prot_H-paniculata_contig23931.6474.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23931.6474.1
Unique Nameprot_H-paniculata_contig23931.6474.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length198
Homology
BLAST of mRNA_H-paniculata_contig23931.6474.1 vs. uniprot
Match: A0A6H5KC04_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC04_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 9.220e-31
Identity = 74/228 (32.46%), Postives = 120/228 (52.63%), Query Frame = 0
Query:    1 ICISQHHYVVSLLKKFGMDNCNPVHTPGTGKELTAN--------PDGTARFMT----------------------------NPTSLHMGIVKRTLRYLKDAPNLNLTDSRDSNFELTGFCDASYGTGDSERARSTSGSMYFLSSGVVHFSSSLLIITAQSTTDAELIAMSTCAKQGIYLSSILGELGWKKFRSVCVFCDNKRALLLAGQGNYGSKSKHLAIRFAGLRD 192
            + ISQ  Y   +L+++GM+  NPV TPG G EL+          P+   RF T                            NP  +HM   K  LRYL+  P+L +   +   F L+ F D+S+G  + +  RST+G ++FL  G++ + +    + AQ+T +AEL A+S  A++ +Y+S+ + E+G+K FRSV +  D+  AL +A    + S++KH+A+RF  LR+
Sbjct:   29 LAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEEKQRFQTITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKK-GQFRLSCFTDSSFGA-NPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRE 254          
BLAST of mRNA_H-paniculata_contig23931.6474.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 2.360e-28
Identity = 73/230 (31.74%), Postives = 122/230 (53.04%), Query Frame = 0
Query:    1 ICISQHHYVVSLLKKFGMDNCNPVHTPGTGKELTANPD-----------------GTARFM-------------------TNPTSLHMGIVKRTLRYLKDAPNLNLTDSRDSNFELTGFCDASYGTGDSERARSTSGSMYFLSSGVVHFSSSLLIITAQSTTDAELIAMSTCAKQGIYLSSILGELGWKKFRSVCVFCDNKRALLLAGQGNYGSKSKHLAIRFAGLRDWI 194
            + ISQ HYV +LL++FGM   NPV TPG G E++ N                   G+  ++                   +NP  ++M   K  LRYL+  P L +   R   F L  F D+S+G  + +  RST+G ++FL+ G++ + +    +TAQST +AE+ A+S  A++ +Y+S+ + EL +K F SV +  D+  AL +AG   +  ++KH+A+R+  +R+ +
Sbjct:  433 LAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMAGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKR-GQFRLAAFTDSSFGA-NPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELV 660          
BLAST of mRNA_H-paniculata_contig23931.6474.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 2.450e-28
Identity = 73/228 (32.02%), Postives = 119/228 (52.19%), Query Frame = 0
Query:    1 ICISQHHYVVSLLKKFGMDNCNPVHTPGTGKELTAN--------PDGTARFMT----------------------------NPTSLHMGIVKRTLRYLKDAPNLNLTDSRDSNFELTGFCDASYGTGDSERARSTSGSMYFLSSGVVHFSSSLLIITAQSTTDAELIAMSTCAKQGIYLSSILGELGWKKFRSVCVFCDNKRALLLAGQGNYGSKSKHLAIRFAGLRD 192
            + ISQ  Y   +L+++GM+  NPV TPG G EL+          P+   RF                              NP  +HM   K  LRYL+  P+L +   +   F L+ F D+S+G  + +  RST+G ++FL  G++ + +    + AQ+T +AEL A+S  A++ +Y+S+ + E+G+K FRSV +  D+  AL +A    + S++KH+A+RF  LR+
Sbjct:  466 LAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKK-GKFRLSCFTDSSFGA-NPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRE 691          
BLAST of mRNA_H-paniculata_contig23931.6474.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 2.810e-28
Identity = 73/228 (32.02%), Postives = 119/228 (52.19%), Query Frame = 0
Query:    1 ICISQHHYVVSLLKKFGMDNCNPVHTPGTGKELTAN--------PDGTARFMT----------------------------NPTSLHMGIVKRTLRYLKDAPNLNLTDSRDSNFELTGFCDASYGTGDSERARSTSGSMYFLSSGVVHFSSSLLIITAQSTTDAELIAMSTCAKQGIYLSSILGELGWKKFRSVCVFCDNKRALLLAGQGNYGSKSKHLAIRFAGLRD 192
            + ISQ  Y   +L+++GM+  NPV TPG G EL+          P+   RF                              NP  +HM   K  LRYL+  P+L +   +   F L+ F D+S+G  + +  RST+G ++FL  G++ + +    + AQ+T +AEL A+S  A++ +Y+S+ + E+G+K FRSV +  D+  AL +A    + S++KH+A+RF  LR+
Sbjct: 1245 LAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKK-GQFRLSCFTDSSFGA-NPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRN 1470          
BLAST of mRNA_H-paniculata_contig23931.6474.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 8.940e-28
Identity = 72/230 (31.30%), Postives = 121/230 (52.61%), Query Frame = 0
Query:    1 ICISQHHYVVSLLKKFGMDNCNPVHTPGTGKELTANPD-----------------GTARFM-------------------TNPTSLHMGIVKRTLRYLKDAPNLNLTDSRDSNFELTGFCDASYGTGDSERARSTSGSMYFLSSGVVHFSSSLLIITAQSTTDAELIAMSTCAKQGIYLSSILGELGWKKFRSVCVFCDNKRALLLAGQGNYGSKSKHLAIRFAGLRDWI 194
            + ISQ HYV +LL++FGM   NPV TPG G E++ N                   G+  ++                   +NP  ++M   K  LRYL+  P L +   R   F L  F D+S+G  + +  RST+G ++FL+ G++ + +    +TAQST +AE+ A+S  A++ +Y+S+ + EL +K F SV +  D+  AL +AG   +  ++KH+ +R+  +R+ +
Sbjct:  589 LAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKR-GQFRLAAFTDSSFGA-NPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVTLRYFFIRELV 816          
BLAST of mRNA_H-paniculata_contig23931.6474.1 vs. uniprot
Match: A0A6H5K4S9_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S9_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 2.680e-26
Identity = 70/228 (30.70%), Postives = 116/228 (50.88%), Query Frame = 0
Query:    1 ICISQHHYVVSLLKKFGMDNCNPVHTPGTGKELTAN--------PDGTARFMT----------------------------NPTSLHMGIVKRTLRYLKDAPNLNLTDSRDSNFELTGFCDASYGTGDSERARSTSGSMYFLSSGVVHFSSSLLIITAQSTTDAELIAMSTCAKQGIYLSSILGELGWKKFRSVCVFCDNKRALLLAGQGNYGSKSKHLAIRFAGLRD 192
            I    H  +  + +++GM+  NPV TPG G EL+          P+   RF                              NP  +HM   K  LRYL+  P+L +   +   F L+ F D+S+G  + +  RST+G ++FL  G++ + +    + AQ+T +AEL A+S  A++ +Y+S+ + E+G+K FRSV +  D+  AL +A    + S++KH+A+RF  LR+
Sbjct:  625 IIFGWHFEMTDMGERYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDMSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKK-GQFRLSCFTDSSFGA-NPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRE 850          
BLAST of mRNA_H-paniculata_contig23931.6474.1 vs. uniprot
Match: A0A6H5KUJ3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUJ3_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 1.180e-25
Identity = 71/230 (30.87%), Postives = 120/230 (52.17%), Query Frame = 0
Query:    1 ICISQHHYVVSLLKKFGMDNCNPVHTPGTGKELTANPD-----------------GTARFM-------------------TNPTSLHMGIVKRTLRYLKDAPNLNLTDSRDSNFELTGFCDASYGTGDSERARSTSGSMYFLSSGVVHFSSSLLIITAQSTTDAELIAMSTCAKQGIYLSSILGELGWKKFRSVCVFCDNKRALLLAGQGNYGSKSKHLAIRFAGLRDWI 194
            + ISQ HYV +LL++FGM   NPV TPG G E++ N                   G+  ++                   +NP  ++M   K  LRYL+  P L +   R   F L  F D+S+G  + +  RST+G ++FL+ G++ + +    +TAQST +AE+ A+S  A++ +Y+S+ + EL +K F SV +  D+  AL +AG   +  ++ ++A+R   +R+ +
Sbjct:  106 LAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTEKKNYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPGLPIVYKR-GQFRLAAFTDSSFGA-NPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRT-NVALRCFFIRELV 332          
BLAST of mRNA_H-paniculata_contig23931.6474.1 vs. uniprot
Match: A0A6H5K4S5_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S5_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.240e-25
Identity = 73/247 (29.55%), Postives = 122/247 (49.39%), Query Frame = 0
Query:    1 ICISQHHYVVSLLKKFGMDNCNPVHTPGTGKELTANPD-----------------GTARFM-------------------TNPTSLHMGIVKRTLRYLKDAPN-----------------LNLTDSRDSNFELTGFCDASYGTGDSERARSTSGSMYFLSSGVVHFSSSLLIITAQSTTDAELIAMSTCAKQGIYLSSILGELGWKKFRSVCVFCDNKRALLLAGQGNYGSKSKHLAIRFAGLRDWI 194
            + ISQ HYV +LL++FGM   NPV TPG G E++ N                   G+  ++                   +NP  ++M   K  LRYL+  P                  L +   R   F L  F D+S+G  + +  RST+G ++FL+ G++ + +    +TAQST +AE+ A+S  A++ +Y+S+ + EL +K F SV +  D+  AL +AG   +  ++KH+A+R+  +R+ +
Sbjct:   48 LAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVXXXXXXXXXXXXXXXSVLPIVYKR-GQFRLAAFTDSSFGA-NPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELV 292          
BLAST of mRNA_H-paniculata_contig23931.6474.1 vs. uniprot
Match: A0A1J6HVV2_NICAT (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=2 Tax=Nicotiana attenuata TaxID=49451 RepID=A0A1J6HVV2_NICAT)

HSP 1 Score: 111 bits (277), Expect = 1.720e-25
Identity = 73/229 (31.88%), Postives = 114/229 (49.78%), Query Frame = 0
Query:    1 ICISQHHYVVSLLKKFGMDNCNPVHTP-GTGKELTANPDG-------------------------------TARFMTNPTSLHMGIVKRTLRYLKDAPNLNLTDSRDSNFELTGFCDASYGTGDSERARSTSGSMYFLSSGVVHFSSSLLIITAQSTTDAELIAMSTCAKQGIYLSSILGELGWKKFRSVCVFCDNKRALLLAGQGNYGSKSKHLAIRFAGLRDWINQR 197
            I ISQ  Y   +LKKF MDNCNPV TP   G +++ + DG                                +RFM  PT+ H+ + KR LRY+KD  +  +  S   + +  G+CD+ +  GD +  +ST+G ++FL +    ++S    I   ST +AE +A  +C    I+L S+L EL   +  +  +F DNK A+ LA    +  +SKH+  R+  +RD I+ +
Sbjct:  136 IFISQGEYAKEILKKFEMDNCNPVSTPVECGVKISKHGDGENVNPTFFKSLVGSLRYLTCTRPDILYGVGLVSRFMEAPTTSHLKVAKRILRYIKDTLDYGILYSSSKDSKFVGYCDSDW-AGDIDDRKSTTGFVFFLGNSAFTWNSKKQPIVTLSTCEAEYVAACSCVCHAIWLRSLLEELHQPQKDATKIFVDNKSAIELAKNPVFHERSKHIDTRYHFIRDCISNK 363          
BLAST of mRNA_H-paniculata_contig23931.6474.1 vs. uniprot
Match: A0A6H5KY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY35_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 1.810e-25
Identity = 69/220 (31.36%), Postives = 111/220 (50.45%), Query Frame = 0
Query:    4 SQHHYVVSLLKKFGMDNCNPVHTPGTGKELTAN--------PDGTARFMT----------------------------NPTSLHMGIVKRTLRYLKDAPNLNLTDSRDSNFELTGFCDASYGTGDSERARSTSGSMYFLSSGVVHFSSSLLIITAQSTTDAELIAMSTCAKQGIYLSSILGELGWKKFRSVCVFCDNKRALLLAGQGNYGSKSKHLAIRF 187
            SQ  Y    L+++GM+  NPV TPG G EL+          P+   RF                              NP  +HM   K  LRYL+  P L +   +   F L+ F ++S+G  + +  RST+G M+FL  G++ + +    + AQ+T +AEL A+   A++ +Y+S+ + E+G+K FRSV +  D+  AL +A    + S++KH+A+RF
Sbjct:  329 SQGPYARDTLQRYGMEQANPVSTPGYGAELSTEQPQDQQLEPEDKHRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPGLPIVYKK-GQFRLSCFTESSFGA-NPDNGRSTTGYMFFLGGGLISYGAKAQTLAAQNTVEAELQALGFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRF 546          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23931.6474.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KC04_9PHAE9.220e-3132.46Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF89_9PHAE2.360e-2831.74Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF46_9PHAE2.450e-2832.02Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KHG5_9PHAE2.810e-2832.02Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]
A0A6H5KE92_9PHAE8.940e-2831.30Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K4S9_9PHAE2.680e-2630.70CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KUJ3_9PHAE1.180e-2530.87Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K4S5_9PHAE1.240e-2529.55Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1J6HVV2_NICAT1.720e-2531.88Retrovirus-related pol polyprotein from transposon... [more]
A0A6H5KY35_9PHAE1.810e-2531.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 41..192
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 41..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23931contigH-paniculata_contig23931:3162..3863 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23931.6474.1mRNA_H-paniculata_contig23931.6474.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23931 3162..3863 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23931.6474.1 ID=prot_H-paniculata_contig23931.6474.1|Name=mRNA_H-paniculata_contig23931.6474.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=198bp
ICISQHHYVVSLLKKFGMDNCNPVHTPGTGKELTANPDGTARFMTNPTSL
HMGIVKRTLRYLKDAPNLNLTDSRDSNFELTGFCDASYGTGDSERARSTS
GSMYFLSSGVVHFSSSLLIITAQSTTDAELIAMSTCAKQGIYLSSILGEL
GWKKFRSVCVFCDNKRALLLAGQGNYGSKSKHLAIRFAGLRDWINQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like