prot_H-paniculata_contig2441.6611.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2441.6611.1
Unique Nameprot_H-paniculata_contig2441.6611.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length849
Homology
BLAST of mRNA_H-paniculata_contig2441.6611.1 vs. uniprot
Match: D7FZQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ3_ECTSI)

HSP 1 Score: 317 bits (812), Expect = 2.450e-96
Identity = 170/301 (56.48%), Postives = 209/301 (69.44%), Query Frame = 0
Query:  162 SDMSPGAAKLNLYHVSRPEPRARWVFNLSHGTDKHVKRVSESPSSVLSSLTSTVDESRPSLGGLVWINATLGG-HCCLEKGTKSKIVTDIPTAVLDGWLNGQTGYWWLGALKEGHRTMWDSHIVMSWAMVFIPSFPELAAKNNMEVWRDKCLKGSLRVARPGELARKVADIVADDEDAEPESVVHTHLCVLLAEGDDLDLKRPRMLGTTMRADLMKTGTFM-----STGGASADVQRALTKSVGNMDSSTRSKELTTGTGLQERDGGMTYEEALDRVERYRDRIRALKEDRQSKKAMIARL 456
            S  +P    L LYHVSRPEPRARWVFNLS    KH       P     ++TST+D+ RP+LGGLVW+NA  G  HCCL+KG K+K VT +P  VLDGWLNGQTG WW+GALKEGHR +WDSH+VM+WAMVFIPS PE+AAKNNMEVW DKCL GSLRVARPGEL RK+ DIVADD+D EP  VVHTHLC+LLAEGDDL+LKRPRM  +       +T T       S   +S D+  +L K+        R+ + + G        G+  EEAL++V +YR+RI  LK+DR++KKA++ +L
Sbjct:   72 SPQAPVQPNLLLYHVSRPEPRARWVFNLS----KHTNVTDSGPPP--ETITSTIDKKRPNLGGLVWVNAVAGSLHCCLQKGVKNKAVTPVPANVLDGWLNGQTGLWWIGALKEGHRALWDSHVVMNWAMVFIPSSPEIAAKNNMEVWHDKCLPGSLRVARPGELTRKILDIVADDQDKEPSQVVHTHLCILLAEGDDLELKRPRMFSSVTTPSPGETPTSKKALSHSRSISSFDLGPSLEKN-----GLARAGDASLGAITNRNVAGI--EEALEKVAKYRERIVILKDDRRAKKALMDQL 359          
BLAST of mRNA_H-paniculata_contig2441.6611.1 vs. uniprot
Match: A0A6H5L5X5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5X5_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 7.820e-48
Identity = 182/517 (35.20%), Postives = 235/517 (45.45%), Query Frame = 0
Query:  304 MEVWRDKCLKGSLRVARPGELARKVADIVADDEDAEPESVVHTHLCVLLAEGDDLDLKRPRMLGTTMRAD-----LMKTGTFMSTGGASADVQRALTKSVGNMDSSTRSKELTTGTGLQERDGGMTYEEALDRVERYRDRIRALKEDRQSKKAMIARLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKRETIPAITADHAEQLQFDVERLRRERDDARAEAMRWLEQEKSKLE-----------AAAQEAALADHTQRSLGLGGXXXXSIHSSSNGHHE--------------GGKRDSAG-------------KAAAAIAKLRAKVERLRKERDEAEEQAAKWLNEQQAKLKKQLAAAAADELQSNSDF----------------------GGGGMTTDGVDYGDGLGGAAVAHLRAESLKLREELEASRKEANMLKEKAAVNRDLGELTKIATLNGVENGGGGGGFTELSFTDSANPEEASAQAKKALGQLLGKALDLLSPKAAA 755
            MEVW DKCL GSLRVARPGEL RK+ DIVADD+D EP  VVHTHLC+LLAEGDDL+LKRPRM  +            K     S   +  D+ ++L K+        R  + + G        G+  EEAL++V +YR+RI  LKEDR++KKA++ +L                                      L+R+                V+RLRRER+ ARA+AMRWLEQ+ +              A   E +  +  +   G GG     I   + G  E              GG     G             KAAA IAKL+ KV RLR+ERD+AE QA+ WL  +Q ++           L SNS                        GGGG  + G        G  VA L+AESL+L++EL+ +R EA  LK+K      L      A   G   G  G G  E    D + P+EA    + ALG LLGKAL+LL P+AAA
Sbjct:    1 MEVWHDKCLPGSLRVARPGELTRKILDIVADDQDKEPSQVVHTHLCILLAEGDDLELKRPRMFSSATTPSPGEITTSKKALSHSRSISLFDLGQSLEKN-----GLARGGDASLGAITNRNVAGI--EEALEKVAKYRERIVILKEDRRAKKALVDQLRHELEEKKATLSAENERLRLERNDIKDRAQGLWVDLENLRRDA-------------KQVDRLRRERNSARADAMRWLEQQHAMSSSRSLPVGAVAGAGTAEESNGEGFEGDGGAGGGRVGGIFPQTPGPGEAGPPMMGSWAQTAPGGSMTGMGDGGMLAHQVSVDQKAAATIAKLKNKVNRLRRERDDAEVQASNWLKGEQERM----------ALNSNSGXXXXXXXXXXXSTALIEANPAAAGGGGRVSSG--------GPVVASLKAESLQLKKELQNARAEAERLKKKLGSRAGLSPNVASAGSGGSARGLVGSGQDEE--VDDSEPQEA----RLALGHLLGKALNLLDPQAAA 473          
BLAST of mRNA_H-paniculata_contig2441.6611.1 vs. uniprot
Match: A0A6H5KYF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYF6_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 1.090e-46
Identity = 86/133 (64.66%), Postives = 100/133 (75.19%), Query Frame = 0
Query:  166 PGAAKLNLYHVSRPEPRARWVFNLSHGTDKHVKRVSESPSSVLSSLTSTVDESRPSLGGLVWINATLGG-HCCLEKGTKSKIVTDIPTAVLDGWLNGQTGYWWLGALKEGHRTMWDSHIVMSWAMVFIPSFPE 297
            P    L LYHVSRPEPRARWVFNLS  T+  V      P ++    TST+D+ RP+LGGLVW+NA  G  HCCL+KG K+K VT +P  VLDGWLNGQTG WW+GALKEGHR +WDSH+VM+WAMVFIPS PE
Sbjct:  255 PAQPNLLLYHVSRPEPRARWVFNLSKPTN--VTDSGPPPETI----TSTIDKKRPNLGGLVWVNAVAGSLHCCLQKGVKNKAVTPVPANVLDGWLNGQTGLWWIGALKEGHRALWDSHVVMNWAMVFIPSSPE 381          
BLAST of mRNA_H-paniculata_contig2441.6611.1 vs. uniprot
Match: D7FZQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ2_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 5.880e-10
Identity = 67/175 (38.29%), Postives = 87/175 (49.71%), Query Frame = 0
Query:  585 KAAAAIAKLRAKVERLRKERDEAEEQAAKWLNEQQAKLKKQLAAAAADELQSNSDFGGGGMTTDGVDYGDGL----GGAAVAHLRAESLKLREELEASRKEANMLKEKAAVNRDLGELTKIATLNGVENGGGGGGFTELSFTDSANPEEASAQAKKALGQLLGKALDLLSPKAAA 755
            KAAA IAKL+ KV RLR+ERD+AE QA+ WL  +Q ++                                      GG  VA L+AESL+L++EL+ +R EA   K K A    L      A   G   G  GGG  E    D + P+EA    + ALG+LLG+AL+LL P+AAA
Sbjct:   92 KAAATIAKLKNKVNRLRRERDDAEVQASNWLKSEQERMALNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVSSGGPVVASLKAESLQLKKELQDARAEAERFKRKLASGSGLSPNVTPAGSGGFARGLVGGGQDE--GLDDSEPQEA----RLALGRLLGQALNLLDPQAAA 260          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2441.6611.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FZQ3_ECTSI2.450e-9656.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5X5_9PHAE7.820e-4835.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KYF6_9PHAE1.090e-4664.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZQ2_ECTSI5.880e-1038.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 508..553
NoneNo IPR availableCOILSCoilCoilcoord: 425..466
NoneNo IPR availableCOILSCoilCoilcoord: 471..498
NoneNo IPR availableCOILSCoilCoilcoord: 583..624
NoneNo IPR availableCOILSCoilCoilcoord: 661..692

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2441contigH-paniculata_contig2441:5004..20266 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2441.6611.1mRNA_H-paniculata_contig2441.6611.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2441 3765..20563 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2441.6611.1 ID=prot_H-paniculata_contig2441.6611.1|Name=mRNA_H-paniculata_contig2441.6611.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=849bp
MTSADLLHYWSGPSPTPSDKRQHIQQRNHRHQVIARGRSMHDEEPEHVFG
DAAGVQPDYFIVKNQDAGYNSSSGGSRGQGEQQHLVVNNGTRSRPSNGSH
YSRSSRDSPNRIIRASSSKRQSLPTSHDLRDDTVRRSQSCGPRDCSGGSA
SLSRSKHSAVSSDMSPGAAKLNLYHVSRPEPRARWVFNLSHGTDKHVKRV
SESPSSVLSSLTSTVDESRPSLGGLVWINATLGGHCCLEKGTKSKIVTDI
PTAVLDGWLNGQTGYWWLGALKEGHRTMWDSHIVMSWAMVFIPSFPELAA
KNNMEVWRDKCLKGSLRVARPGELARKVADIVADDEDAEPESVVHTHLCV
LLAEGDDLDLKRPRMLGTTMRADLMKTGTFMSTGGASADVQRALTKSVGN
MDSSTRSKELTTGTGLQERDGGMTYEEALDRVERYRDRIRALKEDRQSKK
AMIARLEDDLRQKEDVFSSESDRLRKERNDLRTRAKLLRMDLEDLKRETI
PAITADHAEQLQFDVERLRRERDDARAEAMRWLEQEKSKLEAAAQEAALA
DHTQRSLGLGGGGSGSIHSSSNGHHEGGKRDSAGKAAAAIAKLRAKVERL
RKERDEAEEQAAKWLNEQQAKLKKQLAAAAADELQSNSDFGGGGMTTDGV
DYGDGLGGAAVAHLRAESLKLREELEASRKEANMLKEKAAVNRDLGELTK
IATLNGVENGGGGGGFTELSFTDSANPEEASAQAKKALGQLLGKALDLLS
PKAAAEAAAEVAATAAANAEAAASVVAPSSGGVGNGEHLEVANGGEGGVG
NRDLEGWGQTTQMDMERQDRGTSSASSTVNNSPPATTAVAAQTPRGTV*
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