prot_H-paniculata_contig2376.6424.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2376.6424.1
Unique Nameprot_H-paniculata_contig2376.6424.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length182
Homology
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BLAST of mRNA_H-paniculata_contig2376.6424.1 vs. uniprot
Match: A0A6H5JD62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD62_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 8.990e-13
Identity = 35/54 (64.81%), Postives = 42/54 (77.78%), Query Frame = 0 
Query:  127 LDLNFYDGSIHNFAQAGDVESVRRCLVAGY-KVDEQDELGCTPVHFAGAMVRKN 179
            L++   +  IH++AQAGDVE VRRCL+AG+ KVDE DELGCTPVH AGAM   N
Sbjct:   74 LEVKVEESEIHHYAQAGDVEEVRRCLLAGFNKVDEVDELGCTPVHLAGAMGHTN 127
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2376.6424.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JD62_9PHAE8.990e-1364.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 135..179
e-value: 4.6E-5
score: 25.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 136..172
score: 8.534

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2376contigH-paniculata_contig2376:6105..20341 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2376.6424.1mRNA_H-paniculata_contig2376.6424.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2376 5805..20472 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2376.6424.1 ID=prot_H-paniculata_contig2376.6424.1|Name=mRNA_H-paniculata_contig2376.6424.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=182bp
MGGIDVLIPRSLVQAKAGHPYNIRRYTVTDTTRNERLNNSGSMLHLQSAS
MRNLLKKGCYEGSTGAGGACQTEGVVEWKWDQDRREQRIGTRALPETVLA
AKGKAEEKKEGRTRQGVDAHEEGWPKLDLNFYDGSIHNFAQAGDVESVRR
CLVAGYKVDEQDELGCTPVHFAGAMVRKNFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom