prot_H-paniculata_contig24666.6686.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24666.6686.1
Unique Nameprot_H-paniculata_contig24666.6686.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length176
Homology
BLAST of mRNA_H-paniculata_contig24666.6686.1 vs. uniprot
Match: A0A6H5KMN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN1_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 1.320e-69
Identity = 121/160 (75.62%), Postives = 131/160 (81.88%), Query Frame = 0
Query:    9 RLLCTNADLHPTRKGIFAMDTRGGTVATGSKDATVAIAFLTPTGLRLDRVLGDAGGSERFHEKVIKGVDIRD-NMVASCGDDSNVRVSDIRECSNGNFGVSHRLDRVHAG-ACHTVRWHPGDDNLLLTAGLDSTVKLFDLRRPEVAVHVFRGHCPYALAR 166
            RLL T  DLHPTRKGIFAMD+ G  VATGSKD TVAIA L PTG+  DRVLGD GGSE FHEKV+KGV +RD N VASCGDDSNVRVSD+R  S+ +FGVS RLD VH G ACHTVRWHP DDNLLL+AGLDSTV L+DLRR    +HVFRGHCPYALAR
Sbjct:  506 RLLSTMDDLHPTRKGIFAMDSHGTRVATGSKDTTVAIASLGPTGIEHDRVLGDPGGSEAFHEKVVKGVSLRDENTVASCGDDSNVRVSDLR--SSSSFGVSQRLDGVHGGRACHTVRWHPLDDNLLLSAGLDSTVNLYDLRRLAAPLHVFRGHCPYALAR 663          
BLAST of mRNA_H-paniculata_contig24666.6686.1 vs. uniprot
Match: D7G8U5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8U5_ECTSI)

HSP 1 Score: 229 bits (584), Expect = 2.520e-67
Identity = 119/160 (74.38%), Postives = 129/160 (80.62%), Query Frame = 0
Query:    9 RLLCTNADLHPTRKGIFAMDTRGGTVATGSKDATVAIAFLTPTGLRLDRVLGDAGGSERFHEKVIKGVDIRD-NMVASCGDDSNVRVSDIRECSNGNFGVSHRLDRVHAG-ACHTVRWHPGDDNLLLTAGLDSTVKLFDLRRPEVAVHVFRGHCPYALAR 166
            RLL T  DLHPTRKGIFAMD+ G  VATGSKD TVAIA L PTG+  DRVLGD GGSE FHEKV+KGV +RD N VASCGDDSNVRVSD+R  S+ + GVS RLD VH G ACHTVRWHP DDN LL+AGLDSTV L+DLRR    +HVFRGHCPYALAR
Sbjct:  629 RLLSTMDDLHPTRKGIFAMDSHGTRVATGSKDTTVAIASLRPTGIERDRVLGDPGGSEAFHEKVVKGVSLRDENTVASCGDDSNVRVSDLR--SSSSVGVSQRLDGVHGGRACHTVRWHPLDDNRLLSAGLDSTVNLYDLRRLAAPLHVFRGHCPYALAR 786          
BLAST of mRNA_H-paniculata_contig24666.6686.1 vs. uniprot
Match: A0A835ZGB7_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGB7_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.020e-37
Identity = 85/160 (53.12%), Postives = 102/160 (63.75%), Query Frame = 0
Query:   10 LLCTNADLHPTRKGIFAMDTRGGTVATGSKDATVAIAFLTPTG--LRLDRVLGDAGGSERFHEKVIKGVDIRD-NMVASCGDDSNVRVSDIRECSNGNFGVSHRLDRVHAGACHTVRWHPGDDNLLLTAGLDSTVKLFDLRRPEVAVHVFRGHCPYALAR 166
            L+    DLH   KGIF+M    G +AT SKD TVAI+ L   G  + LDRVLGD   +E  H  VIK V +RD   VASCGDD++VRV DIR        V   L+ VH+   HTVRWHP D++LLLTAGLD+ VKLFDLR+P  A   +RGH P+AL R
Sbjct:  366 LVAQACDLHS--KGIFSMHMHRGVIATASKDRTVAISKLVGDGRGIALDRVLGD---TETLHAGVIKDVQLRDATTVASCGDDASVRVCDIRAARGYYIAVG--LEDVHSACAHTVRWHPTDEHLLLTAGLDTVVKLFDLRKPNAAAVEYRGHVPFALPR 518          
BLAST of mRNA_H-paniculata_contig24666.6686.1 vs. uniprot
Match: R1CA86_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CA86_EMIHU)

HSP 1 Score: 66.6 bits (161), Expect = 1.020e-9
Identity = 54/155 (34.84%), Postives = 67/155 (43.23%), Query Frame = 0
Query:   15 ADLHPTRKGIFAMDTRGGTVATGSKDATVAIAFLTPTGLRLDRVLGDAGGSERFHEKVIKGVDIRD-NMVASCGDDSNVRVSDIRECSNGNFGVSHRLDRVHAGACHTVRWHPGDDN--LLLTAGLDSTVKLFDLRRPEVAVHVFRGHCPYALAR 166
            + L P   GIFAM   GG V T SKD TVA++ L       D  L      +  H  VIK V  RD N+ AS G   N+RV D R                            GD +  LLL+AG D  +KL+D R P   +H  +GH    +AR
Sbjct:  205 SQLEPQSGGIFAMHEAGGRVLTASKDGTVALSMLA------DDCLRPGASWDELHSGVIKSVCWRDGNVFASAGRGGNLRVVDPRA---------------------------GDPSAGLLLSAGYDLQIKLWDARAPSRPLHTLQGHVAPRVAR 326          
BLAST of mRNA_H-paniculata_contig24666.6686.1 vs. uniprot
Match: A0A448ZQL5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQL5_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 5.140e-8
Identity = 57/174 (32.76%), Postives = 81/174 (46.55%), Query Frame = 0
Query:    8 RRLLCTNADLHPTRKGIFAMDT----RGGT---VATGSKDATVAIAFLTPTGLRLDRVLGDAGGS-----ERFHEKVIKGVDIRDN---MVASCGDDSNVRVSDIRECSNGNFGVSHRLDRVHAGACHTVRWHPGDDNLLLTAGLDSTVKLFDLRRPEVAVHVFRGHCPYALAR 166
            R L  T  + H +  GIF MD     R G+   +ATGSKD TVA++ L         + G    +      RFH   +  V ++D+   ++AS  DD  V V D R    G+  V+ R+   H    H+V W P  + +L+TAGLD  V+++D R     V    GH P    R
Sbjct:  517 RLLQRTGKEYHGS--GIFCMDAGLPDRAGSDTVIATGSKDKTVAVSTL-------GSIAGGGASALPVWRSRFHTAKVGAVRLKDSSSPLLASASDDGIVAVHDHRX--EGSXPVA-RIGDAHDRP-HSVVWDPCHEFVLVTAGLDPVVRVWDRRNLSAPVASLEGHVPTRSGR 677          
BLAST of mRNA_H-paniculata_contig24666.6686.1 vs. uniprot
Match: A0A804IRQ1_MUSAM ((wild Malaysian banana) hypothetical protein n=2 Tax=Musa TaxID=4640 RepID=A0A804IRQ1_MUSAM)

HSP 1 Score: 59.3 bits (142), Expect = 3.800e-7
Identity = 47/162 (29.01%), Postives = 77/162 (47.53%), Query Frame = 0
Query:   10 LLCTNADLHPTRKGIFAMDTRGGTVATGSKDATVAIAFLTPTG-LRLDRVLGDAGGSERFHEKVIKGVDIRDNM--VASCGDDSNVRVSDIRECSNGNFGVSHRLDRVHAGACHTVRWHPGDDNLLLTAGLDSTVKLFDLRRPEVAVHV-FRGHCPYALARC 167
            ++  + +LH    G+++MD     +AT SKD++V ++ LTP G L  +R +         H  VI+GV   D    +A CG D  + V D R        +      +H+   +TV W+  ++ L+L+AG D  + L+D+R     VH   +GH       C
Sbjct:  272 VVAKSTELHTG--GVYSMDRFSCWIATASKDSSVGVSRLTPAGELVAERNITG------HHSGVIRGVCFGDGKERLADCGVDGRICVLDPRSPEPCALTIK----SLHSTGVNTVEWNKWNNFLILSAGSDPILHLYDIRNAAGPVHSQLQGHVESNTGTC 421          
BLAST of mRNA_H-paniculata_contig24666.6686.1 vs. uniprot
Match: A0A7S4A9E7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A9E7_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.200e-6
Identity = 51/166 (30.72%), Postives = 73/166 (43.98%), Query Frame = 0
Query:   17 LHPTRK-----GIFAMDTRGGTV---------ATGSKDATVAIAFLTPTGLRLDRVLGDAGGSERFHEKVIKGVDIRD---NMVASCGDDSNVRVSDIRECSNGNFGVSH----RLDRVHAGACHTVRWHPGDDNLLLTAGLDSTVKLFDLRRPEVAVHVFRGHCP 161
            LH T K     GIF MD    +V          TGSKD ++AI+ L    L             RFH   +  V ++    +++AS  DD  V + D R    G+   S     +L+  H    H+V W P ++ +L+TAGLD  VK++D R     +    GH P
Sbjct:  124 LHRTGKEYHSSGIFCMDVLSSSVNSSSSEMMICTGSKDKSIAISSLAS--LATSSTATKPTWRSRFHNAKVGAVKLQSPTSSLLASASDDGIVALHDFRTNGLGSGSSSSSLVSKLEDAHDRP-HSVVWDPCNEFILVTAGLDPIVKVWDHRNLSEPIVSLEGHVP 286          
BLAST of mRNA_H-paniculata_contig24666.6686.1 vs. uniprot
Match: A0A7S2RLP2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLP2_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 1.320e-5
Identity = 25/49 (51.02%), Postives = 30/49 (61.22%), Query Frame = 0
Query:  120 HTVRWHPGDDNLLLTAGLDSTVKLFDLRRPEVAVHVFRGHCPYALARCA 168
            H+V WHP   +LLLTAG DS V+L+DLR     +  F  H P ALA  A
Sbjct:   29 HSVEWHPCSKDLLLTAGFDSVVRLWDLRHLGAPLRCFDDHVPKALAGAA 77          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24666.6686.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KMN1_9PHAE1.320e-6975.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8U5_ECTSI2.520e-6774.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZGB7_9STRA1.020e-3753.13WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
R1CA86_EMIHU1.020e-934.84Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A448ZQL5_9STRA5.140e-832.76Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A804IRQ1_MUSAM3.800e-729.01(wild Malaysian banana) hypothetical protein n=2 T... [more]
A0A7S4A9E7_9STRA1.200e-630.72Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S2RLP2_9STRA1.320e-551.02Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 104..145
e-value: 1.3E-4
score: 31.3
coord: 52..96
e-value: 26.0
score: 8.0
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 9..172
e-value: 4.8E-20
score: 74.0
NoneNo IPR availablePANTHERPTHR22850WD40 REPEAT FAMILYcoord: 27..159
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 66..154
score: 8.756
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 28..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24666contigH-paniculata_contig24666:254..1513 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24666.6686.1mRNA_H-paniculata_contig24666.6686.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24666 254..1513 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24666.6686.1 ID=prot_H-paniculata_contig24666.6686.1|Name=mRNA_H-paniculata_contig24666.6686.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=176bp
MLVFCFARRLLCTNADLHPTRKGIFAMDTRGGTVATGSKDATVAIAFLTP
TGLRLDRVLGDAGGSERFHEKVIKGVDIRDNMVASCGDDSNVRVSDIREC
SNGNFGVSHRLDRVHAGACHTVRWHPGDDNLLLTAGLDSTVKLFDLRRPE
VAVHVFRGHCPYALARCADGSWNDT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf