prot_H-paniculata_contig2359.6370.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2359.6370.1
Unique Nameprot_H-paniculata_contig2359.6370.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length221
Homology
BLAST of mRNA_H-paniculata_contig2359.6370.1 vs. uniprot
Match: D7G4M2_ECTSI (Smc-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4M2_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 3.660e-73
Identity = 134/214 (62.62%), Postives = 164/214 (76.64%), Query Frame = 0
Query:    2 KRKAEEVNKQNLSAKSRDEVEEMLLNATRLFKEKALLAQTLKENIAILLEENRQRVSKWKGMKRYIERRTTMLFNQYLQKKGSAGEVRFNDEEKKLGLTYQKSNTDETSQCNDVKQLSGGERSFATLALLLALGSQHECPFRVMDEFDVFMDAMSRNIAIKSVIEFAAEFDKRQFIFITPQDLSSVQANTSIKIHKMLPPQKGDHNQSTLEEAF 215
            KR  +E  K+   +K+++EVE  LL A  LFKEK  LA TL+ N+ +L  E  QR  +W+ M+ ++ R+T+ LF+ YLQ+KG++GEVRF++E + LGLTYQK ++D  SQC+DVK LSGGERSFATLALLLALG  HECPFRVMDEFDVFMDAMSRNIAIK VIEFA     RQFI ITPQDLSSV A+ + KI KM PP+KGDHNQ+TLEE  
Sbjct: 1048 KRYEKEREKRCKRSKTKEEVESQLLQAYNLFKEKEKLADTLEGNMEMLSNERNQRTRRWRQMRDFVARQTSRLFDAYLQEKGASGEVRFDNECQTLGLTYQKDSSDNASQCSDVKLLSGGERSFATLALLLALGQSHECPFRVMDEFDVFMDAMSRNIAIKQVIEFAKRDSSRQFILITPQDLSSVTASDACKIIKMQPPRKGDHNQTTLEETL 1261          
BLAST of mRNA_H-paniculata_contig2359.6370.1 vs. uniprot
Match: D7G4M1_ECTSI (Smc-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M1_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 4.280e-52
Identity = 98/179 (54.75%), Postives = 133/179 (74.30%), Query Frame = 0
Query:   42 LKENIAILLEENRQRVSKWKGMKRYIERRTTMLFNQYLQKKGSAGEVRFNDEEKKLGLTYQKSNTDETSQCNDVKQLSGGERSFATLALLLALGSQHECPFRVMDEFDVFMDAMSRNIAIKSVIEFAAEFDKRQFIFITPQDLSSVQANTSIKIHKMLPPQKGDHNQSTLEEAFANNNS 220
            L  N+ +L +E  +R  KWK  +  I   T  +F   L +K + GEV+FN ++K LGL+YQ    ++TS+C DV+QLSGGE+S+ATLALLL+LG+ H+CPFRVMDEFDVFMDA+SR+ AI  V++FA     +QFIFITPQDLSSV ++ + KI KM PP+KGDHNQ+TL E+F +++S
Sbjct:  989 LDSNMKMLSDERLKRREKWKTFRDVIPTWTARMFGDILAEKEAHGEVKFNHKKKTLGLSYQSQAHNDTSKCRDVRQLSGGEKSYATLALLLSLGAHHDCPFRVMDEFDVFMDAVSRDHAILEVLKFAKRNKDKQFIFITPQDLSSVTSSDTCKIIKMQPPRKGDHNQTTLTESFGSSSS 1167          
BLAST of mRNA_H-paniculata_contig2359.6370.1 vs. uniprot
Match: F0YEV6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEV6_AURAN)

HSP 1 Score: 172 bits (435), Expect = 1.140e-50
Identity = 90/168 (53.57%), Postives = 124/168 (73.81%), Query Frame = 0
Query:   49 LLEENRQRVSKWKGMKRYIERRTTMLFNQYLQKKGSAGEVRFNDEEKKLGLTYQKSNTDETSQCNDVKQLSGGERSFATLALLLALGSQHECPFRVMDEFDVFMDAMSRNIAIKSVIEFAAEFDKRQFIFITPQDLSSVQANTSIKIHKMLPPQKGDHNQSTLEEAFA 216
            L ++  +R ++ K +++YI RR+   F+  LQ KGSAG++ F  +EK LGLTYQK N D+ +  N++  LSGGERSF+TLA+L++LG+  ECPFRVMDEFDVFMD +SR +A+K +++ A + + RQFIFITPQDLSS+  +  +KI KM PP +G   Q TLEEAFA
Sbjct:   25 LKQDAHERWNRLKRIRQYICRRSNREFDNILQAKGSAGKLDFEHKEKTLGLTYQKDNADDANIINNITSLSGGERSFSTLAMLISLGATIECPFRVMDEFDVFMDQVSRKVAMKELVDMAKKMENRQFIFITPQDLSSLPQSDILKIFKMNPPIRG---QRTLEEAFA 189          
BLAST of mRNA_H-paniculata_contig2359.6370.1 vs. uniprot
Match: A0A7R9VE37_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VE37_9STRA)

HSP 1 Score: 157 bits (397), Expect = 3.710e-45
Identity = 80/159 (50.31%), Postives = 111/159 (69.81%), Query Frame = 0
Query:   43 KENIAILLEENRQRVSKWKGMKRYIERRTTMLFNQYLQKKGSAGEVRFNDEEKKLGLTYQKSNTDETSQCNDVKQLSGGERSFATLALLLALGSQHECPFRVMDEFDVFMDAMSRNIAIKSVIEFAAEFDKRQFIFITPQDLSSVQANTSIKIHKMLPP 201
            K+N+  ++ ++R R  +W+  + Y+   T + F+Q L KKGSAG++ F+ E + L L  QK N++E SQ  DVK LSGGERSF TLALLLALG   E PFRVMDEFDVF+D ++R IA+ +++  A   + RQFIFITPQDLS++  +  +KI +M PP
Sbjct:    1 KQNVDAMIADSRSRRKRWREFRGYLVETTNISFDQMLNKKGSAGQLDFDHENQTLNLIVQKDNSNEMSQTKDVKALSGGERSFTTLALLLALGESLETPFRVMDEFDVFLDPVARKIALDNMVSAAKSLEHRQFIFITPQDLSNLTTDPMLKIIRMKPP 159          
BLAST of mRNA_H-paniculata_contig2359.6370.1 vs. uniprot
Match: A0A7S2W981_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W981_9STRA)

HSP 1 Score: 160 bits (405), Expect = 8.700e-45
Identity = 98/210 (46.67%), Postives = 129/210 (61.43%), Query Frame = 0
Query:    6 EEVNKQNLSAKSRDEVEEMLLNATRLFKEKALLAQTLKENIAILLEENRQRVSKWKGMKRYIERRTTMLFNQYLQKKGSAGEVRFNDEEKKLGLTYQKSNTDET-SQCNDVKQLSGGERSFATLALLLALGSQHECPFRVMDEFDVFMDAMSRNIAIKSVIEFAAEFDKRQFIFITPQDLSSVQANTSIKIHKMLPPQKG--DHNQSTLE 212
            EE +K+NLS K  +   +    A      K    +T++ NI +++ + +QR   W+  + +I   T   F+Q L KKGS+GE+ F+   K L LT QK NTD   SQ  DVK LSGGERSF TL+LLLALG   E PFRVMDEFDVF+D MSR IA++++I  A +   RQFIFITPQDLS++Q +  +KI  M  P +      Q TLE
Sbjct:   91 EEKSKKNLSEKDPEVALQKFQRAKTDLDAKYHQIETVQVNIDLMIADVKQRQRTWRKFRSHIANMTNETFDQMLNKKGSSGEIAFDHSAKTLNLTVQKDNTDRNMSQTKDVKALSGGERSFVTLSLLLALGENLETPFRVMDEFDVFLDPMSRKIALETMIHVAKDLGHRQFIFITPQDLSNLQTDPMLKIFCMKNPDRNLQGPTQQTLE 300          
BLAST of mRNA_H-paniculata_contig2359.6370.1 vs. uniprot
Match: A0A7S3UWL6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWL6_HETAK)

HSP 1 Score: 157 bits (397), Expect = 2.730e-44
Identity = 91/204 (44.61%), Postives = 129/204 (63.24%), Query Frame = 0
Query:   11 QNLSAKSRDEVEEMLLNATRLFKEKALLAQTLKENIAILLEENRQRVSKWKGMKRYIERRTTMLFNQYLQKKGSAGEVRFNDEEKKLGLTYQKSNTDETSQCNDVKQLSGGERSFATLALLLALGSQHECPFRVMDEFDVFMDAMSRNIAIKSVIEFA-AEF-DKRQFIFITPQDLSSVQANTS-----IKIHKMLPPQKGDHN 207
            Q L  KS+ E E   L A   +++K    +T   N   L ++  +R+ K+K   ++  R T  +F++YLQ++GS+G + FN  EK L +  QK N DE +Q  D+K LSGGERS  TLALLLALG+  ECPFRVMDEFD+FMDAM+R +A++ VIE   A+F + RQ I ITPQ+L  V+ +       I I ++LPP++ + N
Sbjct:   39 QALQRKSKQECETQYLRAKAKYRDKEDELKTKWTNAMALQKDIAERMDKYKAFSKFFRRSTNHMFDEYLQQRGSSGGIHFNSNEKTLQIVVQKDNMDEATQTTDIKALSGGERSATTLALLLALGANIECPFRVMDEFDIFMDAMARKLAMQQVIEHGMADFMENRQMILITPQNLKDVEDHPKFREGLISIQRLLPPERLNSN 242          
BLAST of mRNA_H-paniculata_contig2359.6370.1 vs. uniprot
Match: A0A7S2C434_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C434_9STRA)

HSP 1 Score: 155 bits (391), Expect = 3.270e-44
Identity = 85/177 (48.02%), Postives = 119/177 (67.23%), Query Frame = 0
Query:   40 QTLKENIAILLEENRQRVSKWKGMKRYIERRTTMLFNQYLQKKGSAGEVRFNDEEKKLGLTYQKSNTDETSQCNDVKQLSGGERSFATLALLLALGSQHECPFRVMDEFDVFMDAMSRNIAIKSVIEFAAEFDKRQFIFITPQDLSSVQANTSIKIHKMLPPQKGDHNQSTLEEAFA 216
            +T+++N   L  +   R  KW+ +++ +   T   F+Q L  KG +G+V F+ ++K L +  QK N D  SQ  D K LSGGERS+ TL+LL++LG   ECPFRVMDEFDVFMDA+SR  A++++IE   ++  RQFIFITPQD+SSV  +  +KIH+M PP + +  Q TLEEA A
Sbjct:    3 KTVQKNCEDLKVDLNARGKKWQKLRKTVANLTNSKFDQTLNAKGHSGQVVFDYDKKTLSVVVQKDNRDSQSQITDPKLLSGGERSYVTLSLLISLGECIECPFRVMDEFDVFMDAVSRKKALETLIETGKKYAHRQFIFITPQDISSVTPSPMVKIHRMRPPGRLN-GQQTLEEAMA 178          
BLAST of mRNA_H-paniculata_contig2359.6370.1 vs. uniprot
Match: A0A7S1W016_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1W016_9STRA)

HSP 1 Score: 167 bits (423), Expect = 4.760e-44
Identity = 87/181 (48.07%), Postives = 127/181 (70.17%), Query Frame = 0
Query:   35 KALLAQTLKENIAILLEENRQRVSKWKGMKRYIERRTTMLFNQYLQKKGSAGEVRFNDEEKKLGLTYQKSNTDETSQCNDVKQLSGGERSFATLALLLALGSQHECPFRVMDEFDVFMDAMSRNIAIKSVIEFAAEFDKRQFIFITPQDLSSVQANTSIKIHKMLPPQK---GDHNQSTLE 212
            K +  +T+++N+  L+ + ++R  +WK  + +I   T + F++ L KKGS+G++ F  E+++L L  QK NT+E SQ  DVK LSGGERSF TL+LLLALG   E PFRVMDEFDVF+D +SR IA+ +++  A E + RQFIFITPQDLSS++ +  +KI K+ PP++   G  +Q TL+
Sbjct:  870 KLIQIETIEKNVNALISDIKERKKRWKLFRAHIAFTTNITFDEMLNKKGSSGQIEFLHEDRRLKLVVQKDNTNEMSQTKDVKALSGGERSFTTLSLLLALGESLETPFRVMDEFDVFLDPVSRKIALDTMVAVAKELEHRQFIFITPQDLSSLKPDRMLKIFKLKPPERNSIGGPSQQTLD 1050          
BLAST of mRNA_H-paniculata_contig2359.6370.1 vs. uniprot
Match: A0A7S2KV92_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KV92_9STRA)

HSP 1 Score: 159 bits (403), Expect = 5.630e-42
Identity = 86/209 (41.15%), Postives = 133/209 (63.64%), Query Frame = 0
Query:    7 EVNKQNLSAKSRDEVEEMLLNATRLFKEKALLAQTLKENIAILLEENRQRVSKWKGMKRYIERRTTMLFNQYLQKKGSAGEVRFNDEEKKLGLTYQKSNTDETSQCNDVKQLSGGERSFATLALLLALGSQHECPFRVMDEFDVFMDAMSRNIAIKSVIEFAAEFDKRQFIFITPQDLSSVQANTSIKIHKMLPPQK----GDHNQSTL 211
            E  ++NLS        +  L A +    K    + +++N+ +L+ + ++R  +W   + +I + T + F+++LQKK SAG V F+ + ++L + +QK NTDE++Q NDVK LSGGERSF TL+LLLA+G   E PFRVMDEFDVF+D ++R  A++++IE +   + RQFIFITPQDLS +  +  +KI  +  P++    G   Q TL
Sbjct:  421 EKKRRNLSEADPVVARDKYLRAKKDLDSKMEQIEAIEQNVKMLIADVKERKRRWIDFRSHIAQMTNLSFDEFLQKKNSAGRVEFDHDNQQLNIIFQKDNTDESTQTNDVKALSGGERSFTTLSLLLAIGESLETPFRVMDEFDVFLDPVARKRALQTLIEVSKNMEHRQFIFITPQDLSQIPTDNKLKIFHLKAPERSNRVGGPQQQTL 629          
BLAST of mRNA_H-paniculata_contig2359.6370.1 vs. uniprot
Match: B8BRT7_THAPS (Smc-like protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRT7_THAPS)

HSP 1 Score: 160 bits (405), Expect = 1.270e-41
Identity = 86/199 (43.22%), Postives = 129/199 (64.82%), Query Frame = 0
Query:    7 EVNKQNLSAKSRDEVEEMLLNATRLFKEKALLAQTLKENIAILLEENRQRVSKWKGMKRYIERRTTMLFNQYLQKKGSAGEVRFNDEEKKLGLTYQKSNTDETSQCNDVKQLSGGERSFATLALLLALGSQHECPFRVMDEFDVFMDAMSRNIAIKSVIEFAAEFDKRQFIFITPQDLSSVQANTSIKIHKMLPPQKGD 205
            E +++NLS       +E  L A +    K +    ++EN   L+ + + R  +W+  + +I +   + F+++L +KGS+GE+ F+ +  +L L  QK N DE SQ  DVK LSGGERSFATL+LLLA+G   E PFRVMDEFDVF+D ++R IA+ +++E A E   RQFIFITPQDLS+++ +  ++I KM  P +G+
Sbjct:  993 ERSRRNLSEADPAVAKEKYLRAKQDLDSKMVQINAIEENTEALMRDLKDRKKRWRQFRSHIAQMANLSFDEFLNRKGSSGEIEFDHDLGQLNLVVQKDNADEGSQTRDVKALSGGERSFATLSLLLAIGESLETPFRVMDEFDVFLDPVARKIALSTLVEVAKEMTHRQFIFITPQDLSALKTDPMLRIFKMKNPGRGN 1191          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2359.6370.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4M2_ECTSI3.660e-7362.62Smc-like protein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
D7G4M1_ECTSI4.280e-5254.75Smc-like protein n=1 Tax=Ectocarpus siliculosus Ta... [more]
F0YEV6_AURAN1.140e-5053.57Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7R9VE37_9STRA3.710e-4550.31Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2W981_9STRA8.700e-4546.67Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S3UWL6_HETAK2.730e-4444.61Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2C434_9STRA3.270e-4448.02Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S1W016_9STRA4.760e-4448.07Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2KV92_9STRA5.630e-4241.15Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B8BRT7_THAPS1.270e-4143.22Smc-like protein n=1 Tax=Thalassiosira pseudonana ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003395RecF/RecN/SMC, N-terminalPFAMPF02463SMC_Ncoord: 40..197
e-value: 3.5E-12
score: 46.2
NoneNo IPR availableGENE3D3.40.50.300coord: 1..208
e-value: 1.8E-26
score: 95.6
NoneNo IPR availablePANTHERPTHR19306STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6coord: 7..206
IPR027132Structural maintenance of chromosomes protein 6PANTHERPTHR19306:SF6STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6coord: 7..206
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 10..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2359contigH-paniculata_contig2359:14008..18921 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2359.6370.1mRNA_H-paniculata_contig2359.6370.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2359 12911..19789 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2359.6370.1 ID=prot_H-paniculata_contig2359.6370.1|Name=mRNA_H-paniculata_contig2359.6370.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=221bp
MKRKAEEVNKQNLSAKSRDEVEEMLLNATRLFKEKALLAQTLKENIAILL
EENRQRVSKWKGMKRYIERRTTMLFNQYLQKKGSAGEVRFNDEEKKLGLT
YQKSNTDETSQCNDVKQLSGGERSFATLALLLALGSQHECPFRVMDEFDV
FMDAMSRNIAIKSVIEFAAEFDKRQFIFITPQDLSSVQANTSIKIHKMLP
PQKGDHNQSTLEEAFANNNS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003395RecF/RecN/SMC_N
IPR027132SMC6
IPR027417P-loop_NTPase