prot_H-paniculata_contig23201.6247.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23201.6247.1
Unique Nameprot_H-paniculata_contig23201.6247.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length79
Homology
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BLAST of mRNA_H-paniculata_contig23201.6247.1 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 1.360e-5
Identity = 27/56 (48.21%), Postives = 33/56 (58.93%), Query Frame = 0 
Query:   20 ADGEIPRELDEFLVFLERLHTFKTGNNPWGEPPAAVVGDGRNISAVRSYFVDLYRE 75
            A   +P++L+  L  L RL  F    NPW EPP AVV  G  ISAV+ YF DL+ E
Sbjct:  223 AGNALPKQLEALLATLSRLG-FLVHENPWQEPPEAVVSKG--ISAVQEYFTDLFAE 275
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23201.6247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FL98_ECTSI1.360e-548.21LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23201contigH-paniculata_contig23201:547..1073 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23201.6247.1mRNA_H-paniculata_contig23201.6247.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23201 547..1074 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23201.6247.1 ID=prot_H-paniculata_contig23201.6247.1|Name=mRNA_H-paniculata_contig23201.6247.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=79bp
GLWDCGAYAETRHAQDETFADGEIPRELDEFLVFLERLHTFKTGNNPWGE
PPAAVVGDGRNISAVRSYFVDLYREKRVV
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