prot_H-paniculata_contig2306.6192.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2306.6192.1 vs. uniprot
Match: D8LGX6_ECTSI (PseudoU_synth_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGX6_ECTSI) HSP 1 Score: 385 bits (990), Expect = 4.290e-125 Identity = 230/519 (44.32%), Postives = 294/519 (56.65%), Query Frame = 0
Query: 70 ATNTANVPRRSSRGASETTLVRGRKVVHIAT---------SHHCGGEMGAARTICDVISIEAGVSLDRADELVRFGAVYIGEDVRP---HASSGGDSQGSRRGGRGDRENRQGGIAGMTDNQHRKMEAKRASGQLPFEGTSFDHMHLRRLRHREGSNPPPAGSYLRVHCDPRLFPVTDRTTWIDQVVVLTDDYIVVNKPAGMPTVPTIDNVIQSVLHQAGLVVARVSGYSDGDADNLPPMHAVSRLDVCTSGLVVFARNKLAAGKLNNMFSARQVTKHYLALLIPGPPIRTGSLAHCCRGKGFDGMRRAKIYADFDPELLEGKKWGGHWQEAHSTVITCVPAAGPTVTAAV---------------------------------------------AADRAAQRLQSSDTLTS-----LGAGKEQQQDGGHPAHLCLLKLDTGRNHQLRMQLAAMGAGIVGDTQYRGIVGRLHRGVPEDDRTDIFGQEPATIALTAARLEFEWNSERVVYTVKPPTWAI 526
A+++A V + ++ETT +VVHIAT G E A TI +++S VS +R ELV+FG+VYIGE V H S + +Q IA + +A +++ Q PF GTSF+HM LRRL E N PP G+YLRVHCDPR FP + W ++V +D++VV+KPAG+PTVPTIDN +Q+ + QA L VA G G PP+HAVSRLDVCTSG+VVFAR+K AA +LN +F AR+V K YLALL PGP + TGS+AHCCR K FDG RR +IYADFD ELL G KWGG WQEA STV+ C PA G AA R + + D T+ A + +++G H HLC ++L+TGR HQLR+QLAAMG+ IVGDT+YRG+VGR+HRG+ DD T FGQEP IAL AAR+EFEW VV++ P+WA+
Sbjct: 13 ASSSAAVTGIAEGCSAETTYQGEHRVVHIATPGAPPPWLEDEEQGEEQRA--TIAELVSHFGAVSRERGVELVKFGSVYIGEVVDTNWRHPPS---------------KEKQMTIAAA------RKKALKSADQAPFRGTSFEHMRLRRLHPWESGNFPPHGAYLRVHCDPRTFPASQVMDWSKRIVHKNEDFVVVDKPAGVPTVPTIDNGVQNCVFQASLAVA---GMPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARRVKKRYLALLTPGPAVPTGSMAHCCRSKAFDGSRRPRIYADFDEELLAGDKWGGAWQEARSTVLLCAPATGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEEIEAAARGGEGREEEDGSTAPDAEATTAAEAAREEGDHAPHLCAMELETGRTHQLRLQLAAMGSAIVGDTRYRGVVGRVHRGLRVDDDTSRFGQEPEAIALQAARIEFEWQGRTVVFSTDRPSWAL 505
BLAST of mRNA_H-paniculata_contig2306.6192.1 vs. uniprot
Match: A0A835YKX4_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKX4_9STRA) HSP 1 Score: 196 bits (499), Expect = 1.290e-53 Identity = 123/307 (40.07%), Postives = 159/307 (51.79%), Query Frame = 0
Query: 219 GSYLRVHCDPRLFPVTDRTTWIDQVVVLTDDYIVVNKPAGMPTVPTIDNVIQSVLHQAGLVVARVSGYSDGDADNLPPMHAVSRLDVCTSGLVVFARNKLAAGKLNNMFSARQVTKHYLALLIPGPPIRTGSLAHCCRGKGFDGMRRAKIYADFDPELLEGKKWGGHWQEAHSTVITCVPAAGPTVTAAVAADRAAQRLQSSDTLTSLGAGKEQQQDGGHPAHLCLLKLDTGRNHQLRMQLAAMGAGIVGDTQYRGIVGRLHRGVPEDDRTDIFGQEPATIALTAARLEFEWNSERVVYTVKPPTWA 525
G+YLR+H PR F W +V+ DY+V++KPAG+P+VPT DN S L +A + GDA P+HAVSRLDVCTSG++VFAR+ AA L+ SAR V K Y ++ G + G L HCC + G + +IYA FD G G W+ A V++ D G A + L TGR HQ+R+QLAA+GAGIVGD++Y I+G++H G DRTD FG EP I L AA LEF+W ERV YT +PP WA
Sbjct: 150 GTYLRLHAAPRRFARAAAADWRARVLHACADYVVIDKPAGVPSVPTTDNAADSALWRARAALG-------GDAAR--PLHAVSRLDVCTSGVLVFARSPAAAAALSGAISARAVRKVY-RVVTTGAEVPLGVLRHCCSTRARTGDAQPRIYAPFDAAKACGD--GSGWRLAELEVLS--------------------------------------HDRGSGAST--ISLMTGRTHQIRLQLAALGAGIVGDSRYADIIGKVHDGTAASDRTDWFGPEPEEIRLHAAALEFDWGGERVCYTAEPP-WA 403
BLAST of mRNA_H-paniculata_contig2306.6192.1 vs. uniprot
Match: A0A5J4Z0G8_PORPP (RNA pseudouridine synthase 6, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0G8_PORPP) HSP 1 Score: 162 bits (409), Expect = 1.910e-40 Identity = 112/331 (33.84%), Postives = 159/331 (48.04%), Query Frame = 0
Query: 219 GSYLRVHCDPRLFPVTDRTTWIDQVVVLTD-DYIVVNKPAGMPTVPTIDNVIQSVLHQAGLVVARVSGYSDGDADNLPPMHAVSRLDVCTSGLVVFARNKLAAGKLNNMFSARQVTKHYLALLIPGPPIRT-----GSLAHCCRGKGFDGMRRAKIYA------DFDPELL---------EGKKWGGHWQEAHSTVITCVPAAGPTVTAAVAADRAAQRLQSSDTLTSLGAGKEQQQDGGHPAHLCLLKLD--TGRNHQLRMQLAAMGAGIVGDTQYRGIVGRLHRGVPEDDRTDIFGQEPATIALTAARLEFE--WNSERVVYTVKPPTW 524
G Y R+H +P +P W D++V D D++ V+KP +P+VPT+ NV++ Q + + P+HAVSRLDVCTSG++VFAR+K AA LN R V K Y LL+PGP R G + H R D + + +IY D D LL E K GG W A ++T +R R + S+ +T Q G +++ TGR HQLR+Q A++G + GD++YR + GR+HRGVPEDD D+FG EP ++L A+ F N R + + P W
Sbjct: 141 GMYFRLHANPARYPDAHAYVWKDRIVYNGDNDFVAVDKPPNLPSVPTLVNVVECARTQVECALECPA-----------PLHAVSRLDVCTSGVLVFARHKRAAAHLNEQIRNRSVKKRY-TLLVPGPIPREIIQKDGRVLHAARTNLPDNIPKPRIYRLLDLEKDLDAALLQDESYSTPLEAPKIGGAWHVAAMRILT---------------EREMNRAELSEVVTM------QADHAGIDVRYTEYEVELLTGRTHQLRLQFASLGLPLFGDSRYRPVSGRVHRGVPEDDNLDMFGPEPNRVSLCASVFHFNDLKNQPREIASGLAPWW 438
BLAST of mRNA_H-paniculata_contig2306.6192.1 vs. uniprot
Match: A0A812T6T9_9DINO (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812T6T9_9DINO) HSP 1 Score: 109 bits (272), Expect = 1.070e-21 Identity = 82/298 (27.52%), Postives = 132/298 (44.30%), Query Frame = 0
Query: 219 GSYLRVHCDPRLFP--VTDRTTWIDQVVVLTDDYIVVNKPAGMPTVPTIDNVIQSVLHQAGLVVARVSGYSDGDADNLPPMHAVSRLDVCTSGLVVFARNKLAAGKLNNMFSARQVTKHYLALLIPGPPIRTGSLAHCCRGKGFDGMRRAKIYADFDPELLEGKKWGGHWQEAHSTVITCVPAAGPTVTAAVAADRAAQRLQSSDTLTSLGAGKEQQQDGGHPAHLCLLKLDTGRNHQLRMQLAAMGAGIVGDTQYRGIVGRLHRGVPEDDRTDIFGQ-----EPATIALTAARLEFE 509
G LRVH +P+ + + W D+++ ++ +Y+VV+KPAG+P P + N + ++ ++ S S G + + A RLDV TSGL + AR++ AA + + QVTK YLA++ G +T L G ++ A + + + W+ A +T+++ TS+ G ++ LL LDTGR HQ+R QLA+MGA +V D Y + L RG +D+ + Q E I L +L FE
Sbjct: 118 GGELRVHTEPKRYRRCSAEGRDWADRLLYVSPEYVVVDKPAGVPCAPHVSNGREWLVPLVAAALSIASRESRGKSSGGEDLVACQRLDVATSGLTLLARSREAAERFRKLLCDGQVTKRYLAVVKTGVKAKTDGLLEHWLSDAVFGRPAPRLVAPLSAPVQDSRH---KWRNARTTILS---------------------------TTSVEDGSQEM----------LLDLDTGRTHQIRAQLASMGAPVVNDGLYSHMANFLWRGPCDDEVAENLVQSATSSEDVDIGLQCTQLSFE 375
BLAST of mRNA_H-paniculata_contig2306.6192.1 vs. uniprot
Match: A0A812V5M1_9DINO (Hypothetical protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812V5M1_9DINO) HSP 1 Score: 110 bits (274), Expect = 2.100e-21 Identity = 82/298 (27.52%), Postives = 132/298 (44.30%), Query Frame = 0
Query: 219 GSYLRVHCDPRLFP--VTDRTTWIDQVVVLTDDYIVVNKPAGMPTVPTIDNVIQSVLHQAGLVVARVSGYSDGDADNLPPMHAVSRLDVCTSGLVVFARNKLAAGKLNNMFSARQVTKHYLALLIPGPPIRTGSLAHCCRGKGFDGMRRAKIYADFDPELLEGKKWGGHWQEAHSTVITCVPAAGPTVTAAVAADRAAQRLQSSDTLTSLGAGKEQQQDGGHPAHLCLLKLDTGRNHQLRMQLAAMGAGIVGDTQYRGIVGRLHRGVPEDDRTDIFGQ-----EPATIALTAARLEFE 509
G LRVH +P+ + + W D+++ ++ +Y+VV+KPAG+P P + N + ++ ++ S S G + + A RLDV TSGL + AR++ AA + + QVTK YLA++ G +T L G ++ A + + + W+ A +T+++ TS+ G ++ LL LDTGR HQ+R QLA+MGA +V D Y + L RG +D+ + Q E I L +L FE
Sbjct: 107 GGELRVHTEPKRYRRCSAEGRDWADRLLYVSPEYVVVDKPAGVPCAPHVSNGREWLVPLVAAALSIASRESRGKSSGGEDLVACQRLDVATSGLTLLARSREAAARFRKLLCDGQVTKRYLAVVKTGVKAKTDGLLEHWLSDAVFGRPAPRLVAPLSAPVQDSRH---KWRNARTTILS---------------------------TTSVEDGSQEM----------LLDLDTGRTHQIRAQLASMGAPVVNDGLYSHMANFLWRGPCDDEVAENLVQSATSSEDGDIGLQCTQLSFE 364
BLAST of mRNA_H-paniculata_contig2306.6192.1 vs. uniprot
Match: A0A1R3I2E3_COCAP (Pseudouridine synthase, RsuA/RluB/C/D/E/F n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3I2E3_COCAP) HSP 1 Score: 107 bits (266), Expect = 4.920e-21 Identity = 93/332 (28.01%), Postives = 135/332 (40.66%), Query Frame = 0
Query: 218 AGSYLRVHCDPRLFPVTDRTTWIDQVVVLTDDYIVVNKPAGMPTVPTIDNVIQSVLHQAGLVVARVSGYSDGDADNLPPMHAVSRLDVCTSGLVVFARNKLAAGKLNNMFSARQVTKHYLALLIPGPPIRTGSLAHCCRGKGFDGMRRAKIYADFDPELLEGKKWGGHWQEAHSTVITCVPAAGPTVTAAVAADRAAQRLQSSDTLTSLGAGKEQQQDGGHP----AHLCLLKLDTGRNHQLRMQLAAMGAGIVGDTQYRGIV------------GRLHRGVPEDDRTDI-------FGQEPATIALTAARLEFEWNSERVVYTVKPPTWAI 526
AG+YLRVH P+ FP W +++ +TD Y+V++KPAG T DN+ +S R G+S P+ ++D CT G VVFAR K + ++V K YLAL P+ TG + H R M + DF ++G W V+ C P D++ E D G P A+ C + L TGR HQ+R QLAA GA IVGD+ Y G+ + EDD+ +G+EP+ +A+ + W+ Y + P W +
Sbjct: 191 AGTYLRVHVHPKRFPRCYAIDWKSRIIAVTDSYVVLDKPAGTSVGGTTDNIEES----CATFATRALGFSI-------PLKTTHQIDNCTEGCVVFARTKEYCSVFHGKIREKKVKKLYLALA--AAPVPTGIITHYMRPIN---MAPRLVSEDF----IKG------WYLCQLEVLECKEVPWP------------------DSVVQENYCIE---DSGWPSKDYAYECKINLLTGRTHQIRAQLAACGAPIVGDSMYMPATIAEMANPGLNPFGKYKKYTTEDDKEIAIKEWIAQYGKEPS-VAIGLQACQISWDEGEHCYEARSPWWRL 474
BLAST of mRNA_H-paniculata_contig2306.6192.1 vs. uniprot
Match: L1JPX0_GUITC (PseudoU_synth_2 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JPX0_GUITC) HSP 1 Score: 102 bits (255), Expect = 1.340e-20 Identity = 85/289 (29.41%), Postives = 129/289 (44.64%), Query Frame = 0
Query: 219 GSYLRVHCDPRLFPVTDRTTWIDQVVVLTDDYIVVNKPAGMPTVPTIDNVIQSVLHQAGLVVARVSGYSDGDADNLPPMHAVSRLDVCTSGLVVFARNKLAAGKLNNMFSARQVTKHYLALLIPGPPIRTGSLAHCCRGKGFDGMRRAKIYADFDPELLEGKKWGGHWQEAHSTVITCVPAAGPTVTAAVAADRAAQRLQSSDTLTSLGAGKEQQQDGGHPAHLCLLKLDTGRNHQLRMQLAAMGAGIVGDTQYRGIVGRLHRGVPE--DDRTDIFGQEPATIALTAAR 505
GSY+RVH P+ + W +V+ + D+IV++KP G+P++ TIDN ++ V+ Q V ++ S + SRLDVCT+G+++FA+ + K N S R+ K YL L P +G D R + EG WQ+A ++ C LT L +QQ G ++L TGR HQ+R+Q AA+GA ++GDT+Y G L + V + D + +FG +P I L A R
Sbjct: 61 GSYVRVHAQPKRCLSVYKIDWSARVIRESQDFIVIDKPPGVPSLTTIDNGVECVMSQ----VEKMRNIS---------LMPTSRLDVCTAGVLIFAKTRDFCLKTNKAMSERRCDKVYLLLSERELP------------RGEDLRSRQDLQE-------EG------WQDAVLEILDC-----------------------RCLLTFLQPFDLKQQGGRRKVFEYSVRLITGRTHQIRLQFAALGAPVLGDTRYTPAAGLLFQSVDDAIGDGSRVFGPDPDVIFLQARR 288
BLAST of mRNA_H-paniculata_contig2306.6192.1 vs. uniprot
Match: A0A3M7KTQ2_AUXPR (PseudoU_synth_2 domain-containing protein (Fragment) n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KTQ2_AUXPR) HSP 1 Score: 103 bits (257), Expect = 2.480e-20 Identity = 89/291 (30.58%), Postives = 126/291 (43.30%), Query Frame = 0
Query: 217 PAGSYLRVHCDPRLFPVTDRTTWIDQVVVLTDDYIVVNKPAGMPTVPTIDNVIQSVLHQAGLVVARVSGYSDGDADNLPPMHAVSRLDVCTSGLVVFARNKLAAGKLNNMFSARQVTKHYLALLIPGPPIRTGSLAHCCRGKGFDGMRRAKIYADFDPELLEGKKWGGHWQEAHSTVITCVPAAGPTVTAAVAADRAAQRLQSSDTLTSLGAGKEQQQDGGHPAHLCLLKLDTGRNHQLRMQLAAMGAGIVGDTQYRGIVGRLHRGVPEDDRTDIFGQEPA-TIALTAARL 506
PAG+YLRVH + FP D W +++ +TD++++VNKP G+P T+DN +SV+ QA P+H + RLD CT G+VV R A ++ + +V K Y L P G L H L G + G HS V P G A + +S+ L S+ G P C+++L TGR HQ+R Q+AA+G +VGDT Y + R + E D+ QEP I L AAR+
Sbjct: 104 PAGAYLRVHAHVKRFPAADCADWAARLLAVTDEHVIVNKPCGVPVPITVDNARESVVTQAS-----------------QPLHIIHRLDRCTEGVVVLGRGVQAVRAFHDAQHSGRVQKTYRLLCHGSQPPPLGLLTH---------------------HLAVGTRIPGC--PIHS-VAHDEPRPGT-----AACSLMIESAESAPALESVHGG---------PVIDCVVRLVTGRTHQIRAQMAAVGHPLVGDTLYGPLARRPGQAPVEVAMGDL--QEPELAIGLQAARM 337
BLAST of mRNA_H-paniculata_contig2306.6192.1 vs. uniprot
Match: UPI000C1CEBF2 (RNA pseudouridine synthase 6, chloroplastic isoform X1 n=2 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CEBF2) HSP 1 Score: 103 bits (257), Expect = 7.610e-20 Identity = 90/332 (27.11%), Postives = 138/332 (41.57%), Query Frame = 0
Query: 218 AGSYLRVHCDPRLFPVTDRTTWIDQVVVLTDDYIVVNKPAGMPTVPTIDNVIQSVLHQAGLVVARVSGYSDGDADNLPPMHAVSRLDVCTSGLVVFARNKLAAGKLNNMFSARQVTKHYLALLIPGPPIRTGSLAHCCRGKGFDGMRRAKIYADF-DPELLEGKKWGGHWQEAHSTVITCVPAAGPTVTAAVAADRAAQRLQSSDTLTSLGAGKEQQQDGGHP----AHLCLLKLDTGRNHQLRMQLAAMGAGIVGDTQYRGIV------------GRLHRGVPEDDRTDIF--------GQEPATIALTAARLEFEWNSERVVYTVKPPTW 524
AG+YLRVH P+ FP W +++ +TD Y+V++KPAG T DN+ +S + A +R G DA P+ ++D CT G VV +R K + ++V K YLAL P+ G + H R +++ D P+ ++G W V+ C P D LT K +D G P A+ C + L TGR HQ+R QLAA GA +VGD+ Y G+ + ++ ++ G+EP+ +A+ + W+ VY + P W
Sbjct: 198 AGTYLRVHVHPKRFPRCYEIDWRSRIIAVTDSYVVLDKPAGTSVGGTTDNIEESCVTFA----SRALGL---DA----PLRTTHQIDNCTEGCVVLSRTKEYCSVFHGKIREKKVKKLYLALA--ADPVSIGVITHYMRPINIAPRLVSEVKPDVVQPDFVKG------WYLCRLEVLECKKVPWP------------------DALTEK---KYSIEDCGWPGKDFAYECKIDLLTGRTHQIRAQLAACGAPLVGDSMYMPAAIAEMRKPGLNPFGKYKKAYATENDKELHVEEWIACHGKEPS-VAIGLQACQISWDEGEHVYEARSPWW 488
BLAST of mRNA_H-paniculata_contig2306.6192.1 vs. uniprot
Match: A0A4Y7JX04_PAPSO (PseudoU_synth_2 domain-containing protein n=3 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7JX04_PAPSO) HSP 1 Score: 102 bits (254), Expect = 1.700e-19 Identity = 90/327 (27.52%), Postives = 138/327 (42.20%), Query Frame = 0
Query: 218 AGSYLRVHCDPRLFPVTDRTTWIDQVVVLTDDYIVVNKPAGMPTVPTIDNVIQSVLHQAGLVVARVSGYSDGDADNLPPMHAVSRLDVCTSGLVVFARNKLAAGKLNNMFSARQVTKHYLALLIPGPPIRTGSLAHCCRGKGFDGMRRAKIYADFDPELLEGKKWGGHWQEAHSTVITCVPAAGPTVTAAVAADRAAQRLQSSDTLTSLGAGKEQQQDGGHPAHLCLLKLDTGRNHQLRMQLAAMGAGIVGDTQY--RGIVGRLHRGV-----------PEDDRTDIF-------GQEPATIALTAARLEFEWNSERVVYTVKPPTW 524
AG+YLRVH P+ FP W +++ +T+ Y++++KPAG T DN+ +S R G +D P+ ++D CT G VV AR K + ++V K YLAL P+ G + H MR + P L+ G W V+ C PT + Q+L+ + + G K+ A+ C + L TG+ HQ+R QLAA+G+ IVGD+ Y I ++ G+ ED+RT G+EP+ IA+ + W+ Y + P W
Sbjct: 196 AGTYLRVHIHPKRFPRCYEIDWKSRIIAVTESYVILDKPAGTSVGGTTDNIEES----CATFATRALGLTD-------PLWTTHQIDNCTEGCVVLARTKQYCSVFHGKIREKKVKKLYLALA--AAPVPVGVVTHY--------MRPVNVA----PRLVSKDITKG-WHMCQLEVLECKEVPWPTASTE-------QKLR----IDNCGWPKKD------VAYECKINLLTGKTHQVRAQLAAIGSPIVGDSMYIPAAIAEAMNPGLNPFGEDGKHYESEDERTKAVEEWMAQHGKEPS-IAIGLQACQISWDDGEHFYEARTPWW 478 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2306.6192.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig2306.6192.1 ID=prot_H-paniculata_contig2306.6192.1|Name=mRNA_H-paniculata_contig2306.6192.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=561bpback to top |