prot_H-paniculata_contig2268.6036.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2268.6036.1
Unique Nameprot_H-paniculata_contig2268.6036.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length587
Homology
BLAST of mRNA_H-paniculata_contig2268.6036.1 vs. uniprot
Match: A0A6H5JLQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLQ8_9PHAE)

HSP 1 Score: 218 bits (556), Expect = 2.230e-59
Identity = 222/645 (34.42%), Postives = 277/645 (42.95%), Query Frame = 0
Query:   29 ISIDSQSFVNLGQLIGSRGHDLTDSTMAASGRNSDEKLG----ASASFLSGGGSDSDPESLKDFAQFFHPMPSTATAAANWSSYDLC-----HGGEETGEVRQD----DDDNDSVLPALPR---TP-SPVSLIESDHFRKQTR-------------TDWITDDIKT-------------VNSDDDRAEMSSDEEEVE---DALEHHPSCP-------------TVLEAXXXXXXXXGAMGYGASSCVSVPSLRESWLHVPMDDISKCDPTSTSSDDCGHSIVIAAGVQEHAHQHDADTKEQEEVVATAEGGSPPDGCVARDDCGCCFACMLDNVIALARPRFERLSKFAKRPIGEVGAEAYVKAQEVCSRGQAAVTQAVDSVPQAPVRKWLSRMASSLVLGAILGGVVTYYVFPRVITSVYSSC---DSTFNVGATDGARPGPDAWGAAGAAAQSTDRHRQQERSDASVDPEESFGMRLNNALFAARAGEAAAQQGLLEEVRNILAATGKSGGISAEQLLRQFNAKRFAEASKAWSATEGVVGG----DPLFYMPPNRPPSFSAPDASXXXXXXXXXXXXGASIKMECS-------------------TDDIASCKTESTGG--GSANRGSTRPHRACRGGGWIC 586
            +S+DSQSFVNLGQL+GSR                  + G    A  SFLS    D D E L+DF Q FHP  +T+T+ A  S  +L       GG        D    DDDNDSVLPALP    TP SP     S+     +                W+ DD  +              + D   A   + E  +    D   H  + P             +V +          A G  A+S  S P LRESWLHVP+ D    D   +                                              A  DCG C    +    ALA+ R   + +  K  + + GA+A       CSRGQ A  +AVDSVPQAPVR WL R+A S+V+G +LG   T+       T + S C   D+T    +T GA    D+ GA GA                    ++SFG RL+ ALFAARAGEAAAQQGLLE++RNILAATG+SGGISAEQ+LRQFNAKRF EASKAWSA EG V G    DPLF+ PP  P + SA  AS            GA+   +C+                    D + +   ES     G  + G     R C GGGW+C
Sbjct:   32 MSVDSQSFVNLGQLMGSRHGXXXXXXXXXXXXXXTTRTGLEDFACTSFLSD--DDDDSEGLRDFDQIFHPA-ATSTSGARSSGRELYGQQRHRGGGAADHQHGDGGVLDDDNDSVLPALPSRSSTPGSPRGYSTSNSGNSSSSKPYFIAPAASAAGAGWVEDDFGSGASARRGGGRVGHASCDHRLATGGAPENNLPQNTDITTHTKTTPAAGITSPEIQPGGSVAQQSGTSQTAATAGGETAASGSSTPFLRESWLHVPVGDD---DEIKSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAQALGDCGDCLVRGVGRAGALAKARALEVGRAVKVHV-DAGADA-------CSRGQKAAVKAVDSVPQAPVRVWLGRVALSIVVGIVLGSAATFCALRAATTKMGSVCAGADATSPWWSTGGAG---DSVGAGGA--------------------DQSFGDRLDKALFAARAGEAAAQQGLLEDMRNILAATGESGGISAEQILRQFNAKRFKEASKAWSAAEGNVAGSDPLDPLFFAPPTAPVNPSA-SASQQPQPSSSSIPHGATPATDCAGGASGSTFCSADSGXXXXXXDSVRANMAESVRRVKGFRDGGRQEYRRHCGGGGWVC 638          
BLAST of mRNA_H-paniculata_contig2268.6036.1 vs. uniprot
Match: D7G052_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G052_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 2.440e-31
Identity = 85/176 (48.30%), Postives = 101/176 (57.39%), Query Frame = 0
Query:  438 EESFGMRLNNALFAARAGEAAAQQGLLEEVRNILAATGKSGGISAEQLLRQFNAKRFAEASKAWSATEGVVGG----DPLFYMPPNRPPSFSAPDASXXXXXXXXXXXXGASIKMECS--TDDIASCKTESTGG---------------------GSANRGSTRPHRACRGGGWIC 586
            ++SFG RL+ ALFAARAGEAAAQQGLLE++RNILAATG+SGGISAEQ+LRQFNAKRF EASKAWSA EG V G    DPLF+ PP  P + SA  +S            GA+   +C+      A C  +S                        G  + G     R C GGGW+C
Sbjct:   47 DQSFGDRLDKALFAARAGEAAAQQGLLEDMRNILAATGESGGISAEQILRQFNAKRFKEASKAWSAAEGNVAGSDPLDPLFFAPPTAPVNPSA-SSSQQPQPSSSSVPHGATPATDCAGGASGSAFCSADSXXXXXXXXXDSVRANMAESVRRAKGFRDGGRQEYRRHCGGGGWVC 221          
BLAST of mRNA_H-paniculata_contig2268.6036.1 vs. uniprot
Match: D7G053_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G053_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 6.130e-9
Identity = 112/391 (28.64%), Postives = 146/391 (37.34%), Query Frame = 0
Query:   29 ISIDSQSFVNLGQLIGSRGHDLTDSTMAASGRNSDEKLG----ASASFLSGGGSDSDPESLKDFAQFFHPMPSTATAAANWSSYDLCHGGE----------ETGEVRQDDDDNDSVLPALPR---TP-SPVSLIESDHFRKQTR-------------TDWITDDIKT---VNSDDDRAEMSSDEEEVED--ALEHH------------PSCPTVLEAXXXXXXXXG--------------AMG--YGASSCVSVPSLRESWLHVPMDDISKCDPTSTSSDDCGHSIVIAAGVQEHAHQHDADTKEQEEVVATAEGGSPPDGCVARDDCGCCFACMLDNVIALARPRFERLSKFAKRPIGEVGAEAYVKAQEVCSRGQAAVTQAVDSVPQAP 355
            +S+DSQSFVNLGQL+GSR                  + G    A  SFLS    D D E L+DF Q FHP  +T+T+ A WSS    +G +          + G+    DDDNDSVLPALP    TP SP   + S+     +                W+ +D  +         R   +S +  +    ALE++             + P    A        G              A G    A+S  S P LRESWLHVP+ D    D   + +                                            A  DCG C    +    ALA+ R     +  K  + E GA+A       CSRGQ A  +AVDSVPQAP
Sbjct:   69 MSVDSQSFVNLGQLMGSRHGXXXXXXXXXXXXXXXXRTGLDDLACTSFLSD--DDDDSEGLRDFDQIFHPA-ATSTSGA-WSSGRELYGQQRHRGGGAVDHQHGDGGAFDDDNDSVLPALPSRSSTPGSPRGYLTSNSGNSSSSKPYFVASAASAAGAGWVEEDFGSGAGARRGGGRVGHASCDHRLATGGALENNLTQNTDTTTHTKATAPAAAAAITSPEIQPGGSLTQQSGTSRTAAAAGGEIAAASGSSTPFLRESWLHVPIGDE---DEIKSEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAQALGDCGDCLVRGVGRAGALAKARALEFGRAVKVQV-EAGADA-------CSRGQKAAVKAVDSVPQAP 444          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2268.6036.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JLQ8_9PHAE2.230e-5934.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G052_ECTSI2.440e-3148.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G053_ECTSI6.130e-928.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..362
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 363..382
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 383..586

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2268contigH-paniculata_contig2268:14507..17854 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2268.6036.1mRNA_H-paniculata_contig2268.6036.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2268 14332..19497 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2268.6036.1 ID=prot_H-paniculata_contig2268.6036.1|Name=mRNA_H-paniculata_contig2268.6036.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=587bp
MADISCKSKKEQGEQPATATSTSLINSTISIDSQSFVNLGQLIGSRGHDL
TDSTMAASGRNSDEKLGASASFLSGGGSDSDPESLKDFAQFFHPMPSTAT
AAANWSSYDLCHGGEETGEVRQDDDDNDSVLPALPRTPSPVSLIESDHFR
KQTRTDWITDDIKTVNSDDDRAEMSSDEEEVEDALEHHPSCPTVLEAAAA
AAAAGGAMGYGASSCVSVPSLRESWLHVPMDDISKCDPTSTSSDDCGHSI
VIAAGVQEHAHQHDADTKEQEEVVATAEGGSPPDGCVARDDCGCCFACML
DNVIALARPRFERLSKFAKRPIGEVGAEAYVKAQEVCSRGQAAVTQAVDS
VPQAPVRKWLSRMASSLVLGAILGGVVTYYVFPRVITSVYSSCDSTFNVG
ATDGARPGPDAWGAAGAAAQSTDRHRQQERSDASVDPEESFGMRLNNALF
AARAGEAAAQQGLLEEVRNILAATGKSGGISAEQLLRQFNAKRFAEASKA
WSATEGVVGGDPLFYMPPNRPPSFSAPDASQQQQQQQYYSNNGASIKMEC
STDDIASCKTESTGGGSANRGSTRPHRACRGGGWIC*
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