prot_H-paniculata_contig23185.6242.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23185.6242.1
Unique Nameprot_H-paniculata_contig23185.6242.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length265
Homology
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BLAST of mRNA_H-paniculata_contig23185.6242.1 vs. uniprot
Match: D8LBZ1_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ1_ECTSI)

HSP 1 Score: 291 bits (744), Expect = 4.090e-87
Identity = 170/279 (60.93%), Postives = 197/279 (70.61%), Query Frame = 0 
Query:    2 QGSHHRPKTAKISDA--VTISPPLATGIFGATENEYLNSFFSGFGSCTQIVQEDEIRGAMIHILNGGQFGMSGVSGDDLYGGETFP-----------LPFGEETGMDESKTARDRSSGSSLVEGGVNGSGGARGAGENSSSASERELRQRAQRARLAAGVACLWAGIGVGAMLGGQTVEATKHYAEYAREAIKGCHDVVSEEVLRAFLCLAHMHSFREDFSMFFRYTAIAKNVAASLERQ--GCSEPAKFLLKCFDALGAFLELEGEEAGSPYEVCYAP 265
            +G+H R K A+++D   V ++P   TG  G  EN +LN+FFSGFGSCTQIVQEDEIRGAMIH+L+ GQFGM  V G+  Y   T             +  GEE  +   K  R    G  +  G   G+GG    GE     SE++L+QRAQRARL+AGVACLWAGIGVGAML GQT EAT  YAE AREAIKGC+DVVSEEVLRAFLCLAHMHSFREDF+ FFRYTA+A +VAASL+RQ  GCSEPAKFLLKCFDA+  FLELEGEE+ SP E   AP
Sbjct:  105 EGAHPRLKMARMTDGDVVRLTPSHGTGTLGLEENRHLNAFFSGFGSCTQIVQEDEIRGAMIHVLSDGQFGMPSVDGESFYSPSTDSSSAGGTSTRRGIGVGEEPSL---KLIRLEEGGLGIAAGTPAGAGG----GE-----SEKDLKQRAQRARLSAGVACLWAGIGVGAMLCGQTAEATSGYAENAREAIKGCYDVVSEEVLRAFLCLAHMHSFREDFTKFFRYTAMANDVAASLDRQQQGCSEPAKFLLKCFDAMSHFLELEGEESNSPIEGIIAP 371
[Close]
BLAST of mRNA_H-paniculata_contig23185.6242.1 vs. uniprot
Match: A0A6H5JQB9_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQB9_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 1.070e-63
Identity = 140/244 (57.38%), Postives = 158/244 (64.75%), Query Frame = 0 
Query:   53 DEIRGAMIHILNGGQFGMSGVSGDDLYGGETFPLPFGEETGMDESKTARDRSSGSS-------------LVEGGVNGSGGARGAGENSSSASERELRQRAQRARLAAGVACLWAGIGVGAMLGGQTVEATKHYAEYAREAIKGCHDVVSEEVLRAFLCLAHMHSFREDFSMFFRYTAIAKNVAASLERQ------------------GCSEPAKFLLKCFDALGAFLELEGEEAGSPYEVCYAP 265
            DEIRGAMIH+L+ GQFGM  V G+  Y   T            +S TA   S+GS              L EGG+  + G     +   S  ER+L+QRAQRARL+AGVACLWAGIGVGAML GQT EAT  YAE AREAIKGC+DVVSEEVLRAFLCLAHMHSFREDF+ FFRYTA+A +VAASL+RQ                  GCSEPAKFLLKCFDA+  FLELEGEE+ SP     AP
Sbjct:  105 DEIRGAMIHVLSYGQFGMPSVDGESFYSPST------------DSSTAGGTSTGSGSGVGEEPSLKLIRLKEGGLGIAAGTPAGADGGGS--ERDLKQRAQRARLSAGVACLWAGIGVGAMLCGQTAEATSGYAENAREAIKGCYDVVSEEVLRAFLCLAHMHSFREDFTKFFRYTAMANDVAASLDRQASAKLPQGGSRGSQPKQQGCSEPAKFLLKCFDAMSHFLELEGEESNSPITGIVAP 334
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23185.6242.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBZ1_ECTSI4.090e-8760.93Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5JQB9_9PHAE1.070e-6357.38Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..141
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 162..265
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..161
NoneNo IPR availableTMHMMTMhelixcoord: 144..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23185contigH-paniculata_contig23185:349..3866 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23185.6242.1mRNA_H-paniculata_contig23185.6242.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23185 349..3866 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23185.6242.1 ID=prot_H-paniculata_contig23185.6242.1|Name=mRNA_H-paniculata_contig23185.6242.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=265bp
MQGSHHRPKTAKISDAVTISPPLATGIFGATENEYLNSFFSGFGSCTQIV
QEDEIRGAMIHILNGGQFGMSGVSGDDLYGGETFPLPFGEETGMDESKTA
RDRSSGSSLVEGGVNGSGGARGAGENSSSASERELRQRAQRARLAAGVAC
LWAGIGVGAMLGGQTVEATKHYAEYAREAIKGCHDVVSEEVLRAFLCLAH
MHSFREDFSMFFRYTAIAKNVAASLERQGCSEPAKFLLKCFDALGAFLEL
EGEEAGSPYEVCYAP
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