prot_H-paniculata_contig24230.6562.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24230.6562.1
Unique Nameprot_H-paniculata_contig24230.6562.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length261
Homology
BLAST of mRNA_H-paniculata_contig24230.6562.1 vs. uniprot
Match: UPI001CDB8C50 (uncharacterized protein LOC122853856 n=1 Tax=Aphidius gifuensis TaxID=684658 RepID=UPI001CDB8C50)

HSP 1 Score: 64.7 bits (156), Expect = 2.560e-8
Identity = 44/156 (28.21%), Postives = 76/156 (48.72%), Query Frame = 0
Query:  114 NSSGG--KQRKCRRCKLPGHFWYECKAR----VIPAQTQVQDASSTSGEQVSGVSVALISSSGSHNDGDEFGLETGF-ETWRSDSAATFHMTGSKEYMRD-IRPSNDQVRIGDYQLIDVECVGTLTIIFPSVNGEVTLRLEDVAYVPRLKYNLLSL 261
            N  GG  K + C  CK  GH W  C  R       A+    + + ++ E+ + +   L++SS          L  G  + W  DS A++HM+G KE+  + ++     +R+GD ++++    GT+ I   +    V + L +V ++P LKYNL S+
Sbjct:  219 NKKGGTKKDKTCTYCKKTGHLWKSCYKRKNDEADKAKQPKGEVADSTHEEGTFIHELLMASS----------LPKGLSDKWLFDSGASYHMSGRKEWFTNMVKKEKSLIRVGDGKVLETNLYGTINISVFNGESWVKMSLNNVLFIPELKYNLFSM 364          
BLAST of mRNA_H-paniculata_contig24230.6562.1 vs. uniprot
Match: UPI0010172210 (uncharacterized protein LOC114170345 n=1 Tax=Vigna unguiculata TaxID=3917 RepID=UPI0010172210)

HSP 1 Score: 58.9 bits (141), Expect = 1.210e-7
Identity = 32/79 (40.51%), Postives = 50/79 (63.29%), Query Frame = 0
Query:  183 GFETWRSDSAATFHMTGSKEYMRDIRPS-NDQVRIGDYQLIDVECVGTLTIIFPSVNGEVTLRLEDVAYVPRLKYNLLS 260
            G E W  D+  + HMTG KE++ +I  S ++++++ D  +I  E VG + I     +G+ T+ +EDV YVP +KYNLLS
Sbjct:   10 GRENWFLDTRCSNHMTGHKEWLSNIDTSRSNKIKLADDNMIRAEGVGNVVI---KKDGKETMVIEDVLYVPGIKYNLLS 85          
BLAST of mRNA_H-paniculata_contig24230.6562.1 vs. uniprot
Match: UPI00092F1DB2 (uncharacterized protein LOC109362714 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092F1DB2)

HSP 1 Score: 60.5 bits (145), Expect = 5.660e-7
Identity = 68/285 (23.86%), Postives = 122/285 (42.81%), Query Frame = 0
Query:    1 MKRGEDPMKLFARTDEIVSVLESLGQTVTESSVNRKLVRALTSDYEMEQRTILYKETVTRSEIEHVVRQ------RYMQLPKSRSVGQALVAESQLGRGFGKGKWXXXXXXXKNSNSGENSSGGKQR-----------------KCRRCKLPGHFWYECKARVIPAQTQVQDASSTSGEQVSGVSVALISSSGSHNDGDEFGLETGFETWRSDSAATFHMTGSKEYMRDIRPSN-DQVRIGDYQLIDVECVGTLTIIFPSVNGEVTLRLEDVAYVPRLKYNLLSL 261
            M+ G+   + F +   I + ++  G+ +T++ V RK++R+L   ++     I   + VT  +IE           R ++    + V QAL A  + G      KW       +   S E S    +R                 +C  C   GH+ YEC  +    Q++ ++ + T+ E      + L+ +  +     EF        W  DS  + HMT  KE+++D   +N  +V+  D   +  +  G + I+    NG   + + +V YVP++KYNLLS+
Sbjct:   37 MEEGDKVGEYFTKILTITNQMKGYGEAITDTMVIRKIMRSLLPRFDFIVVAIEESKDVTLMKIEEKQSSLEAHELRLIERNPMKKVEQALKAIHKDGDRRKDKKWKGKQSLNRRKTSQEWSESSDKRGRSKLNYNQKKFDKSKVECFNCHKLGHYSYEC-GKEKNKQSRHKEEALTTQEDSDSEPLNLMVTDAATKSHSEF--------WYLDSGCSNHMTNHKEWLKDFDSTNRSRVKFADDSSLSAKGAGNVVIM--RENGSKAI-VSNVLYVPKMKYNLLSI 309          
BLAST of mRNA_H-paniculata_contig24230.6562.1 vs. uniprot
Match: A0A6D2J390_9BRAS (CCHC-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2J390_9BRAS)

HSP 1 Score: 57.0 bits (136), Expect = 9.600e-6
Identity = 44/145 (30.34%), Postives = 71/145 (48.97%), Query Frame = 0
Query:  123 CRRCKLPGHFWYECKARVIP-----AQTQVQDASSTSGEQVSGVSVALISSSGSHNDGDEFGLETGFETWRSDSAATFHMTGSKEYMRDIRPS-NDQVRIGDYQLIDVECVGTLTIIFPSVNGEVTLRLEDVAYVPRLKYNLLSL 261
            C RC   GH+  +C  R++      AQ    +  +   E++    V ++          E   + G   W  D+ A+ HMTG++ Y ++I  S   +VR GD   +D++  G+  I+F S NGE  + L DV ++P LK N+ SL
Sbjct:  224 CYRCDKYGHYASDCPDRLLKLKLQEAQENEDNNDTQEAEKLMMHEVVMLKERNVKQKDFEANSD-GDNVWYLDNGASNHMTGNRNYFKEIDESMTGKVRFGDDSRLDIKGKGS--ILFYSKNGEKKM-LADVYFIPELKSNITSL 364          
BLAST of mRNA_H-paniculata_contig24230.6562.1 vs. uniprot
Match: UPI00092E79E4 (uncharacterized protein LOC109352893 n=2 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092E79E4)

HSP 1 Score: 56.2 bits (134), Expect = 1.700e-5
Identity = 61/283 (21.55%), Postives = 118/283 (41.70%), Query Frame = 0
Query:    1 MKRGEDPMKLFARTDEIVSVLESLGQTVTESSVNRKLVRALTSDYEMEQRTILYKETVTRSEIEHVVRQ------RYMQLPKSRSVGQALVAESQLGRGFGKGKWXXXXXXXKNSNSGENSSGGKQR---------------KCRRCKLPGHFWYECKARVIPAQTQVQDASSTSGEQVSGVSVALISSSGSHNDGDEFGLETGFETWRSDSAATFHMTGSKEYMRDIRPSN-DQVRIGDYQLIDVECVGTLTIIFPSVNGEVTLRLEDVAYVPRLKYNLLSL 261
            M+ G+   + F +   I + ++  G+ +T++ +  K++R+L   ++     I   + VT  +IE +         R ++    +   QAL A  +        +W       +   S E S    +R               +C  C   GH+ YEC           ++A +T  +  S     +++++ + +           E W  DS  + HMT  KE+++D   +   +V+  D   +  E  G++ I+    NG   + + +V YVP++KYNLLS+
Sbjct:  106 MEEGDKVGEYFTKILTITNQMKGYGEAITDTMIIEKIMRSLLPRFDFIVVAIEESKDVTLMKIEELQSSLEAHELRLIERNPRKKAEQALKATHKDNDRRKDKRWKGKQNFNRRKTSQEWSESSDKRGRSKFNQKKFDKSKVECFNCHKLGHYSYECSNEKNKQSRHKEEALTTQEDSDSEPLNLMVTNTATRSHS---------ELWYLDSGCSNHMTNHKEWLKDFDSTKKSRVKFADDSSLSAEGAGSVVIM--RKNGSKAI-VSNVLYVPKMKYNLLSI 376          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24230.6562.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
UPI001CDB8C502.560e-828.21uncharacterized protein LOC122853856 n=1 Tax=Aphid... [more]
UPI00101722101.210e-740.51uncharacterized protein LOC114170345 n=1 Tax=Vigna... [more]
UPI00092F1DB25.660e-723.86uncharacterized protein LOC109362714 n=1 Tax=Lupin... [more]
A0A6D2J390_9BRAS9.600e-630.34CCHC-type domain-containing protein n=1 Tax=Microt... [more]
UPI00092E79E41.700e-521.55uncharacterized protein LOC109352893 n=2 Tax=Lupin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 108..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24230contigH-paniculata_contig24230:2123..2959 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24230.6562.1mRNA_H-paniculata_contig24230.6562.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24230 2123..2974 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24230.6562.1 ID=prot_H-paniculata_contig24230.6562.1|Name=mRNA_H-paniculata_contig24230.6562.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=261bp
MKRGEDPMKLFARTDEIVSVLESLGQTVTESSVNRKLVRALTSDYEMEQR
TILYKETVTRSEIEHVVRQRYMQLPKSRSVGQALVAESQLGRGFGKGKWR
GRGFGKKNSNSGENSSGGKQRKCRRCKLPGHFWYECKARVIPAQTQVQDA
SSTSGEQVSGVSVALISSSGSHNDGDEFGLETGFETWRSDSAATFHMTGS
KEYMRDIRPSNDQVRIGDYQLIDVECVGTLTIIFPSVNGEVTLRLEDVAY
VPRLKYNLLSL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036875Znf_CCHC_sf