name=mRNA_H-paniculata_contig24769.6721.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bp
SPSACATTTISLVLITIASALAGALFAGVMVCIFSKCYATRYFLHHSWIQ
LIVDFEPTHDLHTSYGYMVLVCGVLHALAHIVRYIVDNDADLLYTETVNR
SGVVATILMVPSVVPMA
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