prot_H-paniculata_contig242.6552.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig242.6552.1
Unique Nameprot_H-paniculata_contig242.6552.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length224
Homology
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BLAST of mRNA_H-paniculata_contig242.6552.1 vs. uniprot
Match: D8LB75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB75_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 1.610e-37
Identity = 94/225 (41.78%), Postives = 135/225 (60.00%), Query Frame = 0 
Query:    3 DMHSGSAFEALSLDIGSFSIAPCVQDTAGAKLAVDISGKLHEMALALALKGPKPELMDTMRVGLPLQKLDLFPVPERRIILPVDMKIRYNTTVSFRADEAPEAMTTDLVGDVIATECKGAAAAGVGDGIGKETDGVDGEMQEGQDEKG---TENMAQMATPLTEDEKGENMQGPSSAGLYVETEIKLHVPSGLQIKVTDLDLSVIKCTVNSLLSSLS---ATPPA 221
            DM SGSAFEAL++ +  FS+APCVQ    +  A+   G+LHE  +A+AL+GP PEL++ +  G PL+ LDLFP+PERRIILPV MKI+Y+T V+  A +  EA T  LV D++    +   AA     + K+   V       +D+ G   T   A+     T+      +Q    +G +V+ E++LHV SGL +KVTDLD++V++    SL++SL    A PPA
Sbjct:  963 DMKSGSAFEALAVSVCDFSVAPCVQRPEASDAAIVSCGRLHETGVAIALRGPLPELLEVIHRGFPLKDLDLFPIPERRIILPVKMKIKYSTYVALTAGDTLEASTATLVTDMVQRNSESDLAAMHTADVEKQELAVTALSGGEEDQAGGGPTSAAAETDGNTTDSATASEVQ----SGWHVKMEVQLHVSSGLYVKVTDLDIAVLQGIATSLIASLGVGEAAPPA 1183
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BLAST of mRNA_H-paniculata_contig242.6552.1 vs. uniprot
Match: A0A6H5K9E5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E5_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 2.120e-35
Identity = 91/228 (39.91%), Postives = 129/228 (56.58%), Query Frame = 0 
Query:    3 DMHSGSAFEALSLDIGSFSIAPCVQDTAGAKLAVDISGKLHEMALALALKGPKPELMDTMRVGLPLQKLDLFPVPERRIILPVDMKIRYNTTVSFRADEAPEAMTTDLVGDVIATECKGAAAAGVGDGIGKETDGVDGEMQE------GQDEKGTENMAQMATPLTEDEKGENMQGPSSAGLYVETEIKLHVPSGLQIKVTDLDLSVIKCTVNSLLSSLS---ATPPA 221
            DM SGSAFEAL++ +  FS+APCVQ    +  A+   G+LHE  +A+AL+GP+PEL++ +  G PL+ LDLFP+PERRIILPV MKI+Y+T V+  A +  EA T  LV D++    +   AA            VD E Q+                        E +        + +G +V  +++LHV SGL +KVTDLD++V++    SL++SLS   A PPA
Sbjct: 1022 DMKSGSAFEALAVSVCDFSVAPCVQRLEASDAAIVSCGRLHETGVAIALRGPQPELLEVIHRGFPLKDLDLFPIPERRIILPVKMKIKYSTYVALTAGDTLEATTATLVTDMMQRNSESDLAA---------MHSVDLEQQQLAVTALSGXXXXXXXXXXXXXXXXETDGNTTDSATTRSGWHVNMDVQLHVSSGLYVKVTDLDIAVLQGIATSLMASLSVGEAAPPA 1240
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig242.6552.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB75_ECTSI1.610e-3741.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K9E5_9PHAE2.120e-3539.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig242contigH-paniculata_contig242:32246..35620 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig242.6552.1mRNA_H-paniculata_contig242.6552.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig242 32246..35636 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig242.6552.1 ID=prot_H-paniculata_contig242.6552.1|Name=mRNA_H-paniculata_contig242.6552.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=224bp
MADMHSGSAFEALSLDIGSFSIAPCVQDTAGAKLAVDISGKLHEMALALA
LKGPKPELMDTMRVGLPLQKLDLFPVPERRIILPVDMKIRYNTTVSFRAD
EAPEAMTTDLVGDVIATECKGAAAAGVGDGIGKETDGVDGEMQEGQDEKG
TENMAQMATPLTEDEKGENMQGPSSAGLYVETEIKLHVPSGLQIKVTDLD
LSVIKCTVNSLLSSLSATPPADAA
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