prot_H-paniculata_contig22995.6159.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22995.6159.1
Unique Nameprot_H-paniculata_contig22995.6159.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length58
Homology
BLAST of mRNA_H-paniculata_contig22995.6159.1 vs. uniprot
Match: D7G1V7_ECTSI (Myb-like DNA-binding domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V7_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 9.260e-21
Identity = 38/56 (67.86%), Postives = 50/56 (89.29%), Query Frame = 0
Query:    3 NDSRRVWLKEEDEAIRTLVGRLGTRSWSAIEENMISEYAIMGRSGKQCRERWHNHL 58
            +++RRVW +EED+AIR LV R GTRSW+ IEE++ ++Y+I+GRSGKQCRERWHNHL
Sbjct:   14 SENRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHL 69          
BLAST of mRNA_H-paniculata_contig22995.6159.1 vs. uniprot
Match: F0YL55_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL55_AURAN)

HSP 1 Score: 85.5 bits (210), Expect = 5.550e-20
Identity = 36/53 (67.92%), Postives = 44/53 (83.02%), Query Frame = 0
Query:    6 RRVWLKEEDEAIRTLVGRLGTRSWSAIEENMISEYAIMGRSGKQCRERWHNHL 58
            RRVW ++ED AI+ LV R GTRSWS I E+++S+Y I GR+GKQCRERWHNHL
Sbjct:    6 RRVWSQQEDSAIKDLVMRYGTRSWSVIAEHIVSDYNIEGRTGKQCRERWHNHL 58          
BLAST of mRNA_H-paniculata_contig22995.6159.1 vs. uniprot
Match: A0A835ZB36_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB36_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.200e-19
Identity = 37/53 (69.81%), Postives = 44/53 (83.02%), Query Frame = 0
Query:    6 RRVWLKEEDEAIRTLVGRLGTRSWSAIEENMISEYAIMGRSGKQCRERWHNHL 58
            RRVW KEEDEAIR LV + GTRSWS I +++  +++I GRSGKQCRERWHNHL
Sbjct:    1 RRVWTKEEDEAIRGLVLQYGTRSWSVIADHIAKDFSIQGRSGKQCRERWHNHL 53          
BLAST of mRNA_H-paniculata_contig22995.6159.1 vs. uniprot
Match: A0A7S1XJ32_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJ32_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 3.270e-19
Identity = 36/55 (65.45%), Postives = 44/55 (80.00%), Query Frame = 0
Query:    4 DSRRVWLKEEDEAIRTLVGRLGTRSWSAIEENMISEYAIMGRSGKQCRERWHNHL 58
            + RRVW KEED AIR LV + GTRSWS I E +++++ I GR+GKQCRERWHNHL
Sbjct:   51 NDRRVWTKEEDHAIRELVAKHGTRSWSVIAERIVTDFNITGRTGKQCRERWHNHL 105          
BLAST of mRNA_H-paniculata_contig22995.6159.1 vs. uniprot
Match: F0YL28_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL28_AURAN)

HSP 1 Score: 81.3 bits (199), Expect = 1.270e-17
Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = 0
Query:    6 RRVWLKEEDEAIRTLVGRLGTRSWSAIEENMISEYAIMGRSGKQCRERWHNHL 58
            RRVW  +ED AIR LV + GTRSWS I E+++ ++ I GR+GKQCRERWHNHL
Sbjct:    7 RRVWTVQEDNAIRQLVMKYGTRSWSVIAEHIVQDFNIDGRTGKQCRERWHNHL 59          
BLAST of mRNA_H-paniculata_contig22995.6159.1 vs. uniprot
Match: D7FMG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG3_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 1.670e-17
Identity = 35/55 (63.64%), Postives = 42/55 (76.36%), Query Frame = 0
Query:    4 DSRRVWLKEEDEAIRTLVGRLGTRSWSAIEENMISEYAIMGRSGKQCRERWHNHL 58
            DSRR W K +D A+R LV   GT++W+ +E+NMIS Y I GRSGKQ RERWHNHL
Sbjct:   21 DSRRPWTKHDDNAVRELVATHGTKNWAVVEQNMISVYGIYGRSGKQSRERWHNHL 75          
BLAST of mRNA_H-paniculata_contig22995.6159.1 vs. uniprot
Match: A0A7S2SND5_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SND5_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.060e-16
Identity = 36/53 (67.92%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    6 RRVWLKEEDEAIRTLVGRLGTRSWSAIEENMISEYAIMGRSGKQCRERWHNHL 58
            RRVW  EEDEAIRTLVG  GT+ WS I   +   Y I GR+GKQCRERWHNHL
Sbjct:   43 RRVWSNEEDEAIRTLVGEQGTKKWSWIATELRQRYNIDGRTGKQCRERWHNHL 95          
BLAST of mRNA_H-paniculata_contig22995.6159.1 vs. uniprot
Match: A0A6H5L4X1_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4X1_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 1.080e-16
Identity = 34/54 (62.96%), Postives = 41/54 (75.93%), Query Frame = 0
Query:    5 SRRVWLKEEDEAIRTLVGRLGTRSWSAIEENMISEYAIMGRSGKQCRERWHNHL 58
            SRR W K +D A+R LV   GT++W+ +E+NMIS Y I GRSGKQ RERWHNHL
Sbjct:    9 SRRPWTKHDDNAVRELVAAHGTKNWAVVEQNMISVYGIYGRSGKQSRERWHNHL 62          
BLAST of mRNA_H-paniculata_contig22995.6159.1 vs. uniprot
Match: W7T303_9STRA (Myb-like dna-binding domain containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T303_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.750e-16
Identity = 36/60 (60.00%), Postives = 44/60 (73.33%), Query Frame = 0
Query:    1 HGNDSRRVWLKEEDEAIRTLVGRLGTRSWSAIEENMISE--YAIMGRSGKQCRERWHNHL 58
            + N  RRVW K+ED++IR LV   GTRSWS I E + S+   +I GR+GKQCRERWHNHL
Sbjct:   85 NSNSDRRVWSKDEDDSIRNLVAAHGTRSWSVIAEKIASDKTLSITGRTGKQCRERWHNHL 144          
BLAST of mRNA_H-paniculata_contig22995.6159.1 vs. uniprot
Match: A0A2R5FYY8_9STRA (Transcription factor MYB118 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FYY8_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 6.990e-16
Identity = 34/58 (58.62%), Postives = 42/58 (72.41%), Query Frame = 0
Query:    1 HGNDSRRVWLKEEDEAIRTLVGRLGTRSWSAIEENMISEYAIMGRSGKQCRERWHNHL 58
            +G+  RR W + ED+AIRTLV   GT+ WS I   +IS+Y I  R+GKQCRERWHNHL
Sbjct:    9 NGSGDRRAWSQREDDAIRTLVKEHGTKRWSTIATRLISDYRIDCRTGKQCRERWHNHL 66          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22995.6159.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1V7_ECTSI9.260e-2167.86Myb-like DNA-binding domain containing protein n=1... [more]
F0YL55_AURAN5.550e-2067.92Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A835ZB36_9STRA2.200e-1969.81Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A7S1XJ32_9STRA3.270e-1965.45Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
F0YL28_AURAN1.270e-1764.15Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
D7FMG3_ECTSI1.670e-1763.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2SND5_9STRA1.060e-1667.92Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A6H5L4X1_9PHAE1.080e-1662.96MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
W7T303_9STRA2.750e-1660.00Myb-like dna-binding domain containing protein n=2... [more]
A0A2R5FYY8_9STRA6.990e-1658.62Transcription factor MYB118 n=1 Tax=Hondaea fermen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 5..58
e-value: 6.0E-6
score: 35.8
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 6..58
e-value: 1.8E-11
score: 44.0
NoneNo IPR availableGENE3D1.10.10.60coord: 6..58
e-value: 2.3E-17
score: 64.7
NoneNo IPR availablePANTHERPTHR45614:SF44TRANSCRIPTION FACTOR MYB119-RELATEDcoord: 9..58
IPR015495Myb-like transcription factorPANTHERPTHR45614FAMILY NOT NAMEDcoord: 9..58
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..58
score: 20.136
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 5..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22995contigH-paniculata_contig22995:3123..3296 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22995.6159.1mRNA_H-paniculata_contig22995.6159.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22995 3123..3296 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22995.6159.1 ID=prot_H-paniculata_contig22995.6159.1|Name=mRNA_H-paniculata_contig22995.6159.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=58bp
HGNDSRRVWLKEEDEAIRTLVGRLGTRSWSAIEENMISEYAIMGRSGKQC
RERWHNHL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR015495Myb-like_TF
IPR017930Myb_dom
IPR009057Homeobox-like_sf