prot_H-paniculata_contig23448.6329.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23448.6329.1
Unique Nameprot_H-paniculata_contig23448.6329.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length59
Homology
BLAST of mRNA_H-paniculata_contig23448.6329.1 vs. uniprot
Match: D7G5G4_ECTSI (Lipid_desat domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G4_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 1.930e-23
Identity = 46/59 (77.97%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 QGLSTVTSPWEAILTAVGLGAGLLLADLVSGVFHWSVDNYGNGTTPVFGAVIEAFQGHH 59
            Q LSTVTSP EA+ TA G   G  +ADLVSGVFHWSVDNYG+G+TPVFGAVIEAFQGHH
Sbjct:   18 QALSTVTSPLEALWTAAGAFVGYTIADLVSGVFHWSVDNYGDGSTPVFGAVIEAFQGHH 76          
BLAST of mRNA_H-paniculata_contig23448.6329.1 vs. uniprot
Match: A0A6H5KFV9_9PHAE (Lipid_desat domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFV9_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 2.030e-21
Identity = 45/59 (76.27%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    1 QGLSTVTSPWEAILTAVGLGAGLLLADLVSGVFHWSVDNYGNGTTPVFGAVIEAFQGHH 59
            Q LSTVTSP EA+ TA G   G  +ADLVSGVFHWSVDNYG+ +TPVFGAVIEAFQGHH
Sbjct:  183 QALSTVTSPLEALWTAAGAFVGYTIADLVSGVFHWSVDNYGDDSTPVFGAVIEAFQGHH 241          
BLAST of mRNA_H-paniculata_contig23448.6329.1 vs. uniprot
Match: A0A061QQN3_9CHLO (Ubiquitin-conjugating enzyme E2 variant n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QQN3_9CHLO)

HSP 1 Score: 72.0 bits (175), Expect = 1.900e-13
Identity = 33/59 (55.93%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    1 QGLSTVTSPWEAILTAVGLGAGLLLADLVSGVFHWSVDNYGNGTTPVFGAVIEAFQGHH 59
            +G S V     A+L    L A  +LADL +G++HW+VDNYG+G TPVFG  IEAFQGHH
Sbjct:  119 KGFSDVDDVETAVLACGSLAASYVLADLGTGIYHWAVDNYGSGRTPVFGKQIEAFQGHH 177          
BLAST of mRNA_H-paniculata_contig23448.6329.1 vs. uniprot
Match: A0A5B8MWA0_9CHLO (Lipid_desat domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MWA0_9CHLO)

HSP 1 Score: 71.6 bits (174), Expect = 2.390e-13
Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 0
Query:    1 QGLSTVTSPWEAILTAVGLGAGLLLADLVSGVFHWSVDNYGNGTTPVFGAVIEAFQGHH 59
            + LSTV S  +A   A+   A  +L+DL SG+FHWSVDNYG+G TP+ G VI AFQGHH
Sbjct:  106 EALSTVDSAGDASAMALSALAAWVLSDLGSGIFHWSVDNYGSGKTPILGNVIAAFQGHH 164          
BLAST of mRNA_H-paniculata_contig23448.6329.1 vs. uniprot
Match: K8YWU6_NANGC (Lipid_desat domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YWU6_NANGC)

HSP 1 Score: 69.7 bits (169), Expect = 7.280e-13
Identity = 30/52 (57.69%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    8 SPWEAILTAVGLGAGLLLADLVSGVFHWSVDNYGNGTTPVFGAVIEAFQGHH 59
            +P +  + A      +L +D  SG+FHWSVDNYGNG TPV G VIEAFQGHH
Sbjct:   43 TPGDLTMLAATTAFSVLFSDFFSGIFHWSVDNYGNGKTPVLGTVIEAFQGHH 94          
BLAST of mRNA_H-paniculata_contig23448.6329.1 vs. uniprot
Match: A0A7S4GDG3_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GDG3_9EUGL)

HSP 1 Score: 70.1 bits (170), Expect = 1.200e-12
Identity = 30/59 (50.85%), Postives = 43/59 (72.88%), Query Frame = 0
Query:    1 QGLSTVTSPWEAILTAVGLGAGLLLADLVSGVFHWSVDNYGNGTTPVFGAVIEAFQGHH 59
            +GL  + +P EA++ A+   A  +LAD  +G+FHWSVDNYG+  TP+ G VI++FQGHH
Sbjct:  184 KGLLQINTPAEALVGAIATLAAYILADAGTGIFHWSVDNYGDKRTPLLGGVIDSFQGHH 242          
BLAST of mRNA_H-paniculata_contig23448.6329.1 vs. uniprot
Match: W7U0R7_9STRA (Kua-ubiquitin conjugating enzyme hybrid, localization n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0R7_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.540e-12
Identity = 30/52 (57.69%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    8 SPWEAILTAVGLGAGLLLADLVSGVFHWSVDNYGNGTTPVFGAVIEAFQGHH 59
            +P +  + A      +L +D  SG+FHWSVDNYGNG TPV G VIEAFQGHH
Sbjct:  155 TPGDLTMLAATTAFSVLFSDFFSGIFHWSVDNYGNGKTPVLGTVIEAFQGHH 206          
BLAST of mRNA_H-paniculata_contig23448.6329.1 vs. uniprot
Match: A0A6S9FHC8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FHC8_HETAK)

HSP 1 Score: 69.3 bits (168), Expect = 1.640e-12
Identity = 31/57 (54.39%), Postives = 38/57 (66.67%), Query Frame = 0
Query:    3 LSTVTSPWEAILTAVGLGAGLLLADLVSGVFHWSVDNYGNGTTPVFGAVIEAFQGHH 59
            +  + +P EAI          + +D  SGVFHWSVDNYGNG TP+ G+VIEAFQGHH
Sbjct:  109 IMAIQTPAEAITMGATFLFSTVFSDFFSGVFHWSVDNYGNGKTPLLGSVIEAFQGHH 165          
BLAST of mRNA_H-paniculata_contig23448.6329.1 vs. uniprot
Match: A0A5J4XEK5_9CHLO (Low CO2-induced protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XEK5_9CHLO)

HSP 1 Score: 69.3 bits (168), Expect = 1.970e-12
Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 0
Query:    1 QGLSTVTSPWEAILTAVGLGAGLLLADLVSGVFHWSVDNYGNGTTPVFGAVIEAFQGHH 59
            QG+S +  P +A +    + A  +LAD  +GV+HWSVDNYG+G TP+ G  I AFQGHH
Sbjct:  130 QGVSGIHGPHQAAVAFAAVSAAYVLADFGTGVYHWSVDNYGSGATPIVGEQIAAFQGHH 188          
BLAST of mRNA_H-paniculata_contig23448.6329.1 vs. uniprot
Match: UPI00053C202E (fatty acid desaturase 4, chloroplastic-like n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C202E)

HSP 1 Score: 68.9 bits (167), Expect = 2.140e-12
Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 0
Query:   22 GLLLADLVSGVFHWSVDNYGNGTTPVFGAVIEAFQGHH 59
            G +LADL SGV+HW +DNYG+G+TPVFGA IEAFQGHH
Sbjct:  114 GYILADLGSGVYHWGIDNYGDGSTPVFGAQIEAFQGHH 151          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23448.6329.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5G4_ECTSI1.930e-2377.97Lipid_desat domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KFV9_9PHAE2.030e-2176.27Lipid_desat domain-containing protein n=1 Tax=Ecto... [more]
A0A061QQN3_9CHLO1.900e-1355.93Ubiquitin-conjugating enzyme E2 variant n=1 Tax=Te... [more]
A0A5B8MWA0_9CHLO2.390e-1357.63Lipid_desat domain-containing protein n=1 Tax=Chlo... [more]
K8YWU6_NANGC7.280e-1357.69Lipid_desat domain-containing protein n=2 Tax=Mono... [more]
A0A7S4GDG3_9EUGL1.200e-1250.85Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
W7U0R7_9STRA1.540e-1257.69Kua-ubiquitin conjugating enzyme hybrid, localizat... [more]
A0A6S9FHC8_HETAK1.640e-1254.39Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A5J4XEK5_9CHLO1.970e-1250.85Low CO2-induced protein n=1 Tax=Trebouxia sp. A1-2... [more]
UPI00053C202E2.140e-1276.32fatty acid desaturase 4, chloroplastic-like n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019547B domain of TMEM189, localisation domainPFAMPF10520TMEM189_B_dmaincoord: 24..59
e-value: 1.3E-14
score: 54.7
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 34..59
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23448contigH-paniculata_contig23448:84..260 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23448.6329.1mRNA_H-paniculata_contig23448.6329.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23448 84..260 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23448.6329.1 ID=prot_H-paniculata_contig23448.6329.1|Name=mRNA_H-paniculata_contig23448.6329.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=59bp
QGLSTVTSPWEAILTAVGLGAGLLLADLVSGVFHWSVDNYGNGTTPVFGA
VIEAFQGHH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019547TMEM189_B_dmain