prot_H-paniculata_contig24201.6557.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24201.6557.1
Unique Nameprot_H-paniculata_contig24201.6557.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length58
Homology
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BLAST of mRNA_H-paniculata_contig24201.6557.1 vs. uniprot
Match: A0A6H5JKK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKK0_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 3.230e-20
Identity = 44/58 (75.86%), Postives = 51/58 (87.93%), Query Frame = 0 
Query:    1 KFFAAIAYRCSPAVKMLPVRVTCKLRTAGSAVLVWAQVIANPQIAKPLSGVSVLVQLP 58
            +F  A+ YRCSPAVK+LPVRVTC+LRTAG+ VLVW QVIANPQ+ +PLSGVSVLV LP
Sbjct:  456 RFLPALMYRCSPAVKVLPVRVTCRLRTAGNRVLVWVQVIANPQLPQPLSGVSVLVNLP 513
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BLAST of mRNA_H-paniculata_contig24201.6557.1 vs. uniprot
Match: D7FGR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGR2_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 2.110e-19
Identity = 43/58 (74.14%), Postives = 50/58 (86.21%), Query Frame = 0 
Query:    1 KFFAAIAYRCSPAVKMLPVRVTCKLRTAGSAVLVWAQVIANPQIAKPLSGVSVLVQLP 58
            +F  A+ YRCSPAVK+LPVRVTC+LRTAG+ VLVW QVIANPQ++ PLSGV VLV LP
Sbjct:  530 RFLPALMYRCSPAVKVLPVRVTCRLRTAGNRVLVWVQVIANPQLSHPLSGVLVLVNLP 587
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24201.6557.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JKK0_9PHAE3.230e-2075.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FGR2_ECTSI2.110e-1974.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24201contigH-paniculata_contig24201:2911..3084 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24201.6557.1mRNA_H-paniculata_contig24201.6557.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24201 2911..3084 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24201.6557.1 ID=prot_H-paniculata_contig24201.6557.1|Name=mRNA_H-paniculata_contig24201.6557.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=58bp
KFFAAIAYRCSPAVKMLPVRVTCKLRTAGSAVLVWAQVIANPQIAKPLSG
VSVLVQLP
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