prot_H-paniculata_contig2306.6192.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2306.6192.1
Unique Nameprot_H-paniculata_contig2306.6192.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length561
Homology
BLAST of mRNA_H-paniculata_contig2306.6192.1 vs. uniprot
Match: D8LGX6_ECTSI (PseudoU_synth_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGX6_ECTSI)

HSP 1 Score: 385 bits (990), Expect = 4.290e-125
Identity = 230/519 (44.32%), Postives = 294/519 (56.65%), Query Frame = 0
Query:   70 ATNTANVPRRSSRGASETTLVRGRKVVHIAT---------SHHCGGEMGAARTICDVISIEAGVSLDRADELVRFGAVYIGEDVRP---HASSGGDSQGSRRGGRGDRENRQGGIAGMTDNQHRKMEAKRASGQLPFEGTSFDHMHLRRLRHREGSNPPPAGSYLRVHCDPRLFPVTDRTTWIDQVVVLTDDYIVVNKPAGMPTVPTIDNVIQSVLHQAGLVVARVSGYSDGDADNLPPMHAVSRLDVCTSGLVVFARNKLAAGKLNNMFSARQVTKHYLALLIPGPPIRTGSLAHCCRGKGFDGMRRAKIYADFDPELLEGKKWGGHWQEAHSTVITCVPAAGPTVTAAV---------------------------------------------AADRAAQRLQSSDTLTS-----LGAGKEQQQDGGHPAHLCLLKLDTGRNHQLRMQLAAMGAGIVGDTQYRGIVGRLHRGVPEDDRTDIFGQEPATIALTAARLEFEWNSERVVYTVKPPTWAI 526
            A+++A V   +   ++ETT     +VVHIAT             G E  A  TI +++S    VS +R  ELV+FG+VYIGE V     H  S               + +Q  IA        + +A +++ Q PF GTSF+HM LRRL   E  N PP G+YLRVHCDPR FP +    W  ++V   +D++VV+KPAG+PTVPTIDN +Q+ + QA L VA   G   G     PP+HAVSRLDVCTSG+VVFAR+K AA +LN +F AR+V K YLALL PGP + TGS+AHCCR K FDG RR +IYADFD ELL G KWGG WQEA STV+ C PA G                                                    AA R  +  +  D  T+       A +  +++G H  HLC ++L+TGR HQLR+QLAAMG+ IVGDT+YRG+VGR+HRG+  DD T  FGQEP  IAL AAR+EFEW    VV++   P+WA+
Sbjct:   13 ASSSAAVTGIAEGCSAETTYQGEHRVVHIATPGAPPPWLEDEEQGEEQRA--TIAELVSHFGAVSRERGVELVKFGSVYIGEVVDTNWRHPPS---------------KEKQMTIAAA------RKKALKSADQAPFRGTSFEHMRLRRLHPWESGNFPPHGAYLRVHCDPRTFPASQVMDWSKRIVHKNEDFVVVDKPAGVPTVPTIDNGVQNCVFQASLAVA---GMPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARRVKKRYLALLTPGPAVPTGSMAHCCRSKAFDGSRRPRIYADFDEELLAGDKWGGAWQEARSTVLLCAPATGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEEIEAAARGGEGREEEDGSTAPDAEATTAAEAAREEGDHAPHLCAMELETGRTHQLRLQLAAMGSAIVGDTRYRGVVGRVHRGLRVDDDTSRFGQEPEAIALQAARIEFEWQGRTVVFSTDRPSWAL 505          
BLAST of mRNA_H-paniculata_contig2306.6192.1 vs. uniprot
Match: A0A835YKX4_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKX4_9STRA)

HSP 1 Score: 196 bits (499), Expect = 1.290e-53
Identity = 123/307 (40.07%), Postives = 159/307 (51.79%), Query Frame = 0
Query:  219 GSYLRVHCDPRLFPVTDRTTWIDQVVVLTDDYIVVNKPAGMPTVPTIDNVIQSVLHQAGLVVARVSGYSDGDADNLPPMHAVSRLDVCTSGLVVFARNKLAAGKLNNMFSARQVTKHYLALLIPGPPIRTGSLAHCCRGKGFDGMRRAKIYADFDPELLEGKKWGGHWQEAHSTVITCVPAAGPTVTAAVAADRAAQRLQSSDTLTSLGAGKEQQQDGGHPAHLCLLKLDTGRNHQLRMQLAAMGAGIVGDTQYRGIVGRLHRGVPEDDRTDIFGQEPATIALTAARLEFEWNSERVVYTVKPPTWA 525
            G+YLR+H  PR F       W  +V+    DY+V++KPAG+P+VPT DN   S L +A   +        GDA    P+HAVSRLDVCTSG++VFAR+  AA  L+   SAR V K Y  ++  G  +  G L HCC  +   G  + +IYA FD     G   G  W+ A   V++                                       D G  A    + L TGR HQ+R+QLAA+GAGIVGD++Y  I+G++H G    DRTD FG EP  I L AA LEF+W  ERV YT +PP WA
Sbjct:  150 GTYLRLHAAPRRFARAAAADWRARVLHACADYVVIDKPAGVPSVPTTDNAADSALWRARAALG-------GDAAR--PLHAVSRLDVCTSGVLVFARSPAAAAALSGAISARAVRKVY-RVVTTGAEVPLGVLRHCCSTRARTGDAQPRIYAPFDAAKACGD--GSGWRLAELEVLS--------------------------------------HDRGSGAST--ISLMTGRTHQIRLQLAALGAGIVGDSRYADIIGKVHDGTAASDRTDWFGPEPEEIRLHAAALEFDWGGERVCYTAEPP-WA 403          
BLAST of mRNA_H-paniculata_contig2306.6192.1 vs. uniprot
Match: A0A5J4Z0G8_PORPP (RNA pseudouridine synthase 6, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0G8_PORPP)

HSP 1 Score: 162 bits (409), Expect = 1.910e-40
Identity = 112/331 (33.84%), Postives = 159/331 (48.04%), Query Frame = 0
Query:  219 GSYLRVHCDPRLFPVTDRTTWIDQVVVLTD-DYIVVNKPAGMPTVPTIDNVIQSVLHQAGLVVARVSGYSDGDADNLPPMHAVSRLDVCTSGLVVFARNKLAAGKLNNMFSARQVTKHYLALLIPGPPIRT-----GSLAHCCRGKGFDGMRRAKIYA------DFDPELL---------EGKKWGGHWQEAHSTVITCVPAAGPTVTAAVAADRAAQRLQSSDTLTSLGAGKEQQQDGGHPAHLCLLKLD--TGRNHQLRMQLAAMGAGIVGDTQYRGIVGRLHRGVPEDDRTDIFGQEPATIALTAARLEFE--WNSERVVYTVKPPTW 524
            G Y R+H +P  +P      W D++V   D D++ V+KP  +P+VPT+ NV++    Q    +   +           P+HAVSRLDVCTSG++VFAR+K AA  LN     R V K Y  LL+PGP  R      G + H  R    D + + +IY       D D  LL         E  K GG W  A   ++T               +R   R + S+ +T       Q    G        +++  TGR HQLR+Q A++G  + GD++YR + GR+HRGVPEDD  D+FG EP  ++L A+   F    N  R + +   P W
Sbjct:  141 GMYFRLHANPARYPDAHAYVWKDRIVYNGDNDFVAVDKPPNLPSVPTLVNVVECARTQVECALECPA-----------PLHAVSRLDVCTSGVLVFARHKRAAAHLNEQIRNRSVKKRY-TLLVPGPIPREIIQKDGRVLHAARTNLPDNIPKPRIYRLLDLEKDLDAALLQDESYSTPLEAPKIGGAWHVAAMRILT---------------EREMNRAELSEVVTM------QADHAGIDVRYTEYEVELLTGRTHQLRLQFASLGLPLFGDSRYRPVSGRVHRGVPEDDNLDMFGPEPNRVSLCASVFHFNDLKNQPREIASGLAPWW 438          
BLAST of mRNA_H-paniculata_contig2306.6192.1 vs. uniprot
Match: A0A812T6T9_9DINO (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812T6T9_9DINO)

HSP 1 Score: 109 bits (272), Expect = 1.070e-21
Identity = 82/298 (27.52%), Postives = 132/298 (44.30%), Query Frame = 0
Query:  219 GSYLRVHCDPRLFP--VTDRTTWIDQVVVLTDDYIVVNKPAGMPTVPTIDNVIQSVLHQAGLVVARVSGYSDGDADNLPPMHAVSRLDVCTSGLVVFARNKLAAGKLNNMFSARQVTKHYLALLIPGPPIRTGSLAHCCRGKGFDGMRRAKIYADFDPELLEGKKWGGHWQEAHSTVITCVPAAGPTVTAAVAADRAAQRLQSSDTLTSLGAGKEQQQDGGHPAHLCLLKLDTGRNHQLRMQLAAMGAGIVGDTQYRGIVGRLHRGVPEDDRTDIFGQ-----EPATIALTAARLEFE 509
            G  LRVH +P+ +     +   W D+++ ++ +Y+VV+KPAG+P  P + N  + ++      ++  S  S G +     + A  RLDV TSGL + AR++ AA +   +    QVTK YLA++  G   +T  L          G    ++ A     + + +     W+ A +T+++                            TS+  G ++           LL LDTGR HQ+R QLA+MGA +V D  Y  +   L RG  +D+  +   Q     E   I L   +L FE
Sbjct:  118 GGELRVHTEPKRYRRCSAEGRDWADRLLYVSPEYVVVDKPAGVPCAPHVSNGREWLVPLVAAALSIASRESRGKSSGGEDLVACQRLDVATSGLTLLARSREAAERFRKLLCDGQVTKRYLAVVKTGVKAKTDGLLEHWLSDAVFGRPAPRLVAPLSAPVQDSRH---KWRNARTTILS---------------------------TTSVEDGSQEM----------LLDLDTGRTHQIRAQLASMGAPVVNDGLYSHMANFLWRGPCDDEVAENLVQSATSSEDVDIGLQCTQLSFE 375          
BLAST of mRNA_H-paniculata_contig2306.6192.1 vs. uniprot
Match: A0A812V5M1_9DINO (Hypothetical protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812V5M1_9DINO)

HSP 1 Score: 110 bits (274), Expect = 2.100e-21
Identity = 82/298 (27.52%), Postives = 132/298 (44.30%), Query Frame = 0
Query:  219 GSYLRVHCDPRLFP--VTDRTTWIDQVVVLTDDYIVVNKPAGMPTVPTIDNVIQSVLHQAGLVVARVSGYSDGDADNLPPMHAVSRLDVCTSGLVVFARNKLAAGKLNNMFSARQVTKHYLALLIPGPPIRTGSLAHCCRGKGFDGMRRAKIYADFDPELLEGKKWGGHWQEAHSTVITCVPAAGPTVTAAVAADRAAQRLQSSDTLTSLGAGKEQQQDGGHPAHLCLLKLDTGRNHQLRMQLAAMGAGIVGDTQYRGIVGRLHRGVPEDDRTDIFGQ-----EPATIALTAARLEFE 509
            G  LRVH +P+ +     +   W D+++ ++ +Y+VV+KPAG+P  P + N  + ++      ++  S  S G +     + A  RLDV TSGL + AR++ AA +   +    QVTK YLA++  G   +T  L          G    ++ A     + + +     W+ A +T+++                            TS+  G ++           LL LDTGR HQ+R QLA+MGA +V D  Y  +   L RG  +D+  +   Q     E   I L   +L FE
Sbjct:  107 GGELRVHTEPKRYRRCSAEGRDWADRLLYVSPEYVVVDKPAGVPCAPHVSNGREWLVPLVAAALSIASRESRGKSSGGEDLVACQRLDVATSGLTLLARSREAAARFRKLLCDGQVTKRYLAVVKTGVKAKTDGLLEHWLSDAVFGRPAPRLVAPLSAPVQDSRH---KWRNARTTILS---------------------------TTSVEDGSQEM----------LLDLDTGRTHQIRAQLASMGAPVVNDGLYSHMANFLWRGPCDDEVAENLVQSATSSEDGDIGLQCTQLSFE 364          
BLAST of mRNA_H-paniculata_contig2306.6192.1 vs. uniprot
Match: A0A1R3I2E3_COCAP (Pseudouridine synthase, RsuA/RluB/C/D/E/F n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3I2E3_COCAP)

HSP 1 Score: 107 bits (266), Expect = 4.920e-21
Identity = 93/332 (28.01%), Postives = 135/332 (40.66%), Query Frame = 0
Query:  218 AGSYLRVHCDPRLFPVTDRTTWIDQVVVLTDDYIVVNKPAGMPTVPTIDNVIQSVLHQAGLVVARVSGYSDGDADNLPPMHAVSRLDVCTSGLVVFARNKLAAGKLNNMFSARQVTKHYLALLIPGPPIRTGSLAHCCRGKGFDGMRRAKIYADFDPELLEGKKWGGHWQEAHSTVITCVPAAGPTVTAAVAADRAAQRLQSSDTLTSLGAGKEQQQDGGHP----AHLCLLKLDTGRNHQLRMQLAAMGAGIVGDTQYRGIV------------GRLHRGVPEDDRTDI-------FGQEPATIALTAARLEFEWNSERVVYTVKPPTWAI 526
            AG+YLRVH  P+ FP      W  +++ +TD Y+V++KPAG     T DN+ +S          R  G+S        P+    ++D CT G VVFAR K      +     ++V K YLAL     P+ TG + H  R      M    +  DF    ++G      W      V+ C     P                  D++       E   D G P    A+ C + L TGR HQ+R QLAA GA IVGD+ Y                G+  +   EDD+          +G+EP+ +A+     +  W+     Y  + P W +
Sbjct:  191 AGTYLRVHVHPKRFPRCYAIDWKSRIIAVTDSYVVLDKPAGTSVGGTTDNIEES----CATFATRALGFSI-------PLKTTHQIDNCTEGCVVFARTKEYCSVFHGKIREKKVKKLYLALA--AAPVPTGIITHYMRPIN---MAPRLVSEDF----IKG------WYLCQLEVLECKEVPWP------------------DSVVQENYCIE---DSGWPSKDYAYECKINLLTGRTHQIRAQLAACGAPIVGDSMYMPATIAEMANPGLNPFGKYKKYTTEDDKEIAIKEWIAQYGKEPS-VAIGLQACQISWDEGEHCYEARSPWWRL 474          
BLAST of mRNA_H-paniculata_contig2306.6192.1 vs. uniprot
Match: L1JPX0_GUITC (PseudoU_synth_2 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JPX0_GUITC)

HSP 1 Score: 102 bits (255), Expect = 1.340e-20
Identity = 85/289 (29.41%), Postives = 129/289 (44.64%), Query Frame = 0
Query:  219 GSYLRVHCDPRLFPVTDRTTWIDQVVVLTDDYIVVNKPAGMPTVPTIDNVIQSVLHQAGLVVARVSGYSDGDADNLPPMHAVSRLDVCTSGLVVFARNKLAAGKLNNMFSARQVTKHYLALLIPGPPIRTGSLAHCCRGKGFDGMRRAKIYADFDPELLEGKKWGGHWQEAHSTVITCVPAAGPTVTAAVAADRAAQRLQSSDTLTSLGAGKEQQQDGGHPAHLCLLKLDTGRNHQLRMQLAAMGAGIVGDTQYRGIVGRLHRGVPE--DDRTDIFGQEPATIALTAAR 505
            GSY+RVH  P+      +  W  +V+  + D+IV++KP G+P++ TIDN ++ V+ Q    V ++   S         +   SRLDVCT+G+++FA+ +    K N   S R+  K YL L     P            +G D   R  +         EG      WQ+A   ++ C                          LT L     +QQ G        ++L TGR HQ+R+Q AA+GA ++GDT+Y    G L + V +   D + +FG +P  I L A R
Sbjct:   61 GSYVRVHAQPKRCLSVYKIDWSARVIRESQDFIVIDKPPGVPSLTTIDNGVECVMSQ----VEKMRNIS---------LMPTSRLDVCTAGVLIFAKTRDFCLKTNKAMSERRCDKVYLLLSERELP------------RGEDLRSRQDLQE-------EG------WQDAVLEILDC-----------------------RCLLTFLQPFDLKQQGGRRKVFEYSVRLITGRTHQIRLQFAALGAPVLGDTRYTPAAGLLFQSVDDAIGDGSRVFGPDPDVIFLQARR 288          
BLAST of mRNA_H-paniculata_contig2306.6192.1 vs. uniprot
Match: A0A3M7KTQ2_AUXPR (PseudoU_synth_2 domain-containing protein (Fragment) n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KTQ2_AUXPR)

HSP 1 Score: 103 bits (257), Expect = 2.480e-20
Identity = 89/291 (30.58%), Postives = 126/291 (43.30%), Query Frame = 0
Query:  217 PAGSYLRVHCDPRLFPVTDRTTWIDQVVVLTDDYIVVNKPAGMPTVPTIDNVIQSVLHQAGLVVARVSGYSDGDADNLPPMHAVSRLDVCTSGLVVFARNKLAAGKLNNMFSARQVTKHYLALLIPGPPIRTGSLAHCCRGKGFDGMRRAKIYADFDPELLEGKKWGGHWQEAHSTVITCVPAAGPTVTAAVAADRAAQRLQSSDTLTSLGAGKEQQQDGGHPAHLCLLKLDTGRNHQLRMQLAAMGAGIVGDTQYRGIVGRLHRGVPEDDRTDIFGQEPA-TIALTAARL 506
            PAG+YLRVH   + FP  D   W  +++ +TD++++VNKP G+P   T+DN  +SV+ QA                   P+H + RLD CT G+VV  R   A    ++   + +V K Y  L     P   G L H                      L  G +  G     HS V    P  G       A     +  +S+  L S+  G         P   C+++L TGR HQ+R Q+AA+G  +VGDT Y  +  R  +   E    D+  QEP   I L AAR+
Sbjct:  104 PAGAYLRVHAHVKRFPAADCADWAARLLAVTDEHVIVNKPCGVPVPITVDNARESVVTQAS-----------------QPLHIIHRLDRCTEGVVVLGRGVQAVRAFHDAQHSGRVQKTYRLLCHGSQPPPLGLLTH---------------------HLAVGTRIPGC--PIHS-VAHDEPRPGT-----AACSLMIESAESAPALESVHGG---------PVIDCVVRLVTGRTHQIRAQMAAVGHPLVGDTLYGPLARRPGQAPVEVAMGDL--QEPELAIGLQAARM 337          
BLAST of mRNA_H-paniculata_contig2306.6192.1 vs. uniprot
Match: UPI000C1CEBF2 (RNA pseudouridine synthase 6, chloroplastic isoform X1 n=2 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CEBF2)

HSP 1 Score: 103 bits (257), Expect = 7.610e-20
Identity = 90/332 (27.11%), Postives = 138/332 (41.57%), Query Frame = 0
Query:  218 AGSYLRVHCDPRLFPVTDRTTWIDQVVVLTDDYIVVNKPAGMPTVPTIDNVIQSVLHQAGLVVARVSGYSDGDADNLPPMHAVSRLDVCTSGLVVFARNKLAAGKLNNMFSARQVTKHYLALLIPGPPIRTGSLAHCCRGKGFDGMRRAKIYADF-DPELLEGKKWGGHWQEAHSTVITCVPAAGPTVTAAVAADRAAQRLQSSDTLTSLGAGKEQQQDGGHP----AHLCLLKLDTGRNHQLRMQLAAMGAGIVGDTQYRGIV------------GRLHRGVPEDDRTDIF--------GQEPATIALTAARLEFEWNSERVVYTVKPPTW 524
            AG+YLRVH  P+ FP      W  +++ +TD Y+V++KPAG     T DN+ +S +  A    +R  G    DA    P+    ++D CT G VV +R K      +     ++V K YLAL     P+  G + H  R         +++  D   P+ ++G      W      V+ C     P                  D LT     K   +D G P    A+ C + L TGR HQ+R QLAA GA +VGD+ Y                G+  +    ++  ++         G+EP+ +A+     +  W+    VY  + P W
Sbjct:  198 AGTYLRVHVHPKRFPRCYEIDWRSRIIAVTDSYVVLDKPAGTSVGGTTDNIEESCVTFA----SRALGL---DA----PLRTTHQIDNCTEGCVVLSRTKEYCSVFHGKIREKKVKKLYLALA--ADPVSIGVITHYMRPINIAPRLVSEVKPDVVQPDFVKG------WYLCRLEVLECKKVPWP------------------DALTEK---KYSIEDCGWPGKDFAYECKIDLLTGRTHQIRAQLAACGAPLVGDSMYMPAAIAEMRKPGLNPFGKYKKAYATENDKELHVEEWIACHGKEPS-VAIGLQACQISWDEGEHVYEARSPWW 488          
BLAST of mRNA_H-paniculata_contig2306.6192.1 vs. uniprot
Match: A0A4Y7JX04_PAPSO (PseudoU_synth_2 domain-containing protein n=3 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7JX04_PAPSO)

HSP 1 Score: 102 bits (254), Expect = 1.700e-19
Identity = 90/327 (27.52%), Postives = 138/327 (42.20%), Query Frame = 0
Query:  218 AGSYLRVHCDPRLFPVTDRTTWIDQVVVLTDDYIVVNKPAGMPTVPTIDNVIQSVLHQAGLVVARVSGYSDGDADNLPPMHAVSRLDVCTSGLVVFARNKLAAGKLNNMFSARQVTKHYLALLIPGPPIRTGSLAHCCRGKGFDGMRRAKIYADFDPELLEGKKWGGHWQEAHSTVITCVPAAGPTVTAAVAADRAAQRLQSSDTLTSLGAGKEQQQDGGHPAHLCLLKLDTGRNHQLRMQLAAMGAGIVGDTQY--RGIVGRLHRGV-----------PEDDRTDIF-------GQEPATIALTAARLEFEWNSERVVYTVKPPTW 524
            AG+YLRVH  P+ FP      W  +++ +T+ Y++++KPAG     T DN+ +S          R  G +D       P+    ++D CT G VV AR K      +     ++V K YLAL     P+  G + H         MR   +     P L+      G W      V+ C     PT +         Q+L+    + + G  K+        A+ C + L TG+ HQ+R QLAA+G+ IVGD+ Y    I   ++ G+            ED+RT          G+EP+ IA+     +  W+     Y  + P W
Sbjct:  196 AGTYLRVHIHPKRFPRCYEIDWKSRIIAVTESYVILDKPAGTSVGGTTDNIEES----CATFATRALGLTD-------PLWTTHQIDNCTEGCVVLARTKQYCSVFHGKIREKKVKKLYLALA--AAPVPVGVVTHY--------MRPVNVA----PRLVSKDITKG-WHMCQLEVLECKEVPWPTASTE-------QKLR----IDNCGWPKKD------VAYECKINLLTGKTHQVRAQLAAIGSPIVGDSMYIPAAIAEAMNPGLNPFGEDGKHYESEDERTKAVEEWMAQHGKEPS-IAIGLQACQISWDDGEHFYEARTPWW 478          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2306.6192.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGX6_ECTSI4.290e-12544.32PseudoU_synth_2 domain-containing protein n=2 Tax=... [more]
A0A835YKX4_9STRA1.290e-5340.07Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A5J4Z0G8_PORPP1.910e-4033.84RNA pseudouridine synthase 6, chloroplastic n=1 Ta... [more]
A0A812T6T9_9DINO1.070e-2127.52Hypothetical protein n=2 Tax=Symbiodinium TaxID=29... [more]
A0A812V5M1_9DINO2.100e-2127.52Hypothetical protein n=1 Tax=Symbiodinium necroapp... [more]
A0A1R3I2E3_COCAP4.920e-2128.01Pseudouridine synthase, RsuA/RluB/C/D/E/F n=1 Tax=... [more]
L1JPX0_GUITC1.340e-2029.41PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A3M7KTQ2_AUXPR2.480e-2030.58PseudoU_synth_2 domain-containing protein (Fragmen... [more]
UPI000C1CEBF27.610e-2027.11RNA pseudouridine synthase 6, chloroplastic isofor... [more]
A0A4Y7JX04_PAPSO1.700e-1927.52PseudoU_synth_2 domain-containing protein n=3 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 249..461
e-value: 2.8E-25
score: 89.3
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 218..478
NoneNo IPR availablePANTHERPTHR21600:SF52RNA PSEUDOURIDINE SYNTHASE 6, CHLOROPLASTICcoord: 218..478
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..560
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..24
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.585
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 243..524

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2306contigH-paniculata_contig2306:11838..13766 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2306.6192.1mRNA_H-paniculata_contig2306.6192.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2306 11798..13806 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2306.6192.1 ID=prot_H-paniculata_contig2306.6192.1|Name=mRNA_H-paniculata_contig2306.6192.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=561bp
MVVPLSTTVLAATVAALCPIPVEAFLGMGRLAMLSSPTSVTKPSTSSTET
RQAETFMSMKIVNDPTAVGATNTANVPRRSSRGASETTLVRGRKVVHIAT
SHHCGGEMGAARTICDVISIEAGVSLDRADELVRFGAVYIGEDVRPHASS
GGDSQGSRRGGRGDRENRQGGIAGMTDNQHRKMEAKRASGQLPFEGTSFD
HMHLRRLRHREGSNPPPAGSYLRVHCDPRLFPVTDRTTWIDQVVVLTDDY
IVVNKPAGMPTVPTIDNVIQSVLHQAGLVVARVSGYSDGDADNLPPMHAV
SRLDVCTSGLVVFARNKLAAGKLNNMFSARQVTKHYLALLIPGPPIRTGS
LAHCCRGKGFDGMRRAKIYADFDPELLEGKKWGGHWQEAHSTVITCVPAA
GPTVTAAVAADRAAQRLQSSDTLTSLGAGKEQQQDGGHPAHLCLLKLDTG
RNHQLRMQLAAMGAGIVGDTQYRGIVGRLHRGVPEDDRTDIFGQEPATIA
LTAARLEFEWNSERVVYTVKPPTWAILEKPSAEESTGGSLVDVEGEDNVE
AVGTAVDAVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006145PsdUridine_synth_RsuA/RluA
IPR020103PsdUridine_synth_cat_dom_sf