prot_H-paniculata_contig2287.6110.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2287.6110.1
Unique Nameprot_H-paniculata_contig2287.6110.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length222
Homology
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BLAST of mRNA_H-paniculata_contig2287.6110.1 vs. uniprot
Match: D7G4V8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4V8_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 2.120e-47
Identity = 91/119 (76.47%), Postives = 105/119 (88.24%), Query Frame = 0 
Query:    1 GAAGRGEGEGVALPGPDGGVEVKELDGGVLVVRRTAEEKKRSPERLNLHRRQLKSCPVIQGDSRLRLLNYQNNLISKITNLANIPSLIFLDLYNNLIDTLEGPLSAMSALRVVMVGKNK 119
            G  G G   GV LPGP+GGVEV+E  GGVL+VRR+ + KKRSPERLNLHRR L SCP+IQGD+RLRLLNYQNNLI+KITNLAN+P+LIF+DLYNN+IDTLEGPLS M+ALRV+MVGKNK
Sbjct:   59 GVMGVGGENGVLLPGPEGGVEVREFQGGVLLVRRSEDAKKRSPERLNLHRRWLTSCPIIQGDNRLRLLNYQNNLITKITNLANLPNLIFIDLYNNVIDTLEGPLSTMTALRVMMVGKNK 177
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BLAST of mRNA_H-paniculata_contig2287.6110.1 vs. uniprot
Match: A0A6H5JFV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFV0_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 2.260e-45
Identity = 87/113 (76.99%), Postives = 103/113 (91.15%), Query Frame = 0 
Query:    4 GRGEGEGVALPGPDGGVEVKELDGGVLVVRRTAEEKKRSPERLNLHRRQLKSCPVIQGDSRLRLLNYQNNLISKITNLANIPSLIFLDLYNNLIDTLEGPLSAMSALRVVMVG 116
            G G+  GV LPGP+GGVEV+E  GGVL+VRR+ + KKRSPERLNLHRR+L SCP+IQGD+RLRLLNYQNNLISKITNLAN+P+LIF+DLYNN+I+TLEGPLS M+ALRV+MVG
Sbjct:   62 GVGDENGVLLPGPEGGVEVREFHGGVLLVRRSEDAKKRSPERLNLHRRRLTSCPIIQGDNRLRLLNYQNNLISKITNLANLPNLIFIDLYNNVINTLEGPLSTMTALRVMMVG 174
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BLAST of mRNA_H-paniculata_contig2287.6110.1 vs. uniprot
Match: A0A4Q3SRM7_9BACT (Uncharacterized protein n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A4Q3SRM7_9BACT)

HSP 1 Score: 103 bits (257), Expect = 2.790e-22
Identity = 55/81 (67.90%), Postives = 65/81 (80.25%), Query Frame = 0 
Query:   30 LVVRRTAEEKKRSPERLNLHRRQLKSCPVIQGDSRLRLLNYQNNLISKITNLANIPSLIFLDLYNNLIDTLEGPLSAMSAL 110
            LVV RTAEE+ R+PERLNL RRQL+ CP+++ + RLRLLNYQNN I  ITNL N+P+LIFLDLYNN I TLEGPL  +  L
Sbjct:  170 LVVFRTAEERLRNPERLNLDRRQLEFCPLLEQEQRLRLLNYQNNNIKYITNLENLPNLIFLDLYNNKIITLEGPLCQVRGL 250
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BLAST of mRNA_H-paniculata_contig2287.6110.1 vs. uniprot
Match: A0A7S1XLY3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLY3_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.650e-21
Identity = 53/91 (58.24%), Postives = 70/91 (76.92%), Query Frame = 0 
Query:   29 VLVVRRTAEEKKRSPERLNLHRRQLKSCPVIQGDSRLRLLNYQNNLISKITNLANIPSLIFLDLYNNLIDTLEGPLSAMSALRVVMVGKNK 119
            VLVV RT  E+  +PERLNL RRQL SCP+++ + RL+LLNYQNN IS +T L  + +LIFLDLYNN I+ L   LS++ +LRV+M+GKN+
Sbjct:  238 VLVVYRTEGERNANPERLNLDRRQLTSCPILENEDRLKLLNYQNNYISSVTALEPLTNLIFLDLYNNCIEELGPGLSSVPSLRVLMLGKNR 328
[Close]
BLAST of mRNA_H-paniculata_contig2287.6110.1 vs. uniprot
Match: F0YI54_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI54_AURAN)

HSP 1 Score: 99.4 bits (246), Expect = 2.210e-20
Identity = 49/90 (54.44%), Postives = 69/90 (76.67%), Query Frame = 0 
Query:   30 LVVRRTAEEKKRSPERLNLHRRQLKSCPVIQGDSRLRLLNYQNNLISKITNLANIPSLIFLDLYNNLIDTLEGPLSAMSALRVVMVGKNK 119
            LVV R+ EE+  +PERLNL RR L  CP+++ + R+RLLNYQNN I +I +L+++P+LIFLDLYNN I++L   L  +  LRV+M+GKN+
Sbjct:  308 LVVYRSPEERAANPERLNLDRRHLTVCPILKSEERVRLLNYQNNYIEEIRHLSHLPNLIFLDLYNNCIESLSRDLECVPTLRVLMLGKNR 397
[Close]
BLAST of mRNA_H-paniculata_contig2287.6110.1 vs. uniprot
Match: A0A1S3J082_LINUN (uncharacterized protein LOC106168945 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3J082_LINUN)

HSP 1 Score: 95.5 bits (236), Expect = 2.480e-20
Identity = 48/92 (52.17%), Postives = 75/92 (81.52%), Query Frame = 0 
Query:   28 GVLVVRRTAEEKKRSPERLNLHRRQLKSCPVIQGDSRLRLLNYQNNLISKITNLANIPSLIFLDLYNNLIDTLEGPLSAMSALRVVMVGKNK 119
            GV +V RT EE+  +P+RLNL RR+L  CP+++G+ +LRLLNYQ+N+I++I +L+++  LIFLDLY+N I+ + G L+A+ +LRV+M+GKN+
Sbjct:  158 GVPIVYRTPEERAANPDRLNLDRRRLAVCPILEGEEQLRLLNYQHNVITQIQHLSSLKRLIFLDLYDNHIEEISG-LTALRSLRVLMLGKNR 248
[Close]
BLAST of mRNA_H-paniculata_contig2287.6110.1 vs. uniprot
Match: UPI0018D713E7 (leucine-rich repeat-containing protein 49-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D713E7)

HSP 1 Score: 90.5 bits (223), Expect = 7.240e-20
Identity = 46/92 (50.00%), Postives = 70/92 (76.09%), Query Frame = 0 
Query:   28 GVLVVRRTAEEKKRSPERLNLHRRQLKSCPVIQGDSRLRLLNYQNNLISKITNLANIPSLIFLDLYNNLIDTLEGPLSAMSALRVVMVGKNK 119
            GV V+ R+ EE+  +P+RLNL RR+L  CP+++G+  LRLLN+Q+N I KI +L ++  LIFLDLY+N ++ + G L A+ +LRV+M+GKN+
Sbjct:   19 GVPVIYRSQEERSANPDRLNLDRRRLTVCPILEGEEHLRLLNFQHNSIRKIEHLTSLRRLIFLDLYDNQLEDITG-LGALKSLRVLMLGKNR 109
[Close]
BLAST of mRNA_H-paniculata_contig2287.6110.1 vs. uniprot
Match: A0A7S4EZI9_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EZI9_CHRCT)

HSP 1 Score: 90.1 bits (222), Expect = 2.970e-17
Identity = 46/76 (60.53%), Postives = 58/76 (76.32%), Query Frame = 0 
Query:   27 GGVLVVRRTAEEKKRSPERLNLHRRQLKSCPVIQGDSRLRLLNYQNNLISKITNLANIPSLIFLDLYNNLIDTLEG 102
            GGV  V R+  EK  +PERLNL RR L++CPV++G+ RLRLLNYQNN IS I+NL N+P LIFLD+Y+N I  + G
Sbjct:  192 GGVPTVLRSTAEKLANPERLNLDRRSLEACPVLEGEERLRLLNYQNNSISSISNLHNLPHLIFLDMYSNQIKEIAG 267
[Close]
BLAST of mRNA_H-paniculata_contig2287.6110.1 vs. uniprot
Match: A0A1R2CZ17_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CZ17_9CILI)

HSP 1 Score: 89.4 bits (220), Expect = 5.800e-17
Identity = 46/75 (61.33%), Postives = 58/75 (77.33%), Query Frame = 0 
Query:   28 GVLVVRRTAEEKKRSPERLNLHRRQLKSCPVIQGDSRLRLLNYQNNLISKITNLANIPSLIFLDLYNNLIDTLEG 102
            GVLVV R+  E+  +PERLNL RR L   P+++G+ RLRLLNYQ+NLISKI NL ++P+LIFLDLYNN I  + G
Sbjct:   98 GVLVVYRSPSERNTNPERLNLDRRDLTQMPLLEGEERLRLLNYQHNLISKIENLLSLPNLIFLDLYNNQIREING 172
[Close]
BLAST of mRNA_H-paniculata_contig2287.6110.1 vs. uniprot
Match: A0A7S4N260_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4N260_GUITH)

HSP 1 Score: 88.2 bits (217), Expect = 1.530e-16
Identity = 43/66 (65.15%), Postives = 55/66 (83.33%), Query Frame = 0 
Query:   26 DGGVLVVRRTAEEKKRSPERLNLHRRQLKSCPVIQGDSRLRLLNYQNNLISKITNLANIPSLIFLD 91
            +GG LV+ R+ EEK  +PERLNL RR+L  CPV++G+ +LRLLNYQNNLISK+ NL N+P+LIFLD
Sbjct:  210 NGGQLVINRSKEEKFSNPERLNLDRRKLTCCPVLEGEEKLRLLNYQNNLISKVENLDNLPNLIFLD 275
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2287.6110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4V8_ECTSI2.120e-4776.47Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JFV0_9PHAE2.260e-4576.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4Q3SRM7_9BACT2.790e-2267.90Uncharacterized protein n=1 Tax=Chitinophagaceae b... [more]
A0A7S1XLY3_9STRA2.650e-2158.24Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
F0YI54_AURAN2.210e-2054.44Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A1S3J082_LINUN2.480e-2052.17uncharacterized protein LOC106168945 n=1 Tax=Lingu... [more]
UPI0018D713E77.240e-2050.00leucine-rich repeat-containing protein 49-like n=1... [more]
A0A7S4EZI9_CHRCT2.970e-1760.53Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A1R2CZ17_9CILI5.800e-1761.33Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
A0A7S4N260_GUITH1.530e-1665.15Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 151..172
e-value: 11.0
score: 15.0
coord: 129..150
e-value: 48.0
score: 10.0
coord: 195..216
e-value: 3.9
score: 16.5
coord: 173..194
e-value: 110.0
score: 7.0
coord: 107..128
e-value: 480.0
score: 1.9
NoneNo IPR availablePANTHERPTHR45973FAMILY NOT NAMEDcoord: 28..218
NoneNo IPR availablePANTHERPTHR45973:SF8LEUCINE RICH REPEAT CONTAINING 49coord: 28..218
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 44..210
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 195..220
e-value: 7.6
score: 14.3
coord: 84..107
e-value: 270.0
score: 1.5
coord: 151..174
e-value: 8.8
score: 13.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 129..221
e-value: 4.8E-22
score: 79.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 38..128
e-value: 5.8E-12
score: 47.1
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 153..208
e-value: 1.2E-9
score: 37.8
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 197..218
score: 6.642
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 86..107
score: 6.418
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 64..85
score: 7.365
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 175..196
score: 8.297
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 153..174
score: 7.858
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 109..130
score: 5.794
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 131..152
score: 7.989

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2287contigH-paniculata_contig2287:15700..21326 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2287.6110.1mRNA_H-paniculata_contig2287.6110.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2287 15700..21326 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2287.6110.1 ID=prot_H-paniculata_contig2287.6110.1|Name=mRNA_H-paniculata_contig2287.6110.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=222bp
GAAGRGEGEGVALPGPDGGVEVKELDGGVLVVRRTAEEKKRSPERLNLHR
RQLKSCPVIQGDSRLRLLNYQNNLISKITNLANIPSLIFLDLYNNLIDTL
EGPLSAMSALRVVMVGKNKIQKISSMESLCKLDVLDLHSNVIREMQGLST
LQALRVLNLAGNRIRVVKNVSCLKSLTELNLRRNCIEEVRELDALPRLQR
LFLSNNRIHSFQDCDCIFSVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt