prot_H-paniculata_contig22585.6014.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22585.6014.1
Unique Nameprot_H-paniculata_contig22585.6014.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length54
Homology
BLAST of mRNA_H-paniculata_contig22585.6014.1 vs. uniprot
Match: A0A6H5JSC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC0_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 1.240e-8
Identity = 31/54 (57.41%), Postives = 35/54 (64.81%), Query Frame = 0
Query:    1 VAYYGLLQLFLTRRAVYLLVWDASQEGSRETATGGTMGELETLGILPWLRAFSF 54
            V YYGLLQLFLT RAVY+LVWDA++    E         LE LGI PWLR  +F
Sbjct:  146 VVYYGLLQLFLTPRAVYMLVWDAAKASEMEGLN------LEDLGIAPWLRYLTF 193          
BLAST of mRNA_H-paniculata_contig22585.6014.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 4.360e-8
Identity = 31/54 (57.41%), Postives = 34/54 (62.96%), Query Frame = 0
Query:    1 VAYYGLLQLFLTRRAVYLLVWDASQEGSRETATGGTMGELETLGILPWLRAFSF 54
            V YYGLLQLFLT RAVYLLVWDA++    E         LE L I PWLR  +F
Sbjct:  436 VVYYGLLQLFLTPRAVYLLVWDAAKASEMEGLN------LEDLAIAPWLRHLTF 483          
BLAST of mRNA_H-paniculata_contig22585.6014.1 vs. uniprot
Match: A0A6H5JQZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ5_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 5.900e-8
Identity = 30/53 (56.60%), Postives = 33/53 (62.26%), Query Frame = 0
Query:    2 AYYGLLQLFLTRRAVYLLVWDASQEGSRETATGGTMGELETLGILPWLRAFSF 54
            AYYGLLQLFLT RAVYLLVWDA +    +         LE L I PWLR  +F
Sbjct:  298 AYYGLLQLFLTPRAVYLLVWDAEKASQMDELN------LEDLAIAPWLRQMTF 344          
BLAST of mRNA_H-paniculata_contig22585.6014.1 vs. uniprot
Match: A0A6H5JRW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRW5_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 5.950e-8
Identity = 30/53 (56.60%), Postives = 33/53 (62.26%), Query Frame = 0
Query:    2 AYYGLLQLFLTRRAVYLLVWDASQEGSRETATGGTMGELETLGILPWLRAFSF 54
            AYYGLLQLFLT RAVYLLVWDA +    +         LE L I PWLR  +F
Sbjct:  136 AYYGLLQLFLTPRAVYLLVWDAEKASQMDELN------LEDLAIAPWLRQMTF 182          
BLAST of mRNA_H-paniculata_contig22585.6014.1 vs. uniprot
Match: A0A6H5KM38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM38_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 1.060e-7
Identity = 29/54 (53.70%), Postives = 34/54 (62.96%), Query Frame = 0
Query:    1 VAYYGLLQLFLTRRAVYLLVWDASQEGSRETATGGTMGELETLGILPWLRAFSF 54
            + YYGLLQLFLT RAVYLLVWDA++    +         LE L I PWLR  +F
Sbjct:   68 IVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLN------LEDLAIAPWLRYLTF 115          
BLAST of mRNA_H-paniculata_contig22585.6014.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 1.120e-7
Identity = 30/54 (55.56%), Postives = 34/54 (62.96%), Query Frame = 0
Query:    1 VAYYGLLQLFLTRRAVYLLVWDASQEGSRETATGGTMGELETLGILPWLRAFSF 54
            V YYGLLQLFLT RAVYLLVWDA++    +         LE L I PWLR  +F
Sbjct:  508 VVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLN------LEDLAIAPWLRYLTF 555          
BLAST of mRNA_H-paniculata_contig22585.6014.1 vs. uniprot
Match: D7FX69_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 1.120e-7
Identity = 30/54 (55.56%), Postives = 34/54 (62.96%), Query Frame = 0
Query:    1 VAYYGLLQLFLTRRAVYLLVWDASQEGSRETATGGTMGELETLGILPWLRAFSF 54
            V YYGLLQLFLT RAVYLLVWDA++    +         LE L I PWLR  +F
Sbjct:  601 VVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLN------LEDLAIAPWLRYLTF 648          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22585.6014.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JSC0_9PHAE1.240e-857.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJV1_ECTSI4.360e-857.41LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JQZ5_9PHAE5.900e-856.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRW5_9PHAE5.950e-856.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KM38_9PHAE1.060e-753.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX56_ECTSI1.120e-755.56LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FX69_ECTSI1.120e-755.56LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22585contigH-paniculata_contig22585:2874..3035 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22585.6014.1mRNA_H-paniculata_contig22585.6014.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22585 2874..3037 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22585.6014.1 ID=prot_H-paniculata_contig22585.6014.1|Name=mRNA_H-paniculata_contig22585.6014.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=54bp
VAYYGLLQLFLTRRAVYLLVWDASQEGSRETATGGTMGELETLGILPWLR
AFSF
back to top