prot_H-paniculata_contig22761.6063.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22761.6063.1
Unique Nameprot_H-paniculata_contig22761.6063.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length123
Homology
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BLAST of mRNA_H-paniculata_contig22761.6063.1 vs. uniprot
Match: A0A6H5KR89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR89_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 1.420e-15
Identity = 35/56 (62.50%), Postives = 47/56 (83.93%), Query Frame = 0 
Query:   32 LQERFGGLVDDFREREKDMFFRSKGIEADVESFNWDALRRNTNEIENLQKQAVQRH 87
            L  + G  VD+FREREK+ FF+SKGIE DV+SF+WD LRRNT+EIE LQ++AV+++
Sbjct:   22 LTRKLGAAVDNFREREKETFFKSKGIEGDVDSFDWDELRRNTDEIEQLQREAVEQY 77
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22761.6063.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KR89_9PHAE1.420e-1562.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 76..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22761contigH-paniculata_contig22761:452..2427 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22761.6063.1mRNA_H-paniculata_contig22761.6063.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22761 268..2427 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22761.6063.1 ID=prot_H-paniculata_contig22761.6063.1|Name=mRNA_H-paniculata_contig22761.6063.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=123bp
DGFVRRLEERAEALGGRRAGGQGSTQRKVAPLQERFGGLVDDFREREKDM
FFRSKGIEADVESFNWDALRRNTNEIENLQKQAVQRHRARRQQEEQTNSG
RDPDGGSLYKPSNTRRPPRRHE*
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