prot_H-paniculata_contig24072.6516.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24072.6516.1
Unique Nameprot_H-paniculata_contig24072.6516.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length108
Homology
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BLAST of mRNA_H-paniculata_contig24072.6516.1 vs. uniprot
Match: D8LBX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX8_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 3.760e-21
Identity = 44/51 (86.27%), Postives = 49/51 (96.08%), Query Frame = 0 
Query:    1 MEIAAQALTFKAGELEPVFCSLTLFRIVSKIGKKGAEVELSRSGRVSETFW 51
            MEIAAQALTFK G LEPVFCSLTL+RIVS++GKKGAE++LSRSGRVSETFW
Sbjct:  149 MEIAAQALTFKVGALEPVFCSLTLYRIVSRLGKKGAEMDLSRSGRVSETFW 199
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BLAST of mRNA_H-paniculata_contig24072.6516.1 vs. uniprot
Match: D8LBX9_ECTSI (Similar to dedicator of cytokinesis n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX9_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 2.270e-8
Identity = 34/52 (65.38%), Postives = 36/52 (69.23%), Query Frame = 0 
Query:   44 GRVSETFWFDLNSGAVRRKFSYVFTRESPIGDPDGIAVLPTTSKILSGSSTR 95
            G   E F FDLNS  VRRKFSYVFTRESP G PD IA   T S  ++GSSTR
Sbjct:   40 GPKREHFRFDLNSSTVRRKFSYVFTRESPTGAPDDIA---TPSISVTGSSTR 88
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BLAST of mRNA_H-paniculata_contig24072.6516.1 vs. uniprot
Match: A0A836CP33_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP33_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 1.220e-6
Identity = 26/50 (52.00%), Postives = 34/50 (68.00%), Query Frame = 0 
Query:    1 MEIAAQALTFKAGELEPVFCSLTLFRIVSKIGKKGAEVELSRSGRVSETF 50
            +++    L F  GE EP+FCSLT++RI  K  KKG E++   SGRVSETF
Sbjct:  138 LKVDCNKLVFGVGEPEPLFCSLTMYRIEGKPTKKGFELDRRNSGRVSETF 187
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24072.6516.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LBX8_ECTSI3.760e-2186.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LBX9_ECTSI2.270e-865.38Similar to dedicator of cytokinesis n=1 Tax=Ectoca... [more]
A0A836CP33_9STRA1.220e-652.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24072contigH-paniculata_contig24072:901..3459 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24072.6516.1mRNA_H-paniculata_contig24072.6516.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24072 890..3459 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24072.6516.1 ID=prot_H-paniculata_contig24072.6516.1|Name=mRNA_H-paniculata_contig24072.6516.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=108bp
MEIAAQALTFKAGELEPVFCSLTLFRIVSKIGKKGAEVELSRSGRVSETF
WFDLNSGAVRRKFSYVFTRESPIGDPDGIAVLPTTSKILSGSSTRTSTRT
GSGGGGGG
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