prot_H-paniculata_contig24665.6685.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24665.6685.1
Unique Nameprot_H-paniculata_contig24665.6685.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length111
Homology
BLAST of mRNA_H-paniculata_contig24665.6685.1 vs. uniprot
Match: A0A6H5JPZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPZ8_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 1.530e-31
Identity = 57/64 (89.06%), Postives = 60/64 (93.75%), Query Frame = 0
Query:    1 IVEKQGIVRSSTLLAPTMLLTGHQAAIYSLKFDPSGLALASAGADRAIFLWDTRGECRNYNVLR 64
            IVEKQ I RSSTLLAPTMLLTGHQAA+Y+LKFDP+GL LASAGADRAIFLWDTRGEC NYNVLR
Sbjct:   36 IVEKQNIARSSTLLAPTMLLTGHQAAVYTLKFDPTGLQLASAGADRAIFLWDTRGECANYNVLR 99          
BLAST of mRNA_H-paniculata_contig24665.6685.1 vs. uniprot
Match: D8LBD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBD6_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 1.680e-31
Identity = 96/106 (90.57%), Postives = 100/106 (94.34%), Query Frame = 0
Query:    1 IVEKQGIVRSSTLLAPTMLLTGHQAAIYSLKFDPSGLALASAGADRAIFLWDTRGECRNYNVLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHVGKRKKTFK 106
            IVEKQ I RSSTLLAPTMLLTGHQAA+Y+LKFDP+GL LASAGADRAIFLWDTRGEC NYNVL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA+ GKRKKTFK
Sbjct:   36 IVEKQNIARSSTLLAPTMLLTGHQAAVYTLKFDPTGLQLASAGADRAIFLWDTRGECANYNVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANAGKRKKTFK 141          
BLAST of mRNA_H-paniculata_contig24665.6685.1 vs. uniprot
Match: A0A2P4WZQ6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WZQ6_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 3.680e-17
Identity = 40/56 (71.43%), Postives = 45/56 (80.36%), Query Frame = 0
Query:    9 RSSTLLAPTMLLTGHQAAIYSLKFDPSGLALASAGADRAIFLWDTRGECRNYNVLR 64
            R+S L+APTMLL+GH AA+YSLKF PSG  LAS+  DR I LWD  GECRNYNVLR
Sbjct:  195 RTSGLMAPTMLLSGHSAAVYSLKFSPSGQHLASSSFDRTILLWDVYGECRNYNVLR 250          
BLAST of mRNA_H-paniculata_contig24665.6685.1 vs. uniprot
Match: A0A6A7GAE8_9CRUS (U5 small nuclear ribonucleoprotein 40 kDa protein-like (Fragment) n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GAE8_9CRUS)

HSP 1 Score: 84.0 bits (206), Expect = 6.640e-17
Identity = 39/62 (62.90%), Postives = 48/62 (77.42%), Query Frame = 0
Query:    3 EKQGIVRSSTLLAPTMLLTGHQAAIYSLKFDPSGLALASAGADRAIFLWDTRGECRNYNVLR 64
            EK G++R+STL APTMLLTGHQA IY+ KF PSG  LASAG D+ IFLW+  G+CRN  + +
Sbjct:   31 EKTGVMRTSTLHAPTMLLTGHQAQIYTTKFGPSGRLLASAGHDKNIFLWEVYGKCRNLGLFQ 92          
BLAST of mRNA_H-paniculata_contig24665.6685.1 vs. uniprot
Match: A0A7S2XUZ9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUZ9_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.530e-16
Identity = 37/56 (66.07%), Postives = 44/56 (78.57%), Query Frame = 0
Query:    9 RSSTLLAPTMLLTGHQAAIYSLKFDPSGLALASAGADRAIFLWDTRGECRNYNVLR 64
            R+S L++PTM+LTGHQAA+YSL+FDPSG  LAS   D+ I LW   GEC NYNVLR
Sbjct:   42 RTSNLMSPTMMLTGHQAAVYSLQFDPSGQNLASGSFDKTIMLWSVYGECTNYNVLR 97          
BLAST of mRNA_H-paniculata_contig24665.6685.1 vs. uniprot
Match: A0A5D6XQN3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQN3_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.920e-16
Identity = 39/55 (70.91%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    9 RSSTLLAPTMLLTGHQAAIYSLKFDPSGLALASAGADRAIFLWDTRGECRNYNVL 63
            R+S L APT+LLTGH AA+YSLKFD SG   ASA  DR+I LWD  GECRNYNVL
Sbjct:   60 RTSALAAPTLLLTGHSAAVYSLKFDASGQHAASASFDRSILLWDVYGECRNYNVL 114          
BLAST of mRNA_H-paniculata_contig24665.6685.1 vs. uniprot
Match: K3X9U2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9U2_GLOUD)

HSP 1 Score: 82.0 bits (201), Expect = 3.910e-16
Identity = 38/54 (70.37%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    9 RSSTLLAPTMLLTGHQAAIYSLKFDPSGLALASAGADRAIFLWDTRGECRNYNV 62
            R+S L APTMLLTGH AA+YSLKFDPSG   AS+  DR+I LWD  GECRNYN+
Sbjct:   55 RTSGLAAPTMLLTGHSAAVYSLKFDPSGQHAASSSFDRSILLWDVYGECRNYNM 108          
BLAST of mRNA_H-paniculata_contig24665.6685.1 vs. uniprot
Match: A0A507C0F7_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C0F7_9FUNG)

HSP 1 Score: 81.6 bits (200), Expect = 4.780e-16
Identity = 38/63 (60.32%), Postives = 45/63 (71.43%), Query Frame = 0
Query:    2 VEKQGIVRSSTLLAPTMLLTGHQAAIYSLKFDPSGLALASAGADRAIFLWDTRGECRNYNVLR 64
            V +Q I R+S L+AP M LTGHQ  I+S KF P G  +AS   DR IFLWDT GEC+NYNVL+
Sbjct:   30 VSEQKIARTSDLMAPIMQLTGHQGEIFSCKFSPDGQHIASGSFDRDIFLWDTYGECKNYNVLK 92          
BLAST of mRNA_H-paniculata_contig24665.6685.1 vs. uniprot
Match: M4BWC5_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BWC5_HYAAE)

HSP 1 Score: 81.6 bits (200), Expect = 5.330e-16
Identity = 38/54 (70.37%), Postives = 44/54 (81.48%), Query Frame = 0
Query:    9 RSSTLLAPTMLLTGHQAAIYSLKFDPSGLALASAGADRAIFLWDTRGECRNYNV 62
            R+S LLAPTMLL+GH AA+YSLKF PSG  LAS+  DR+I LW+  GECRNYNV
Sbjct:   53 RTSKLLAPTMLLSGHSAAVYSLKFSPSGQHLASSSFDRSILLWNVYGECRNYNV 106          
BLAST of mRNA_H-paniculata_contig24665.6685.1 vs. uniprot
Match: A0A484EFI7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EFI7_BRELC)

HSP 1 Score: 79.3 bits (194), Expect = 3.610e-15
Identity = 36/54 (66.67%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    9 RSSTLLAPTMLLTGHQAAIYSLKFDPSGLALASAGADRAIFLWDTRGECRNYNV 62
            R+S L+APTMLL+GH AA+YSLKF PSG  +AS   DR+I LWD  GECRN+NV
Sbjct:   49 RTSGLMAPTMLLSGHNAAVYSLKFSPSGQHVASCSFDRSILLWDVYGECRNFNV 102          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24665.6685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPZ8_9PHAE1.530e-3189.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBD6_ECTSI1.680e-3190.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2P4WZQ6_9STRA3.680e-1771.43Uncharacterized protein n=2 Tax=Phytophthora palmi... [more]
A0A6A7GAE8_9CRUS6.640e-1762.90U5 small nuclear ribonucleoprotein 40 kDa protein-... [more]
A0A7S2XUZ9_9STRA2.530e-1666.07Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A5D6XQN3_9STRA2.920e-1670.91Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3X9U2_GLOUD3.910e-1670.37Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A507C0F7_9FUNG4.780e-1660.32Uncharacterized protein n=1 Tax=Synchytrium microb... [more]
M4BWC5_HYAAE5.330e-1670.37Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A484EFI7_BRELC3.610e-1566.67Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 56..95
e-value: 9.7E-6
score: 35.1
coord: 13..52
e-value: 2.1E-6
score: 37.2
IPR001680WD40 repeatPFAMPF00400WD40coord: 61..95
e-value: 2.9E-5
score: 24.7
coord: 18..52
e-value: 9.4E-6
score: 26.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 63..104
score: 14.585
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 20..54
score: 14.686
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 16..110
e-value: 3.3E-25
score: 90.5
NoneNo IPR availablePANTHERPTHR44006:SF1U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 40 KDA PROTEINcoord: 7..106
NoneNo IPR availablePANTHERPTHR44006FAMILY NOT NAMEDcoord: 7..106
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 39..53
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 20..104
score: 23.045
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 18..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24665contigH-paniculata_contig24665:174..1146 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24665.6685.1mRNA_H-paniculata_contig24665.6685.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24665 174..1146 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24665.6685.1 ID=prot_H-paniculata_contig24665.6685.1|Name=mRNA_H-paniculata_contig24665.6685.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=111bp
IVEKQGIVRSSTLLAPTMLLTGHQAAIYSLKFDPSGLALASAGADRAIFL
WDTRGECRNYNVLRGHKNAILELHWSPNNPTIVTASADKTLGYWDAHVGK
RKKTFKVREN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf