prot_H-paniculata_contig23353.6297.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23353.6297.1
Unique Nameprot_H-paniculata_contig23353.6297.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length92
Homology
BLAST of mRNA_H-paniculata_contig23353.6297.1 vs. uniprot
Match: A0A835Z724_9STRA (mTERF-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z724_9STRA)

HSP 1 Score: 130 bits (328), Expect = 2.690e-34
Identity = 59/83 (71.08%), Postives = 76/83 (91.57%), Query Frame = 0
Query:    1 MNFLVEVMGLSVYDVLTFPAYFSYPLQTVIEPRTEFLSIRRRPVTLVGLNIALQSGDSDFARKVAKVRPDVYTEFKQAYLKNR 83
            M++LV +MGLSVYDVLTFPAYFSYPL+++IEPRTEFL +RRRP+ +VGLN+AL SGD+DFA+K+AKVRP++Y  FK AY+K+R
Sbjct:  280 MDYLVAMMGLSVYDVLTFPAYFSYPLESIIEPRTEFLKLRRRPIAVVGLNMALTSGDADFAKKIAKVRPELYASFKAAYMKHR 362          
BLAST of mRNA_H-paniculata_contig23353.6297.1 vs. uniprot
Match: D7FXW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW7_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 3.830e-34
Identity = 64/87 (73.56%), Postives = 75/87 (86.21%), Query Frame = 0
Query:    1 MNFLVEVMGLSVYDVLTFPAYFSYPLQTVIEPRTEFLSIRRRPVTLVGLNIALQSGDSDFARKVAKVRPDVYTEFKQAYLKNRCVAR 87
            M++LVE MGLSVYDVLTFPAYFSYPL TVIEPRTEFL+IR RP+TLVGLNIAL  GD+DFARKVA+V+P VY +FK+AY+  R   +
Sbjct:  529 MDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLAIRGRPITLVGLNIALHQGDADFARKVARVQPRVYQDFKKAYINKRAAVK 615          
BLAST of mRNA_H-paniculata_contig23353.6297.1 vs. uniprot
Match: A0A6H5KUV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUV8_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 4.830e-34
Identity = 64/87 (73.56%), Postives = 75/87 (86.21%), Query Frame = 0
Query:    1 MNFLVEVMGLSVYDVLTFPAYFSYPLQTVIEPRTEFLSIRRRPVTLVGLNIALQSGDSDFARKVAKVRPDVYTEFKQAYLKNRCVAR 87
            M++LVE MGLSVYDVLTFPAYFSYPL TVIEPRTEFL+IR RP+TLVGLNIAL  GD+DFARKVA+V+P VY +FK+AY+  R   +
Sbjct:  989 MDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLAIRGRPITLVGLNIALHQGDADFARKVARVQPRVYQDFKKAYINKRAAVK 1075          
BLAST of mRNA_H-paniculata_contig23353.6297.1 vs. uniprot
Match: R7Q6P9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6P9_CHOCR)

HSP 1 Score: 82.0 bits (201), Expect = 3.090e-16
Identity = 46/92 (50.00%), Postives = 58/92 (63.04%), Query Frame = 0
Query:    1 MNFLVEVMGLSVYDVLTFPAYFSYPLQTVIEPRTEFLSIRRRPVTLVGLNIALQSGDSDFARKVAKVRPDVYTEFKQAYLKNRCVAREKAAL 92
            M ++ + +GLS YD+LTFP YFSY  +  IEPRT+FL  + R VT  GLN+AL   D DF  +VAKV    Y  FK A+L  R    EKAA+
Sbjct:  384 MEYIEQELGLSSYDILTFPGYFSYSFEKCIEPRTKFLQAKGRSVTESGLNMALGLKDEDFCVRVAKVPISQYYAFKAAFLLGR--KNEKAAV 473          
BLAST of mRNA_H-paniculata_contig23353.6297.1 vs. uniprot
Match: A0A7S2Y096_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y096_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 3.730e-12
Identity = 36/81 (44.44%), Postives = 51/81 (62.96%), Query Frame = 0
Query:    1 MNFLVEVMGLSVYDVLTFPAYFSYPLQTVIEPRTEFLSIRRRPVTLVGLNIALQSGDSDFARKVAKVRPDVYTEFKQAYLK 81
            + +  E M L + ++  FPA+FSYPL+T I+ RTEFL+I    ++ VGL   L   D DF++KV KV P  +  FK +YLK
Sbjct:  242 LEYFTEYMDLEIEELERFPAFFSYPLET-IQTRTEFLAILGNSISGVGLRRVLTPSDDDFSKKVVKVNPKFFQLFKNSYLK 321          
BLAST of mRNA_H-paniculata_contig23353.6297.1 vs. uniprot
Match: F0Y3H4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3H4_AURAN)

HSP 1 Score: 67.4 bits (163), Expect = 4.340e-11
Identity = 36/72 (50.00%), Postives = 42/72 (58.33%), Query Frame = 0
Query:    9 GLSVYDVLTFPAYFSYPLQTVIEPRTEFLSIRRRPVTLVGLNIALQSGDSDFARKVAKVRPDVYTEFKQAYL 80
             LSVYDV+ FPAYFSYPL  VI+PRT FL     P+T   L      GD +FA +V  V P  Y  FK+  L
Sbjct:  410 ALSVYDVVRFPAYFSYPLDGVIKPRTAFLKQLGVPITTFPLQALFTPGDKEFASRVLGVDPKRYAAFKKDLL 481          
BLAST of mRNA_H-paniculata_contig23353.6297.1 vs. uniprot
Match: A0A6U2R904_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2R904_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 5.110e-7
Identity = 29/67 (43.28%), Postives = 37/67 (55.22%), Query Frame = 0
Query:    9 GLSVYDVLTFPAYFSYPLQTVIEPRTEFLSIRRRPVTLVGLNIALQSGDSDFARKVAKVRPDVYTEF 75
            G   +DV+ FPA FSYP   +I  R E+L  R  P   VGL+  L SGD+DFAR V     + +  F
Sbjct:  574 GFDYFDVVRFPATFSYPFDRIIVTRFEYLKTRNIPPKAVGLDKILSSGDTDFARIVDNDSGEAFLAF 640          
BLAST of mRNA_H-paniculata_contig23353.6297.1 vs. uniprot
Match: A0A5J4Z0R3_PORPP (Transcription termination factor MTEF1, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0R3_PORPP)

HSP 1 Score: 55.1 bits (131), Expect = 9.510e-7
Identity = 31/74 (41.89%), Postives = 41/74 (55.41%), Query Frame = 0
Query:    2 NFLVEVMGLSVYDVLTFPAYFSYPLQTVIEPRTEFLSIRRRPVTLVGLNIALQSGDSDFARKVAKVRPDVYTEF 75
            ++L   +GLS +D+L FPAYFSY L   I PRT FL      +   GL+ A+   D DF R  A+V  + Y  F
Sbjct:  535 DYLENRLGLSSFDLLIFPAYFSYSLSDRIVPRTLFLKRLGISIADAGLSNAISLTDEDFCRWTARVPREEYDSF 608          
BLAST of mRNA_H-paniculata_contig23353.6297.1 vs. uniprot
Match: B8CBG4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBG4_THAPS)

HSP 1 Score: 53.5 bits (127), Expect = 3.330e-6
Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 0
Query:    2 NFLVEVMGLSVYDVLTFPAYFSYPLQTVIEPRTEFL-SIRRRPVTLVGLNIALQSGDSDFARKVA 65
            NFL EV     ++V+ FPAYFSYPL+ VI+ R  +L   +  P+ L  ++  L+ GD DFA ++A
Sbjct:  608 NFLREVCQFDYFEVVRFPAYFSYPLERVIKMRYSYLRDCKGIPIQLARVDDVLRFGDRDFATEIA 672          
BLAST of mRNA_H-paniculata_contig23353.6297.1 vs. uniprot
Match: A0A7S3JTN4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JTN4_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 2.140e-5
Identity = 27/44 (61.36%), Postives = 31/44 (70.45%), Query Frame = 0
Query:    1 MNFLVEVMGLSVYDVLTFPAYFSYPLQTVIEPRTEFLSIRRRPV 44
            M F V+   LS+YDV+ FPAYFSYPL  VIEPR  FL  R RP+
Sbjct:  411 MTFAVQ-NALSIYDVVRFPAYFSYPLDQVIEPRAAFLQ-RHRPI 452          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23353.6297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A835Z724_9STRA2.690e-3471.08mTERF-domain-containing protein n=1 Tax=Tribonema ... [more]
D7FXW7_ECTSI3.830e-3473.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUV8_9PHAE4.830e-3473.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
R7Q6P9_CHOCR3.090e-1650.00Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S2Y096_9STRA3.730e-1244.44Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0Y3H4_AURAN4.340e-1150.00Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A6U2R904_9STRA5.110e-743.28Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A5J4Z0R3_PORPP9.510e-741.89Transcription termination factor MTEF1, chloroplas... [more]
B8CBG4_THAPS3.330e-643.08Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S3JTN4_9STRA2.140e-561.36Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 1..60
e-value: 1.6E-6
score: 27.3
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 1..78
e-value: 4.0E-11
score: 44.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23353contigH-paniculata_contig23353:2741..3826 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23353.6297.1mRNA_H-paniculata_contig23353.6297.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23353 2741..3829 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23353.6297.1 ID=prot_H-paniculata_contig23353.6297.1|Name=mRNA_H-paniculata_contig23353.6297.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=92bp
MNFLVEVMGLSVYDVLTFPAYFSYPLQTVIEPRTEFLSIRRRPVTLVGLN
IALQSGDSDFARKVAKVRPDVYTEFKQAYLKNRCVAREKAAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR038538MTERF_sf