prot_H-paniculata_contig2469.6694.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2469.6694.1
Unique Nameprot_H-paniculata_contig2469.6694.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length488
Homology
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BLAST of mRNA_H-paniculata_contig2469.6694.1 vs. uniprot
Match: A0A6H5KEQ8_9PHAE (ANAPC4_WD40 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEQ8_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 2.870e-15
Identity = 96/243 (39.51%), Postives = 108/243 (44.44%), Query Frame = 0 
Query:  308 SRTVYSDRFIPSRFGSVLESGSPFLAGSSASSLPSPRAAADASVGLRNSQSIDGTNGR---------------------------------------SLASFG------GRAGSAAAAAA----------------RREAIDPGGIRGTEGAPAPGQGMAAGVAGGTGXXXXXXXXXX---------GDAASVVGVPQYWPYGSSVTDAQREGQTMLNMLLRSELLGADGVSSPGRPDGAGAA 480
            S+ +YSDRFIP+RFGSVLE+GSPFL G  + S  + R              +  TNG                                         LA +G      G   SA   A                 R +A DPGGIRGTEG          GVAG  G  XXXXXXXX           A   VG P+YWPYGSS TDAQREGQTMLNMLLRSELLG +     G P+ AGAA
Sbjct:  119 SQAIYSDRFIPARFGSVLETGSPFLVGGGSHSTAAGRG-------------VHATNGNXXXXXXXXXXXXXXXXXXXXXXGGQRGXXXXXXXXXXXXGLAGYGSGFSPRGLIFSAGGPAXXXXXXXXXXXXXXXXXRLDAADPGGIRGTEG--------GGGVAGRQGRPXXXXXXXXXXXXXXXXGSPALPGVGSPEYWPYGSSATDAQREGQTMLNMLLRSELLGTESPGGRG-PEQAGAA 339
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BLAST of mRNA_H-paniculata_contig2469.6694.1 vs. uniprot
Match: D8LDI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDI2_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 5.800e-6
Identity = 29/40 (72.50%), Postives = 32/40 (80.00%), Query Frame = 0 
Query:    1 MASDRPGETRCTPPRPPAPPRLVSGASPGSSRGKLRSEYQ 40
            MA+DR GE   TPPR PA  R +SG+SPGSSRGKLRSEYQ
Sbjct:    1 MAADRQGELGWTPPRAPAVSRRLSGSSPGSSRGKLRSEYQ 40
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2469.6694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KEQ8_9PHAE2.870e-1539.51ANAPC4_WD40 domain-containing protein n=1 Tax=Ecto... [more]
D8LDI2_ECTSI5.800e-672.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 207..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2469contigH-paniculata_contig2469:11825..14697 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2469.6694.1mRNA_H-paniculata_contig2469.6694.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2469 11825..15316 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2469.6694.1 ID=prot_H-paniculata_contig2469.6694.1|Name=mRNA_H-paniculata_contig2469.6694.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=488bp
MASDRPGETRCTPPRPPAPPRLVSGASPGSSRGKLRSEYQARLGGMSVKK
RRAGPLKFPGQSGGAKATGTAGASQLSATARTPPPPPPGVRQTSLLDFCT
VTSDRSAAVASGLPRPGDHSQASAVVVTPQYYSAGTVPREGGVEGAQAAA
MAAGLVAARVSQESGRGDGDKDLYKEAVDVQAVVSPSPVPSRARLFVDNM
DTADMDVEEVDHTKEEQNEEEEEERRRRRQATAIPGYSTPTPPPHTDTTR
RASPGAFSPATPVRRSTPPDSRGLLGSGAATALGGHFGGSGGKGAGCSGA
GGARMVDSRTVYSDRFIPSRFGSVLESGSPFLAGSSASSLPSPRAAADAS
VGLRNSQSIDGTNGRSLASFGGRAGSAAAAAARREAIDPGGIRGTEGAPA
PGQGMAAGVAGGTGAGVDGAATPGGDAASVVGVPQYWPYGSSVTDAQREG
QTMLNMLLRSELLGADGVSSPGRPDGAGAAATGLLSDA
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