prot_H-paniculata_contig24686.6691.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24686.6691.1
Unique Nameprot_H-paniculata_contig24686.6691.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length78
Homology
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BLAST of mRNA_H-paniculata_contig24686.6691.1 vs. uniprot
Match: D7FJ49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ49_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 1.490e-14
Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 0 
Query:    1 MSGSEGERAKFKGGVVFASSEDMANICQYYLDRPEERQAIAKQGRQLYEMHGNESEILRSPV 62
            MSGS+ ERAKF GGVVFA  E +A  CQ+YL RPE R +IA+ GR+L+E H  E++ILR PV
Sbjct:  139 MSGSDSERAKFSGGVVFAPPERLAETCQFYLQRPELRMSIAQSGRRLFEQH-LEADILRRPV 199
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BLAST of mRNA_H-paniculata_contig24686.6691.1 vs. uniprot
Match: A0A6H5K7W6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7W6_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 9.620e-13
Identity = 37/62 (59.68%), Postives = 46/62 (74.19%), Query Frame = 0 
Query:    1 MSGSEGERAKFKGGVVFASSEDMANICQYYLDRPEERQAIAKQGRQLYEMHGNESEILRSPV 62
            MSGS+ ERAKF GGVVFA  E +A  CQ+YL RP  R +IA+ GR+L+E H  E++ILR PV
Sbjct:  305 MSGSDSERAKFSGGVVFAPPERLAETCQFYLHRPGLRMSIAESGRRLFEQH-LEADILRRPV 365
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24686.6691.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJ49_ECTSI1.490e-1461.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7W6_9PHAE9.620e-1359.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13524Glyco_trans_1_2coord: 14..47
e-value: 2.3E-6
score: 27.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24686contigH-paniculata_contig24686:924..1157 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24686.6691.1mRNA_H-paniculata_contig24686.6691.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24686 906..1157 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24686.6691.1 ID=prot_H-paniculata_contig24686.6691.1|Name=mRNA_H-paniculata_contig24686.6691.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=78bp
MSGSEGERAKFKGGVVFASSEDMANICQYYLDRPEERQAIAKQGRQLYEM
HGNESEILRSPVEDLLTRRAQLSALNI*
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