prot_H-paniculata_contig2314.6227.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2314.6227.1
Unique Nameprot_H-paniculata_contig2314.6227.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length272
Homology
BLAST of mRNA_H-paniculata_contig2314.6227.1 vs. uniprot
Match: D7G4T5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4T5_ECTSI)

HSP 1 Score: 222 bits (565), Expect = 2.080e-64
Identity = 131/268 (48.88%), Postives = 170/268 (63.43%), Query Frame = 0
Query:    8 QGKEVVLDSATGDFYIFDAKSDRWLAEGNVGILKTGAGLGGVAAAILADACGNMEGYGKKRAIPLAELLVRRRDSQLAGDINTKALDRPSTPRQVVVRRRLSRLKRIHRP-AVRVQCKEAIY---ANKLLSPGCVLERSRQ--RVFLPQLSRTITRACTTWGLSWYVFEFHSEVLVRVCPTSILNRLFDHAKGGEFLAWSPGEWSLGKAATVRSRHSFKVLAVSMRAGPEIVEADNCLATRYNVRPAYEGSAGVMRAFVDHKYAVIRE 269
            + KEVVLDSATGDFY+F+ K+DRW+AEGNVGI K+  G+GGVAAAILADA G  +G+G ++  P+ ELL  RR  Q A DI++K L RP TPR+V V      L + HR    R Q  +  +     K  S G VL    +    F   L+    R     GL+  +  F SEVLVRV P S+ +R   H   GEF+AWSPG+WS+G+A   R R +F VLA S RAGPE+VE  NCLATR+NVR  Y+ S G+++AFV+ K+ +IR+
Sbjct:    5 EAKEVVLDSATGDFYVFNFKTDRWVAEGNVGIQKSCGGMGGVAAAILADAAGG-QGHGCEQKFPVNELLGVRRSVQSAADISSKTLQRPKTPRRVHVTGVADVLGQTHRQMGHRSQHSQRSWRRKGRKCTSSGLVLVGGEEIPDTFCTGLTTHPIRGWCRAGLATTLDRFQSEVLVRVRPKSVQHRFLKHVHCGEFIAWSPGKWSIGEATAARCRQTFTVLAASNRAGPEVVEVGNCLATRFNVRHGYQHSTGLLQAFVEDKHILIRD 271          
BLAST of mRNA_H-paniculata_contig2314.6227.1 vs. uniprot
Match: A0A6H5L342_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L342_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 1.910e-57
Identity = 125/268 (46.64%), Postives = 163/268 (60.82%), Query Frame = 0
Query:   10 KEVVLDSATGDFYIFDAKSDRWLAEGNVGILKTGAGLGGVAAAILADACGNMEGYGKKRAIPLAELLVRRRDSQLAGDINTKALDRPSTPRQVVVRRRLSRLKRIHRPAVRVQCKEAIYA-----NKLLSPGCVLERSRQRV---FLPQLSRTITRACTTWGLSWYVFEFHSEVLVRVCPTSILNRLFDHAKGGEFLAWSPGEWSLGKAATVRSRHSFKVLAVSMRAGPEIVEADNCLATRYNVRPAYEGSAGVMRAFVDHKYAVIRE 269
            KEVVLDSATGDFY+FD K+DRW+AEGNVGI K+  G+GG+AAAILADA G  +G+G ++  P+ ELL  RR  Q A DI++K L RP TPR            R+H P V V   +A        +K  +  C++   R+ +   F   L+    R     GL   +  F SEVLVRV P S+ +R   H   GEFLAWSPG+WS+G+A   R R +F VLA S RAGPE+VE  NCLATR++       S  ++RAFV+ K+ +IR+
Sbjct:    5 KEVVLDSATGDFYVFDFKTDRWVAEGNVGIQKSCGGMGGIAAAILADAAGG-QGHGCEQKFPVNELLGVRRSIQSAADISSKTLQRPKTPR------------RVHEPDVAVVLGQAHRQTGHSLSKASAISCLVLVGREEIPDTFGTGLTTHPIRGWCHVGLVTPLDRFQSEVLVRVRPKSVQHRFLKHVHCGEFLAWSPGKWSIGEATAARCRQTFTVLAASNRAGPEVVEIGNCLATRHH-------STSLLRAFVEDKHILIRD 252          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2314.6227.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4T5_ECTSI2.080e-6448.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L342_9PHAE1.910e-5746.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR39746FAMILY NOT NAMEDcoord: 174..268
coord: 4..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2314contigH-paniculata_contig2314:18052..21350 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2314.6227.1mRNA_H-paniculata_contig2314.6227.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2314 18052..21350 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2314.6227.1 ID=prot_H-paniculata_contig2314.6227.1|Name=mRNA_H-paniculata_contig2314.6227.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=272bp
MSHVHQQQGKEVVLDSATGDFYIFDAKSDRWLAEGNVGILKTGAGLGGVA
AAILADACGNMEGYGKKRAIPLAELLVRRRDSQLAGDINTKALDRPSTPR
QVVVRRRLSRLKRIHRPAVRVQCKEAIYANKLLSPGCVLERSRQRVFLPQ
LSRTITRACTTWGLSWYVFEFHSEVLVRVCPTSILNRLFDHAKGGEFLAW
SPGEWSLGKAATVRSRHSFKVLAVSMRAGPEIVEADNCLATRYNVRPAYE
GSAGVMRAFVDHKYAVIREIK*
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