prot_H-paniculata_contig2444.6619.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig2444.6619.1
Unique Name	prot_H-paniculata_contig2444.6619.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	239

Homology

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BLAST of mRNA_H-paniculata_contig2444.6619.1 vs. uniprot
Match: D7FSV5_ECTSI (Fatty acid desaturase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSV5_ECTSI)

HSP 1 Score: 369 bits (946), Expect = 4.660e-124
Identity = 186/248 (75.00%), Postives = 202/248 (81.45%), Query Frame = 0

Query:    9 AFTFSALPSVRHAPS------NRRSST--------SMVASVSKVGSVGAPTTAPSTGVGAG----KRLHVQLGDAFYDLTGWRKLHPAGNHWIDRFAERDATDVMAAFHSDEAFDRLKTLPVVRGKEAVEPNAVTKKFRAFRKELVEAGWFKRIWYKDAFLLASQLGTFAAGIILTRTNPWLGVMVLALAHTTGGWYAHDMVHGRGKFCNAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIM 238
            AFT +A+PS   A S      +RRS          SMV SV        P T P TG  AG    +RLHVQLGDAFYDLTGWRKLHPAGNHWIDR+AERDATDVMAAFHSD+AFDRLKTLP V+GKE VEPN+VTK FRAFRKELVEAGWFKRIWYKDA ++A Q+GTFAAGI+L+RTNPWLGV+V+ LAHTTGGW AHDMVHGRGKFC+AMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIM
Sbjct:   20 AFTLNAVPSSSAAMSTSSGRGHRRSRACSASRQQPSMVTSV--------PRTVPETGTKAGAASKQRLHVQLGDAFYDLTGWRKLHPAGNHWIDRYAERDATDVMAAFHSDDAFDRLKTLPKVKGKEIVEPNSVTKNFRAFRKELVEAGWFKRIWYKDASIVALQVGTFAAGIVLSRTNPWLGVVVMGLAHTTGGWLAHDMVHGRGKFCSAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIM 259

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BLAST of mRNA_H-paniculata_contig2444.6619.1 vs. uniprot
Match: D7G2Y4_ECTSI (Fatty acid desaturase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y4_ECTSI)

HSP 1 Score: 328 bits (840), Expect = 1.440e-108
Identity = 142/182 (78.02%), Postives = 164/182 (90.11%), Query Frame = 0

Query:   58 LHVQLGDAFYDLTGWRKLHPAGNHWIDRFAERDATDVMAAFHSDEAFDRLKTLPVVRGKEAVEPNAVTKKFRAFRKELVEAGWFKRIWYKDAFLLASQLGTFAAGIILTRTNPWLGVMVLALAHTTGGWYAHDMVHGRGKFCNAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIMV 239
            +  QLGD+FYDLTGWRKLHP+G HWIDRFAERDATDVMAAFHSD+AFDRLKTLPVV+GK  VEP+ VTK +RAFRKELV+AGWF R+WYKDA +LA QLG FAAG+++TR NPWLG +V+ +AHTTGGW AHDMVHGRG++C AMRHYGA+ CGLSS+WWSEKHNLHHAFTNV+G DEDI+V
Sbjct:   22 IKPQLGDSFYDLTGWRKLHPSGEHWIDRFAERDATDVMAAFHSDDAFDRLKTLPVVKGKAGVEPDDVTKNYRAFRKELVDAGWFDRVWYKDASVLALQLGAFAAGVLVTRVNPWLGTLVMGMAHTTGGWLAHDMVHGRGRYCTAMRHYGALMCGLSSRWWSEKHNLHHAFTNVIGADEDIIV 203

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BLAST of mRNA_H-paniculata_contig2444.6619.1 vs. uniprot
Match: A0A836CAU7_9STRA (Fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAU7_9STRA)

HSP 1 Score: 256 bits (653), Expect = 3.950e-80
Identity = 120/197 (60.91%), Postives = 144/197 (73.10%), Query Frame = 0

Query:   44 PTTAPSTGVGAGKRLHVQLGDAFYDLTGWRKLHPAGNHWIDRFAERDATDVMAAFHSDEAFDRLKTLPVVRGKEAVEPNAVTKKFRAFRKELVEAGWFKRIWYKDAFLLASQLGTFAAGIILTRTNPWL-GVMVLALAHTTGGWYAHDMVHGRGKFCNAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIMV 239
            P  AP+       RLHVQ+G+A YDLTGWR  HPAG+HWIDRF ++DATDV+ AFHSDEA    + LP  RG EAVEP+A T KFR  R +LV  GWFKR W  +AFLL +Q+  FA G+ L R+   L G  VL +AHTT GW AHD +HGRGK+ + MR++G +T GL +KWWSEKHNLHHAFTN+VGVDEDIMV
Sbjct:   43 PVAAPAVAAPKKNRLHVQIGNAVYDLTGWRAKHPAGSHWIDRFHQKDATDVIYAFHSDEAMQMFERLPRARGVEAVEPDATTLKFRELRAKLVADGWFKREWQHEAFLLVAQMTQFAVGVALARSGHVLAGTCVLGVAHTTCGWLAHDFIHGRGKWPSFMRYFGCLTVGLGAKWWSEKHNLHHAFTNLVGVDEDIMV 239

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BLAST of mRNA_H-paniculata_contig2444.6619.1 vs. uniprot
Match: A0A6U1MJH9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MJH9_9STRA)

HSP 1 Score: 207 bits (528), Expect = 2.950e-61
Identity = 97/183 (53.01%), Postives = 122/183 (66.67%), Query Frame = 0

Query:   57 RLHVQLGDAFYDLTGWRKLHPAGNHWIDRFAERDATDVMAAFHSDEAFDRLKTLPVVRGKEAVEPNAVTKKFRAFRKELVEAGWFKRIWYKDAFLLASQLGTFAAGIILTRTNPWLGVMVLALAHTTGGWYAHDMVHGRGKFCNAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIMV 239
            RL V L   +YDLT WR  HPAG HWIDR   +DATDVM AFHS+EA    + LP  +G+E    +  T +FR FR +LV  GWFKR W ++A +L   L T A  + L +    LG++ L +   TGGW +HD VHGRG +C  MR++G ++ GLS KWWSEKHN HHA+TNV+GVDEDIMV
Sbjct:   62 RLEVALDGVWYDLTRWRSSHPAGEHWIDRMNGKDATDVMTAFHSEEAMKMFQGLPKAQGREDPVVDQTTLEFRKFRAQLVADGWFKRNWVQEAKVLGLWLTTCAVSVWLAKVCAPLGLIGLGIVSATGGWLSHDYVHGRGPWCTFMRNFGCLSIGLSPKWWSEKHNKHHAWTNVIGVDEDIMV 244

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BLAST of mRNA_H-paniculata_contig2444.6619.1 vs. uniprot
Match: A0A0M0JBD4_9EUKA (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JBD4_9EUKA)

HSP 1 Score: 201 bits (511), Expect = 4.590e-58
Identity = 107/215 (49.77%), Postives = 130/215 (60.47%), Query Frame = 0

Query:   40 SVGAPT-TAPSTGVGA-------GKR------LHVQLGDAFYDLTGWRKLHPAGNHWIDRFAERDATDVMAAFHSDEAFDRLKTLPVVR--GKEAVEPNAVTKKFRAFRKELVEAGWFKRIWYKDAFLLASQLGTFAAGIILTRTNPWLGVMVLALAHTTGGWYAHDMVHGRGKFCNAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIM 238
            S  APT TAP++G  A       G+R      L ++L   +YDL  WR  HP G HWID FA RDATDV  AFHS +A    K LP +R        P+ +T  FR  R ELV  GW++R+W+++A  L   L  FA G  L R  PWL  ++LAL  T+ GW AHD VHGRG+FC  MR +GA+  G S+ WWS KHNLHHA TN VGVDEDIM
Sbjct:   89 SAAAPTATAPASGSAAASVADVQGRRGAARESLPLRLDGEWYDLHAWRAAHPGGTHWIDGFAHRDATDVFHAFHSADATAMTKRLPRLRMPPPSLPPPSDLTLSFRRLRDELVREGWYERVWWREAANLTPVLALFAIGSHLARPMPWLATVLLALGSTSAGWVAHDFVHGRGRFCATMRGFGALFNGHSATWWSNKHNLHHACTNQVGVDEDIM 303

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BLAST of mRNA_H-paniculata_contig2444.6619.1 vs. uniprot
Match: A0A6H5JY43_9PHAE (FA_desaturase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY43_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 2.550e-55
Identity = 77/103 (74.76%), Postives = 91/103 (88.35%), Query Frame = 0

Query:  137 EAGWFKRIWYKDAFLLASQLGTFAAGIILTRTNPWLGVMVLALAHTTGGWYAHDMVHGRGKFCNAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIMV 239
            +AGWF R+WYKDA +LA QLG FAAG+++TR NPWLG +V+ +AHTTGGW AHDMVHGRG +C AMRHYGA+ CGLSS+WWSEKHNLHHAFTNV+G DEDI+V
Sbjct:    8 DAGWFDRVWYKDASVLALQLGAFAAGVLVTRVNPWLGTLVMGIAHTTGGWLAHDMVHGRGGYCTAMRHYGALMCGLSSRWWSEKHNLHHAFTNVIGADEDIIV 110

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BLAST of mRNA_H-paniculata_contig2444.6619.1 vs. uniprot
Match: A0A6V2NBU4_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6V2NBU4_EMIHU)

HSP 1 Score: 191 bits (486), Expect = 1.150e-54
Identity = 97/187 (51.87%), Postives = 119/187 (63.64%), Query Frame = 0

Query:   58 LHVQLGDAFYDLTGWRKLHPAGNHWIDRFAERDATDVMAAFHSDEAFDRLKTLPVVRGKEAVEP------NAVTKKFRAFRKELVEAGWFKRIWYKDAFLLASQLGTFAAGIILTRTNPWLGVMVLALAHTTGGWYAHDMVHGRGKFCNAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIM 238
            L V++   ++DL  WR  HPAG HW+D FA RDATDVM AFHS++A   L  LP  R   AV+P      +A+T  FR  R  LV  GW++R+W+++A  L   L  +  G  L R  P L  + LAL  T+ GW AHD VHGRG+FC AMR +GA+  G SS WWS KHNLHHA TN VGVDEDIM
Sbjct:  230 LPVRIDGEWFDLRRWRATHPAGVHWLDGFAGRDATDVMHAFHSEDAVAMLSRLP--RLSAAVQPPSLPPASALTLGFRRLRARLVAEGWYERLWWREAQNLLPCLACYGVGWRLARAAPLLATVSLALGSTSAGWIAHDFVHGRGRFCAAMRGFGALMNGHSSTWWSNKHNLHHACTNQVGVDEDIM 414

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BLAST of mRNA_H-paniculata_contig2444.6619.1 vs. uniprot
Match: L1IL22_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IL22_GUITC)

HSP 1 Score: 187 bits (475), Expect = 4.540e-54
Identity = 93/188 (49.47%), Postives = 123/188 (65.43%), Query Frame = 0

Query:   57 RLHVQLGDAFYDLTGWRKLHPAGNHWIDRFAERDATDVMAAFHSDEAFDRLKTLPVVRG-KEAV-EPNAVTKKFRAFRKELVEAGWFKRIWYKDAFLLASQLGTFAAGII-----LTRTNPWLGVMVLALAHTTGGWYAHDMVHGRGKFCNAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDI 237
            +L V++ D +YDL+ WRK HPAG HWID + ++DAT+VM  FHSD+  + LK LP  +   E V EP++ T  FR FRK+LV+ GWF+R W  +AF L S    FAA ++     L R  P     VL +++T  GW +HD VHGRGKF + MR +G +  G+   WWS+KHNLHHA TN VG+DEDI
Sbjct:    3 QLRVRIDDVWYDLSRWRKAHPAGTHWIDLYRDQDATEVMYGFHSDKGMEMLKRLPKAKTVPEGVKEPSSATMNFRKFRKQLVDDGWFERDWAHEAFNLGSW--AFAAAMVRCPYTLKRCIPVTLSQVLGVSNTIAGWLSHDYVHGRGKFADFMRPFGYLCGGMGPTWWSDKHNLHHARTNEVGIDEDI 188

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BLAST of mRNA_H-paniculata_contig2444.6619.1 vs. uniprot
Match: A0A7S3RVU0_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RVU0_EMIHU)

HSP 1 Score: 191 bits (486), Expect = 2.010e-53
Identity = 97/187 (51.87%), Postives = 119/187 (63.64%), Query Frame = 0

Query:   58 LHVQLGDAFYDLTGWRKLHPAGNHWIDRFAERDATDVMAAFHSDEAFDRLKTLPVVRGKEAVEP------NAVTKKFRAFRKELVEAGWFKRIWYKDAFLLASQLGTFAAGIILTRTNPWLGVMVLALAHTTGGWYAHDMVHGRGKFCNAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIM 238
            L V++   ++DL  WR  HPAG HW+D FA RDATDVM AFHS++A   L  LP  R   AV+P      +A+T  FR  R  LV  GW++R+W+++A  L   L  +  G  L R  P L  + LAL  T+ GW AHD VHGRG+FC AMR +GA+  G SS WWS KHNLHHA TN VGVDEDIM
Sbjct:  230 LPVRIDGEWFDLRRWRATHPAGVHWLDGFAGRDATDVMHAFHSEDAVAMLSRLP--RLSAAVQPPSLPPASALTLGFRRLRARLVAEGWYERLWWREAQNLLPCLACYGVGWRLARAAPLLATVSLALGSTSAGWIAHDFVHGRGRFCAAMRGFGALMNGHSSTWWSNKHNLHHACTNQVGVDEDIM 414

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BLAST of mRNA_H-paniculata_contig2444.6619.1 vs. uniprot
Match: A0A7S2AXE7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AXE7_9STRA)

HSP 1 Score: 186 bits (472), Expect = 1.430e-52
Identity = 89/190 (46.84%), Postives = 121/190 (63.68%), Query Frame = 0

Query:   57 RLHVQLGDAFYDLTGWRKLHPAGNHWIDRFAERDATDVMAAFHSDEAFDRLKTLPVVR------GKEA-VEPNAVTKKFRAFRKELVEAGWFKRIWYKDAFLLASQLGTFAAGIILTRTNPWLGVMVLALAHTTGGWYAHDMVHGRGKFCNAMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIMV 239
            RL V++ D +YDLTGWRK HP+G+HWID +   DAT+VM AFHSD A   L  LP  R      G++A ++ + V++ FRA R +L E GWFKR  + +A  L              R N  +  ++L +A+T+ GW AHD +HGRGK+   MR +G +  G+S+ WWS+KHNLHHA TNV G+DED+MV
Sbjct:   97 RLVVRMDDEWYDLTGWRKAHPSGSHWIDLYNNADATEVMYAFHSDTARKMLPRLPKARPNEIPTGEDAPIDVSPVSRGFRALRVKLEEEGWFKRKAWPEAKNLIKWTALMGVAAAFARRNTLISALLLGIANTSAGWLAHDYIHGRGKWAMTMRAFGMLGGGMSATWWSDKHNLHHALTNVAGIDEDLMV 286

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig2444.6619.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig2444.6619.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FSV5_ECTSI	4.660e-124	75.00	Fatty acid desaturase n=2 Tax=Ectocarpus TaxID=287...	[more]
D7G2Y4_ECTSI	1.440e-108	78.02	Fatty acid desaturase n=1 Tax=Ectocarpus siliculos...	[more]
A0A836CAU7_9STRA	3.950e-80	60.91	Fatty acid desaturase n=1 Tax=Tribonema minus TaxI...	[more]
A0A6U1MJH9_9STRA	2.950e-61	53.01	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A0M0JBD4_9EUKA	4.590e-58	49.77	Cytochrome b5 heme-binding domain-containing prote...	[more]
A0A6H5JY43_9PHAE	2.550e-55	74.76	FA_desaturase domain-containing protein n=1 Tax=Ec...	[more]
A0A6V2NBU4_EMIHU	1.150e-54	51.87	Hypothetical protein n=1 Tax=Emiliania huxleyi Tax...	[more]
L1IL22_GUITC	4.540e-54	49.47	Uncharacterized protein (Fragment) n=1 Tax=Guillar...	[more]
A0A7S3RVU0_EMIHU	2.010e-53	51.87	Hypothetical protein n=1 Tax=Emiliania huxleyi Tax...	[more]
A0A7S2AXE7_9STRA	1.430e-52	46.84	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036400	Cytochrome b5-like heme/steroid binding domain superfamily	GENE3D	3.10.120.10		coord: 54..114 e-value: 2.3E-6 score: 29.4
IPR036400	Cytochrome b5-like heme/steroid binding domain superfamily	SUPERFAMILY	55856	Cytochrome b5-like heme/steroid binding domain	coord: 56..112
IPR005804	Fatty acid desaturase domain	PFAM	PF00487	FA_desaturase	coord: 171..236 e-value: 1.4E-7 score: 31.6
IPR001199	Cytochrome b5-like heme/steroid binding domain	PFAM	PF00173	Cyt-b5	coord: 66..108 e-value: 2.7E-7 score: 30.7
None	No IPR available	PANTHER	PTHR19353	FATTY ACID DESATURASE 2	coord: 57..238
None	No IPR available	PANTHER	PTHR19353:SF17	DELTA(12) FATTY ACID DESATURASE FAT-2	coord: 57..238
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..148
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 166..170
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 171..188
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 189..239
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 149..165

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig2444	contig	H-paniculata_contig2444:14533..20943 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig2444.6619.1	mRNA_H-paniculata_contig2444.6619.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig2444 14533..20943 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig2444.6619.1 ID=prot_H-paniculata_contig2444.6619.1|Name=mRNA_H-paniculata_contig2444.6619.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=239bp
AAAATGCEAFTFSALPSVRHAPSNRRSSTSMVASVSKVGSVGAPTTAPST
GVGAGKRLHVQLGDAFYDLTGWRKLHPAGNHWIDRFAERDATDVMAAFHS
DEAFDRLKTLPVVRGKEAVEPNAVTKKFRAFRKELVEAGWFKRIWYKDAF
LLASQLGTFAAGIILTRTNPWLGVMVLALAHTTGGWYAHDMVHGRGKFCN
AMRHYGAVTCGLSSKWWSEKHNLHHAFTNVVGVDEDIMV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036400	Cyt_B5-like_heme/steroid_sf
IPR005804	FA_desaturase_dom
IPR001199	Cyt_B5-like_heme/steroid-bd