prot_H-paniculata_contig234.6317.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig234.6317.1
Unique Nameprot_H-paniculata_contig234.6317.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length92
Homology
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BLAST of mRNA_H-paniculata_contig234.6317.1 vs. uniprot
Match: D8LCR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCR0_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 6.320e-6
Identity = 34/78 (43.59%), Postives = 40/78 (51.28%), Query Frame = 0 
Query:   14 PSVDQESKGVAASQIVEAQGRIRPSRPCPNTRSAGNSNTASGGGLTREESRLLIRAELKRAGVSDKINRWNNAGQCWE 91
            PS       V A Q    + R   S P           +  GGGL+REE+RLLIRAELKRAG+SDKI R   + Q  E
Sbjct:  555 PSTSHSQGAVGAVQYGSGKERGADSLP-----------SRGGGGLSREEARLLIRAELKRAGISDKITREEASVQAEE 621
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BLAST of mRNA_H-paniculata_contig234.6317.1 vs. uniprot
Match: A0A6H5KUP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUP0_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 1.610e-5
Identity = 24/28 (85.71%), Postives = 27/28 (96.43%), Query Frame = 0 
Query:   55 GGGLTREESRLLIRAELKRAGVSDKINR 82
            GGGL+REE+RLLIRAELKRAG+SDKI R
Sbjct:  549 GGGLSREETRLLIRAELKRAGISDKITR 576
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig234.6317.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCR0_ECTSI6.320e-643.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUP0_9PHAE1.610e-585.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig234contigH-paniculata_contig234:28064..29169 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig234.6317.1mRNA_H-paniculata_contig234.6317.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig234 28064..29169 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig234.6317.1 ID=prot_H-paniculata_contig234.6317.1|Name=mRNA_H-paniculata_contig234.6317.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=92bp
IGTRQRRTPKNADPSVDQESKGVAASQIVEAQGRIRPSRPCPNTRSAGNS
NTASGGGLTREESRLLIRAELKRAGVSDKINRWNNAGQCWE*
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