prot_H-paniculata_contig239.6459.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig239.6459.1
Unique Nameprot_H-paniculata_contig239.6459.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length66
Homology
BLAST of mRNA_H-paniculata_contig239.6459.1 vs. uniprot
Match: D7FT03_ECTSI (Mitochondrial import inner membrane translocase subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT03_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 2.760e-29
Identity = 52/66 (78.79%), Postives = 61/66 (92.42%), Query Frame = 0
Query:    1 MQQEVQAKAMQELMTQMTDQCFNRCAKTR-GDRLDSSEQGCLAMCMDRYMDTLGAVNKAMVTRTDR 65
            +Q++VQAKA+QELMTQMTDQCFNRCAKT  GDR++SSEQGCLAMCMDRYMDT+G VNKAMV + +R
Sbjct:   17 LQEQVQAKALQELMTQMTDQCFNRCAKTSSGDRINSSEQGCLAMCMDRYMDTMGLVNKAMVAKANR 82          
BLAST of mRNA_H-paniculata_contig239.6459.1 vs. uniprot
Match: A0A835YPH8_9STRA (Mitochondrial import inner membrane translocase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPH8_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 7.870e-18
Identity = 36/58 (62.07%), Postives = 48/58 (82.76%), Query Frame = 0
Query:    9 AMQELMTQMTDQCFNRCAK-TRGDRLDSSEQGCLAMCMDRYMDTLGAVNKAMVTRTDR 65
            +MQEL++++T  CF +CAK ++GDRLDS EQ CLA+CMDRY+DT+  VNKA+V R DR
Sbjct:   25 SMQELLSKLTSTCFTKCAKPSKGDRLDSGEQSCLALCMDRYVDTMQLVNKAVVDRQDR 82          
BLAST of mRNA_H-paniculata_contig239.6459.1 vs. uniprot
Match: A0A154PK30_DUFNO (Mitochondrial import inner membrane translocase subunit n=3 Tax=Halictidae TaxID=77572 RepID=A0A154PK30_DUFNO)

HSP 1 Score: 70.1 bits (170), Expect = 2.910e-14
Identity = 33/63 (52.38%), Postives = 42/63 (66.67%), Query Frame = 0
Query:    3 QEVQAKAMQELMTQMTDQCFNRCAKTRGDRLDSSEQGCLAMCMDRYMDTLGAVNKAMVTRTDR 65
            Q++     QEL+T+MT++CF +C    G  LDSSEQ C+AMCMDRYMDT   V+KA   R  R
Sbjct:   23 QQIAVANAQELLTKMTEKCFKKCINKPGTTLDSSEQKCVAMCMDRYMDTFNLVSKAYSDRLQR 85          
BLAST of mRNA_H-paniculata_contig239.6459.1 vs. uniprot
Match: A0A6J0CEK4_NEOLC (Mitochondrial import inner membrane translocase subunit n=3 Tax=Hymenoptera TaxID=7399 RepID=A0A6J0CEK4_NEOLC)

HSP 1 Score: 69.3 bits (168), Expect = 6.160e-14
Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 0
Query:    2 QQEVQAKAMQELMTQMTDQCFNRCAKTRGDRLDSSEQGCLAMCMDRYMDTLGAVNKAMVTRTDR 65
            QQ++     QEL+T+MT++CF +C +  G  LDSSEQ C+AMCMDRYMD    V+KA   R  R
Sbjct:   24 QQQIAVANAQELLTKMTEKCFKKCIQKPGTSLDSSEQKCVAMCMDRYMDAWNLVSKAYSNRLQR 87          
BLAST of mRNA_H-paniculata_contig239.6459.1 vs. uniprot
Match: UPI00158AAD58 (mitochondrial import inner membrane translocase subunit Tim13 n=1 Tax=Chelonus insularis TaxID=460826 RepID=UPI00158AAD58)

HSP 1 Score: 68.9 bits (167), Expect = 9.670e-14
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 0
Query:    3 QEVQAKAMQELMTQMTDQCFNRCAKTRGDRLDSSEQGCLAMCMDRYMDTLGAVNKAMVTRTDR 65
            QE+   + QEL+T++T++CF +C    G  LDSSEQ C+AMCMDRYMD    V+KA   R  R
Sbjct:   24 QEIAVASAQELLTKITEKCFKKCVNKPGTSLDSSEQKCVAMCMDRYMDAFTVVSKAYGNRLQR 86          
BLAST of mRNA_H-paniculata_contig239.6459.1 vs. uniprot
Match: A0A2P8XKK0_BLAGE (Mitochondrial import inner membrane translocase subunit n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8XKK0_BLAGE)

HSP 1 Score: 68.2 bits (165), Expect = 1.400e-13
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 0
Query:    3 QEVQAKAMQELMTQMTDQCFNRCAKTRGDRLDSSEQGCLAMCMDRYMDTLGAVNKAMVTRTDR 65
            Q++     QEL+T+MT++CF +C    G  LDSSEQ C+AMCMDRYMD    V+KA  +R  R
Sbjct:   15 QQIAVANAQELLTKMTEKCFKKCINKPGTSLDSSEQKCIAMCMDRYMDAWNLVSKAYGSRIQR 77          
BLAST of mRNA_H-paniculata_contig239.6459.1 vs. uniprot
Match: A0A6J2YE62_SITOR (Mitochondrial import inner membrane translocase subunit n=3 Tax=Cucujiformia TaxID=41088 RepID=A0A6J2YE62_SITOR)

HSP 1 Score: 67.8 bits (164), Expect = 2.250e-13
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 0
Query:    3 QEVQAKAMQELMTQMTDQCFNRCAKTRGDRLDSSEQGCLAMCMDRYMDTLGAVNKAMVTRTDR 65
            Q++     QEL+T+MT++CF +C    G  LDSSEQ C+AMCMDRYMD+   V+KA   R  R
Sbjct:   21 QQIAVANAQELLTKMTEKCFKKCISKPGTSLDSSEQKCVAMCMDRYMDSWNLVSKAYSMRIQR 83          
BLAST of mRNA_H-paniculata_contig239.6459.1 vs. uniprot
Match: D6WDD5_TRICA (Mitochondrial import inner membrane translocase subunit n=4 Tax=Cucujiformia TaxID=41088 RepID=D6WDD5_TRICA)

HSP 1 Score: 67.8 bits (164), Expect = 2.310e-13
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 0
Query:    3 QEVQAKAMQELMTQMTDQCFNRCAKTRGDRLDSSEQGCLAMCMDRYMDTLGAVNKAMVTRTDR 65
            Q++     QEL+T+MT++CF +C    G  LDSSEQ C+AMCMDRYMD+   V+KA   R  R
Sbjct:   22 QQIAVANAQELLTKMTEKCFKKCINKPGTSLDSSEQKCVAMCMDRYMDSWNLVSKAYSLRIQR 84          
BLAST of mRNA_H-paniculata_contig239.6459.1 vs. uniprot
Match: UPI001D01DADD (mitochondrial import inner membrane translocase subunit Tim13 n=2 Tax=Microgastrinae TaxID=65207 RepID=UPI001D01DADD)

HSP 1 Score: 67.8 bits (164), Expect = 2.370e-13
Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 0
Query:    3 QEVQAKAMQELMTQMTDQCFNRCAKTRGDRLDSSEQGCLAMCMDRYMDTLGAVNKAMVTRTDR 65
            QE+     QEL+T++T++CF +C    G  LDSSEQ C+AMCMDRYMD    V+KA   R  R
Sbjct:   23 QEIAVANAQELLTKITEKCFKKCIIKPGSSLDSSEQKCVAMCMDRYMDAFNVVSKAYSNRLQR 85          
BLAST of mRNA_H-paniculata_contig239.6459.1 vs. uniprot
Match: A0A2J7QW13_9NEOP (Mitochondrial import inner membrane translocase subunit n=4 Tax=Termitoidae TaxID=1912919 RepID=A0A2J7QW13_9NEOP)

HSP 1 Score: 67.8 bits (164), Expect = 2.430e-13
Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 0
Query:    3 QEVQAKAMQELMTQMTDQCFNRCAKTRGDRLDSSEQGCLAMCMDRYMDTLGAVNKAMVTRTDR 65
            Q++     QEL+T+MT++CF +C    G  LDSSEQ C+AMCMDRYMD    V+KA   R  R
Sbjct:   24 QQIAVANAQELLTKMTEKCFKKCINKPGTSLDSSEQKCVAMCMDRYMDAWNLVSKAYSNRLQR 86          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig239.6459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT03_ECTSI2.760e-2978.79Mitochondrial import inner membrane translocase su... [more]
A0A835YPH8_9STRA7.870e-1862.07Mitochondrial import inner membrane translocase su... [more]
A0A154PK30_DUFNO2.910e-1452.38Mitochondrial import inner membrane translocase su... [more]
A0A6J0CEK4_NEOLC6.160e-1451.56Mitochondrial import inner membrane translocase su... [more]
UPI00158AAD589.670e-1450.79mitochondrial import inner membrane translocase su... [more]
A0A2P8XKK0_BLAGE1.400e-1350.79Mitochondrial import inner membrane translocase su... [more]
A0A6J2YE62_SITOR2.250e-1350.79Mitochondrial import inner membrane translocase su... [more]
D6WDD5_TRICA2.310e-1350.79Mitochondrial import inner membrane translocase su... [more]
UPI001D01DADD2.370e-1350.79mitochondrial import inner membrane translocase su... [more]
A0A2J7QW13_9NEOP2.430e-1350.79Mitochondrial import inner membrane translocase su... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035427Tim10-like domain superfamilyGENE3D1.10.287.810coord: 7..65
e-value: 2.5E-17
score: 64.1
IPR035427Tim10-like domain superfamilySUPERFAMILY144122Tim10-likecoord: 5..62
IPR004217Tim10-likePFAMPF02953zf-Tim10_DDPcoord: 1..59
e-value: 8.0E-21
score: 73.5
NoneNo IPR availablePANTHERPTHR19338:SF0MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM13coord: 2..65
IPR039238Mitochondrial import inner membrane translocase subunit Tim8/13PANTHERPTHR19338TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 13 HOMOLOGcoord: 2..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig239contigH-paniculata_contig239:8215..12256 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig239.6459.1mRNA_H-paniculata_contig239.6459.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig239 8206..13602 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig239.6459.1 ID=prot_H-paniculata_contig239.6459.1|Name=mRNA_H-paniculata_contig239.6459.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=66bp
MQQEVQAKAMQELMTQMTDQCFNRCAKTRGDRLDSSEQGCLAMCMDRYMD
TLGAVNKAMVTRTDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035427Tim10-like_dom_sf
IPR004217Tim10-like
IPR039238Tim8/13