prot_H-paniculata_contig24091.6523.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24091.6523.1
Unique Nameprot_H-paniculata_contig24091.6523.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length431
Homology
BLAST of mRNA_H-paniculata_contig24091.6523.1 vs. uniprot
Match: D7FL89_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL89_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 1.200e-25
Identity = 109/398 (27.39%), Postives = 165/398 (41.46%), Query Frame = 0
Query:    1 WRFGVLVRVDHD----YEESRLRLDYSTDKKELVVAVWGDLTKAVAWAIICCVCTVVRKMTLQFPGLRWDASLGCPDHPEKVMGISEVQRMGDRLIDNRNICRTCRMAGKGAGILASELLEVVDMSNDAGQVLQRVVGRVSESQRANLNSCGNASSSDFQAAVHSDVDS---EVLEEMREELRSLRSSMPSMEEVKNVVEESQKTNTLETKAMMXXXXXXXXXXXXXXXXXXXXLSAQL-------RGVARKLAVLTVRI----------PSHVVLLPPRQ-NESEALREEEREERNWTKRLKTWYNESKKAGKGKIMKEFRLFFLCGHDNSLAECGLEGKGYRIEIPRTWVKKSVPFAKALLVVLNITLKSFAGLSIPIEDIAGADEQSLGKVFSSI 373
            WRFGVLV+         +   L ++YS D  E+ + V+G +  A  WA +    +V + M  +FPGLRW ASL CP H + +       R GD+L+     C  C     G G  A +LLE+VD+    G +++ V  R+ ++Q      C  A+ +      H   D+    V E++   LR  R   PS  E                + ++                    +  +L        GV  +L  L V +          P    +LPP    +   L  +E+    W KRL  W  +  K GKG   K+ RLF +C   + L  CG  G+GY I+ PRTW + SV  A  +L V+  TL + A  + P+       E++      S+
Sbjct:  742 WRFGVLVQGSLGGGMAAKTFALLIEYSHDTCEVDMEVYGSIRTAAPWAALSYGISVFQAMCSEFPGLRWRASLKCPQHEQDMQISRTATRRGDKLLHGAT-CNLCDSETGGLGAAAIDLLEMVDIRRSRGDLVRAVNRRLVKAQGRYPVLCLGATRALHPELAHRLSDAWWEGVKEDISGILRGARG--PSDGEAVASTASVASDEMARLERLVTDLQQQVGRQHQDVREQIGAVDTRLVDMIDADDGVMGRLDFLVVMMMAMRRDGFETPRRACVLPPWNFAQGHGLSAKEQAPERWVKRLGQWREDDFKQGKGVFKKKMRLFLVCAATHRLVPCGPNGQGYDIQHPRTWFRMSVSVATFVLQVVCATLAAIA--AAPLSGAGALAEETFSAALGSM 1134          
BLAST of mRNA_H-paniculata_contig24091.6523.1 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 7.120e-25
Identity = 108/398 (27.14%), Postives = 161/398 (40.45%), Query Frame = 0
Query:    1 WRFGVLVRVDHD----YEESRLRLDYSTDKKELVVAVWGDLTKAVAWAIICCVCTVVRKMTLQFPGLRWDASLGCPDHPEKVMGISEVQRMGDRLIDNRNICRTCRMAGKGAGILASELLEVVDMSNDAGQVLQRVVGRVSESQRANLNSCGNASSSDFQAAVHSDVDS---EVLEEMREELRSLRSSMPSMEEVKNVVEESQKTNTLETKAMMXXXXXXXXXXXXXXXXXXXXLSAQL-------RGVARKLAVLTVRI----------PSHVVLLPPRQ-NESEALREEEREERNWTKRLKTWYNESKKAGKGKIMKEFRLFFLCGHDNSLAECGLEGKGYRIEIPRTWVKKSVPFAKALLVVLNITLKSFAGLSIPIEDIAGADEQSLGKVFSSI 373
            WRFGVLV+             L ++YS DK E+ + V+G ++ A  WA +    +V + M  +FPGLRW A+L CP H + +       R GD+ +     C  C     G G  A  LLE+VD+     ++ Q V GR+ ++Q         A+            D+    V EEM + LR  R   P   E                + ++                    +  +L        GV  +L  L V +          P    +LPP    +   L +EE+    W KRL  W  +  K GKG    + RLF +C   + L  CG  G+GY I+ PRTW + SV  A  +L V+  TL + A  + P+       E++      S+
Sbjct:  778 WRFGVLVQGSLGGGIAARTFALVVEYSHDKCEVDMKVYGSISTAAPWAALSFGISVFQAMCSEFPGLRWRAALKCPQHEQDMQISKAATRPGDKSLFGAT-CSLCDSKTGGLGAAAMSLLEIVDVHECVDKIFQEVAGRLVQAQDRYPVLRPEAARGLHPEQAQRRFDAWWDGVKEEMGDMLRGARG--PIGGEAAGSTASVASAEVARLERLVNDLQQQVGQQHQDVRERIGAVDTRLVDMIDADDGVMGRLDFLVVMMMAMRREGFDTPRRACVLPPWDFAQGHGLSDEEQAPDCWVKRLGQWREDDFKQGKGVFKTKMRLFLVCAATHRLVPCGPNGQGYDIQHPRTWFRMSVSVATFVLQVVCATLAAIA--AAPLSGAGALAEETFSAALGSM 1170          
BLAST of mRNA_H-paniculata_contig24091.6523.1 vs. uniprot
Match: A0A6H5JME6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME6_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 2.380e-24
Identity = 99/375 (26.40%), Postives = 156/375 (41.60%), Query Frame = 0
Query:    1 WRFGVLVRVDHDYEES----RLRLDYSTDKKELVVAVWGDLTKAVAWAIICCVCTVVRKMTLQFPGLRWDASLGCPDHPEKVMGISEVQRMGDRLIDNRNICRTCRMAGKGAGILASELLEVVDMSNDAGQVLQRVVGRVSESQRA----------NLNS-----------CGNASSSDFQAAVHSDVDSEVLEEMREELRSLRSSMPSMEEVKNVVEESQKTNTLETKAMMXXXXXXXXXXXXXXXXXXXXLSAQLRGVARKLAVLTVRIPSHVVLLPPRQ-NESEALREEEREERNWTKRLKTWYNESKKAGKGKIMKEFRLFFLCGHDNSLAECGLEGKGYRIEIPRTWVKKSVPFAKALLVVLNITLKSFA 349
            WRFGVLV+ +     +     + ++YS    E+ + V+G++     WA +    + VR M   FPGLRW ASL CP+H + +   +   R GD+L+     C  C     G G  A+ELL++VD+  +  ++ + V GR  + QR             NS            G    +        DV        R ++  +   +  + ++   ++   + N  + +  +                    L A L  V  +     +  P    +LP     +S  L E E+    W KRL  W  +  K GKG   K+ RLF LC H + L  CG +G+GY I+  RTW +KS+      L V+  TL + A
Sbjct:  880 WRFGVLVQGNMGGVTAGKTFAMLVEYSHKGSEIDIKVYGNIATTAPWAALSLGISAVRVMCSAFPGLRWCASLKCPEHKQDMPISNTATRPGDKLLLEHG-CTLCSSETGGVGAAATELLQMVDVLQNRDKMFREVHGRFVDLQRQYPVLRPEKSREFNSEQARRRFETWLTGMREEAAGLLRGGGDVGESTKAGERGDISGVSDDVAKLPQLVGHLQHQLEQNQKDVRGWLGEVLEAIVDADAGAMKQREFLVAMLMKVRSE----GIDTPRQACVLPEWNFAQSHGLSEHEQTPEVWVKRLHEWREDDFKQGKGVFWKKKRLFLLCAHTHRLVPCGPKGQGYDIQQLRTWARKSISATAFALQVVCSTLAAMA 1249          
BLAST of mRNA_H-paniculata_contig24091.6523.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 8.610e-18
Identity = 110/366 (30.05%), Postives = 166/366 (45.36%), Query Frame = 0
Query:    1 WRFGVLVRVDHDYEESR----LRLDYSTDKKELVVAVWGDLTKAVAWAIICCVCTVVRKMTLQFPGLRWDASLGCPDHPEKVMGISEVQRMGDRLIDNRNICRTCRMAGKGAGILASELLEVVDMSNDAGQVLQRVVGR--VSESQRANLNSCGNASSSDFQAAVHSDVDSEVLEEMREELRSLRSSMPSMEEVKNVVEESQKTNTLETKAMMXXXXXXXXXXXXXXXXXXXXLSAQLRGVARKLAVL-TVRIPSHVV--LLPPRQNESEALREEEREERNWTKRLKTWYNESKKAGKGKIMKEFRLFFLCGHDNSLAECGLEGKGYRIEIPRTWVKKSVPFAKALLVVLNITLKSFAGLSIPIED 357
            WR+GVLV       + R    +  +YS+   EL   ++GD++ +  W  +  V + V  M + FPGLRW+ SL CP H  ++   ++V   GD+ ++ R  C  C    +G G  A +L+ +VD+  D G + + V  R  V ESQ     +C   SS+D    V                         M+EV               KA  XXXXXXXXXXXXXXXXX   L   L      LA L  ++ P++    L+  ++  S     +   +++   +L+         G GK  K+ RL FLC  D +   CG  G+GY+ +  R WVK+  P  +  +V   + L +  GL++ I D
Sbjct:  613 WRYGVLVHGGLGDLDGRGIFAVVTEYSSTNNELTAQIFGDISTSAPWVALSYVTSAVSLMLMDFPGLRWNGSLKCPQHGYEMPFATKVNCAGDKFLERR--CPRCSPQTRGLGAAAIDLIRMVDIRLDRGVIDREVKARFDVLESQYF---TCPAGSSTDEDEFVR-----------------------KMDEV---------------KAEXXXXXXXXXXXXXXXXXXAGRLDKVLESTQESLARLKNLQAPNYHYPRLVVVKEVGSHGTSSKAHGKKSMLSKLR---------GLGK--KDMRLHFLCPVDMTTVPCGYGGEGYQFQETRAWVKRVSPALQVTVVTAKVALNAVTGLNVDISD 924          
BLAST of mRNA_H-paniculata_contig24091.6523.1 vs. uniprot
Match: D7FUH6_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 3.840e-16
Identity = 66/188 (35.11%), Postives = 94/188 (50.00%), Query Frame = 0
Query:  232 LRGVARKLAVLTVRIPSHVVLLPPRQNESEALREEEREERNWTKRLKTWY----------NESKKAG---------KGKIMKEFRLFFLCGHDNSLAECGLEGKGYRIEIPRTWVKKSVPFAKALLVVLNITLKSFAGLSIPIEDIAGADEQSLGKVFSSIMEDAAETLIEQACSAGEERLDEVRATG 400
            L GVAR++A+L   IP  V +LP R      L E +R    W+  LK W           N ++K           +G + +E RLFFLCG D SLAECG +G+GY ++    WV+K+ P AK  L + +I LK   GL++  +    A   S  +  S+ +EDA    IE   S    RLD ++ +G
Sbjct:  876 LVGVAREVAILRWPIPRFVCVLPARDTR---LSESDRSFEKWSTALKEWCASKSPAKDAKNPNRKTSILGLNKPQLRGLVTRELRLFFLCGQDKSLAECGPDGQGYEVKEFLDWVRKAAPAAKIGLALASIALKVCTGLAVSTDTFEAAFGTS--EDMSAFVEDALSAGIEGTTSKAGNRLDRLQNSG 1058          
BLAST of mRNA_H-paniculata_contig24091.6523.1 vs. uniprot
Match: D7G431_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.540e-12
Identity = 44/139 (31.65%), Postives = 70/139 (50.36%), Query Frame = 0
Query:    1 WRFGVLVRVDHDYEESR----LRLDYSTDKKELVVAVWGDLTKAVAWAIICCVCTVVRKMTLQFPGLRWDASLGCPDHPEKVMGISEVQRMGDRLIDNRNICRTCRMAGKGAGILASELLEVVDMSNDAGQVLQRVVGR 135
            WR+GVLV         R    + L+YS+   +L   ++GD+     W  +  V + V  M + FPGLRW  +L CP H + ++  ++V + G+  +  R  C  C    KG G  A +LL +VD+  D G++   V+ R
Sbjct:  633 WRYGVLVHGGLGDLGGRGIFAVVLEYSSTDHKLNGQIFGDIGTPAPWVALSYVMSAVSLMLVDFPGLRWGGALKCPQHGDAMLMANKVTQAGETFLKRR--CPRCSTETKGLGAAAIDLLRMVDIRMDRGEIFDEVMER 769          
BLAST of mRNA_H-paniculata_contig24091.6523.1 vs. uniprot
Match: A0A6H5KM56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM56_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 2.520e-6
Identity = 30/88 (34.09%), Postives = 48/88 (54.55%), Query Frame = 0
Query:    1 WRFGVLVRVD-HDYEESRLR---LDYSTDKKELVVAVWGDLTKAVAWAIICCVCTVVRKMTLQFPGLRWDASLGCPDHPEKVMGISEV 84
            W++GVLV     D+E   +    L+YS+   EL   ++GD++    W  +  V + V  M + FPGLRW+ SL CP H   ++  ++V
Sbjct:  414 WQYGVLVHGGLGDFEGREIFATVLEYSSTDNELSARIFGDISTPAPWTALSYVMSAVILMLVDFPGLRWEGSLKCPQHGNAMLLANQV 501          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24091.6523.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FL89_ECTSI1.200e-2527.39LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FL98_ECTSI7.120e-2527.14LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JME6_9PHAE2.380e-2426.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZA1_ECTSI8.610e-1830.05LRR-GTPase of the ROCO family, incomplete sequence... [more]
D7FUH6_ECTSI3.840e-1635.11LRR-GTPase of the ROCO family, incomplete sequence... [more]
D7G431_ECTSI1.540e-1231.65LRR-GTPase of the ROCO family, incomplete sequence... [more]
A0A6H5KM56_9PHAE2.520e-634.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 256..283
NoneNo IPR availableCOILSCoilCoilcoord: 168..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24091contigH-paniculata_contig24091:1073..3699 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24091.6523.1mRNA_H-paniculata_contig24091.6523.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24091 1072..3699 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24091.6523.1 ID=prot_H-paniculata_contig24091.6523.1|Name=mRNA_H-paniculata_contig24091.6523.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=431bp
WRFGVLVRVDHDYEESRLRLDYSTDKKELVVAVWGDLTKAVAWAIICCVC
TVVRKMTLQFPGLRWDASLGCPDHPEKVMGISEVQRMGDRLIDNRNICRT
CRMAGKGAGILASELLEVVDMSNDAGQVLQRVVGRVSESQRANLNSCGNA
SSSDFQAAVHSDVDSEVLEEMREELRSLRSSMPSMEEVKNVVEESQKTNT
LETKAMMAEVKDVVEESQKESRRVAPHLSAQLRGVARKLAVLTVRIPSHV
VLLPPRQNESEALREEEREERNWTKRLKTWYNESKKAGKGKIMKEFRLFF
LCGHDNSLAECGLEGKGYRIEIPRTWVKKSVPFAKALLVVLNITLKSFAG
LSIPIEDIAGADEQSLGKVFSSIMEDAAETLIEQACSAGEERLDEVRATG
ENLEQSTVADGRQGVGSSNASPLAVPMETLE
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