prot_H-paniculata_contig2404.6508.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2404.6508.1
Unique Nameprot_H-paniculata_contig2404.6508.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1104
Homology
BLAST of mRNA_H-paniculata_contig2404.6508.1 vs. uniprot
Match: D7FPZ9_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPZ9_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 3.890e-45
Identity = 103/233 (44.21%), Postives = 128/233 (54.94%), Query Frame = 0
Query:  884 GGFAPLPISRILSEEMVRILALRRRDLHAVARDSPDLLHKAVAEACYMVDSAVSNASTHCLALCNMGRLLEGRGHPDEALLCFQEASSVHSSSAEAMCLRAANLRMKGNLEDAVFYFESALARDESHWPAWHGLGQTKAAQGMFTDAVEALSRWLEG---------------------DTTAAGVHKAAGLVQLGDAQKELGQDTHAQISYEQAAATDAGSSDAYFKLGTLLQ 1095
            G   P PI+R+L EE+ R+LAL RRDL  VAR SP+LL  AV ++ +M + AV  A+    AL NMGRLLE RGHPDEALLCFQEAS+                                  RDESHW AW GLGQ K AQ  + +AVEA S+WL+G                     +  A     A GLVQLG+A  +LGQD  A+ +YE+A + D   S+A+F+LGTLLQ
Sbjct:   49 GMLLPAPIARVLHEEVFRVLALNRRDLDIVARVSPELLQSAVVKSFWMFEEAVFTAAARSHALSNMGRLLEDRGHPDEALLCFQEASTADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDESHWSAWCGLGQVKGAQAKYAEAVEAFSKWLQGGGGGEGGAAENGNTGSGAPQAEKVAGARFMAKGLVQLGEAHVKLGQDKQARSAYERAVSADENCSEAHFQLGTLLQ 281          
BLAST of mRNA_H-paniculata_contig2404.6508.1 vs. uniprot
Match: A0A7S3HLQ1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLQ1_9STRA)

HSP 1 Score: 100 bits (250), Expect = 5.330e-18
Identity = 67/235 (28.51%), Postives = 119/235 (50.64%), Query Frame = 0
Query:    6 EVVRVAGETIGISLYPRLMTILTVTED-LDPQRRSIGWVIRLMDEIYDSRQGVETGDTILKYFIASFAAEEDHFNLDGRMRRHTSFPTFAYNHLKNKHGVKHVVRSVCLDLVCNAHIHRRRHPEVEVFARFLEEFYGEKELYFFLDVRAQVQRMTRVC--CRRQKT------NTQTVWMSHADCVRVARGVFVDTTTLYFRDLIDTIESQASCDHEG-GHSKRISVSDFFYLAMV 230
            +V  VA E +  + YPR   ++    D + P++R   WV++++++I+D R  +E  D            E++  + D  +     FP F    +    G+K +V   C DL+ N +++R+ + E+EVF RFL+EFY   +L FFL VR+ + ++  +    R QK         + +W+S+ +   VAR VF       FRD +  I  Q   +    G S+RI ++++ +L++V
Sbjct:   94 DVTVVAPEHLEYNAYPRFTALIANNGDTVRPRQRPFTWVMKIVEDIFDHRFSLEKND---------IEREDESPSFDLML---LIFPVFVVRKIGTNVGLKTIVDQTCWDLLYNVNLYRKDYLELEVFGRFLQEFYDHDDLLFFLYVRSVLAKVLHISFKARWQKKFDGVSGQPKALWISYKEAAHVARIVFGSDNEGLFRDFMRLITPQMVGEKTASGDSRRIDITEYLHLSVV 316          
BLAST of mRNA_H-paniculata_contig2404.6508.1 vs. uniprot
Match: A0A812U9B1_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812U9B1_9DINO)

HSP 1 Score: 101 bits (251), Expect = 6.240e-18
Identity = 60/200 (30.00%), Postives = 106/200 (53.00%), Query Frame = 0
Query:   18 SLYPRLMTILTVTEDLDPQRRSIGWVIRLMDEIYDSRQGVETGDTILKYFIASFAAEEDHFNLDGRMRRHTSFPTFAYNHLKNKHGVKHVVRSVCLDLVCNAHIHRRRHPEVEVFARFLEEFYGEKELYFFLDVRAQVQRMTRVCCRRQKTNT-----------QTVWMSHADCVRVARGVFVDTTTLYFRDLIDTIESQ 206
            S+YP+  +++++ +++ P+ R + W++RL++EIYD+R   +T +   +   A+ A          + R  + FP+F       ++G+  ++   C DL+ N H  R+ + EVEVFARFLEE+Y   +L FFL VR+ VQ+  R   R + T             + ++MS  +C  VAR VF       +R  +  ++S+
Sbjct:   96 SVYPKFYSLISLRDNIAPKLRPLSWLMRLIEEIYDNRYARDTAELREEAEGAAGATAAP-----PKSRGPSDFPSFVVEFFSKRYGLPQLIDQTCWDLLYNVHAARKEYLEVEVFARFLEEYYDPDDLLFFLYVRSVVQKELRFTFRSRWTELGKSVLGADKTPKAIFMSQRECQLVARVVFGAEGDPLYRTFMALVDSR 290          
BLAST of mRNA_H-paniculata_contig2404.6508.1 vs. uniprot
Match: A0A482S8G9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S8G9_9ARCH)

HSP 1 Score: 88.2 bits (217), Expect = 6.730e-15
Identity = 60/233 (25.75%), Postives = 118/233 (50.64%), Query Frame = 0
Query:    8 VRVAG-ETIGISLYPRLMTILTVTED-LDPQRRSIGWVIRLMDEIYDSRQGVETGDTILKYFIASFAAEEDHFNLDGRMRRHTSFPTFAYNHLKNKHGVKHVVRSVCLDLVCNAHIHRRRHPEVEVFARFLEEFYGEKELYFFLDVRAQVQRMTRVCCRRQKTN-------TQTVWMSHADCVRVARGVFVDTTTLYFRDLIDTIESQA-SCDHEGGHSKRISVSDFFYLAMV 230
            VR+ G E    + YPR  +++    D + P+ R + W+++ ++++YD+R   E  +            E+D    D  +     FP F    +    G+K ++  +C D++ + + +RR + E+E+FARFL+EFY   +L F+L VR+ + ++  V  + +           ++ WMS+ + V +AR VF   +   +RD I  I  Q      +   ++RI ++++ +L++V
Sbjct:   99 VRIVGVEPFDYTAYPRFSSLIANRGDTVKPKLRPLSWLMKHVEDVYDARFEHEKNEV---------EREDDSPAFDLIL---LIFPIFVVRKVGTNVGLKSLLDQMCWDILHSVNTYRRDYLELEIFARFLQEFYDHDDLLFYLYVRSVISKVLHVNFKNRWVKFDGPGRQPRSQWMSYREAVHIARIVFGSDSEDMYRDFILLITPQMIGSKTDTTDTRRIDITEYLHLSVV 319          
BLAST of mRNA_H-paniculata_contig2404.6508.1 vs. uniprot
Match: A0A2R5G9E0_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G9E0_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 2.540e-14
Identity = 65/246 (26.42%), Postives = 117/246 (47.56%), Query Frame = 0
Query:    9 RVAGETIGISLYPRLMTILTVTEDLDPQRRSIGWVIRLMDEIYDSRQGVETGDTILKYFIASFAAEEDHFNLDGRMRRHTSFPTFAYNHLKNKHGVKHVVRSVCLDLVCNAHIHRRRHPEVEVFARFLEEFYGEKELYFFLDVRAQ----VQRMTRV------CCRRQKTNTQT---VWMSHADCVRVARGVFVDTTTLY----FRDLIDTIESQASCDHEGGHS-------KRISVSDFFYLAMV 230
            R + +    + Y +  +++ + + L+P+ RS+ W+  L++++YD R  V++     KY +                     FP F  +HL  ++G++ ++  V  D+V + H HRR   EVEVFARFLEE+Y  ++L F+L VR+     VQR  R         +R  T+T++   V++   +   VA+ +F  + +      F  L+D      S D E G++         + V+   +LA+ 
Sbjct:  151 RKSADEEDFATYSKFCSLIEMRDKLEPRPRSLKWLNGLINDVYDDRAAVKS-----KYDLEELRI----------------FPVFVMDHLGKRYGLRQIIDQVAWDMVLSVHTHRRHRIEVEVFARFLEEYYDREDLRFYLRVRSITDNIVQRSVRAGWSKESVSQRSTTSTRSDIHVYLKWNEVEAVAKHLFGSSDSAERQETFLALVDENAMPLSSDAESGYAGDSETNAPLVEVAQLLHLAVA 375          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2404.6508.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FPZ9_ECTSI3.890e-4544.21TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S3HLQ1_9STRA5.330e-1828.51Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A812U9B1_9DINO6.240e-1830.00Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A482S8G9_9ARCH6.730e-1525.75Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A2R5G9E0_9STRA2.540e-1426.42Uncharacterized protein n=1 Tax=Hondaea fermentalg... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 977..1010
e-value: 0.032
score: 23.4
coord: 1011..1044
e-value: 200.0
score: 3.5
coord: 943..976
e-value: 0.13
score: 21.4
coord: 1050..1083
e-value: 180.0
score: 3.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 908..1098
e-value: 1.1E-24
score: 89.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 943..1091
NoneNo IPR availablePANTHERPTHR12558:SF13CELL DIVISION CYCLE PROTEIN 27 HOMOLOGcoord: 942..1078
NoneNo IPR availablePANTHERPTHR12558CELL DIVISION CYCLE 16,23,27coord: 942..1078
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 943..1103
score: 16.436

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2404contigH-paniculata_contig2404:5574..14258 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2404.6508.1mRNA_H-paniculata_contig2404.6508.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2404 5574..14258 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2404.6508.1 ID=prot_H-paniculata_contig2404.6508.1|Name=mRNA_H-paniculata_contig2404.6508.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1104bp
RHEDDEVVRVAGETIGISLYPRLMTILTVTEDLDPQRRSIGWVIRLMDEI
YDSRQGVETGDTILKYFIASFAAEEDHFNLDGRMRRHTSFPTFAYNHLKN
KHGVKHVVRSVCLDLVCNAHIHRRRHPEVEVFARFLEEFYGEKELYFFLD
VRAQVQRMTRVCCRRQKTNTQTVWMSHADCVRVARGVFVDTTTLYFRDLI
DTIESQASCDHEGGHSKRISVSDFFYLAMVCFTSPEEPYDRHCADVGSRS
GRPRSLEMTSRSHGGAGNRCGHGRNRSRGRVARPDIVAPKIDILSSEPIP
GHGVYQQSYPRRKAGRNSGERRDANSPSAERGIAKCTEEVEDGVHQPRSH
SLEREGSGRREPGVGYVGRNSNDCRGASDSNALHVDAIETGGTGGLRKAK
IITSVSSDPKSSGVRLDAACEKELRSPTVTCAMSRSPTAVLHVETGFLGM
EYPQAKISPGSRTGDGHSGTPVNQTAQSTRSPRDGISALDRDRTNGCKIG
LEEKKYGTGHDESLIASRGINTLKRRDRDGEMTTRDAWFKSDANPGGKQT
CEGEEKAKARTTAQGSRGEGMSGKPRESKVMGGDRTSSNDADLTSLGSKS
NSTYMSAEDSEEYPRPKGGDGFSVGENVTGPTTGESVLSVVRSRSQYSAF
SEKHARQASTSGNPPTQRVHEIPSFNPDSNPRLDLRLNMLLSAGPPLPRP
TRPLRPQQRSPRSTILADTTTHQMAAATFNDRRGVVSPTASRGRSSEDKC
RGNGPLDCSSRHTRAPNRVSRCPPSGCHSIPAAVGDSYGRVGNGFERRGK
QYMTARKLGSSSGDKSGMAIHDDVSQSASSEDSQAVEIREDVLSLTTDWF
SAFELRFFPGLAAKLGVAAVVGGDGGEGHTPMAGGFAPLPISRILSEEMV
RILALRRRDLHAVARDSPDLLHKAVAEACYMVDSAVSNASTHCLALCNMG
RLLEGRGHPDEALLCFQEASSVHSSSAEAMCLRAANLRMKGNLEDAVFYF
ESALARDESHWPAWHGLGQTKAAQGMFTDAVEALSRWLEGDTTAAGVHKA
AGLVQLGDAQKELGQDTHAQISYEQAAATDAGSSDAYFKLGTLLQVKACL
PPF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom