prot_H-paniculata_contig2238.5958.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2238.5958.1
Unique Nameprot_H-paniculata_contig2238.5958.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length149
Homology
BLAST of mRNA_H-paniculata_contig2238.5958.1 vs. uniprot
Match: D8LS82_ECTSI (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS82_ECTSI)

HSP 1 Score: 182 bits (461), Expect = 1.010e-54
Identity = 86/147 (58.50%), Postives = 104/147 (70.75%), Query Frame = 0
Query:    1 MVAIDVGGAMKPGPLGAMCMISYQMWLILAFLAGKPIGNWMAGGFARLIDAPNGRRIAKASSCYPYYQVWKHAIRHG--AGSMMPDCPLMFIHGRAGMKKIMTFHSDRWLEKVAAKEGSVVVPVDEADHWVHWDAADRVNSELDTFL 145
            MVAIDVGGAMKP   GAM M++YQ+WL  AFL G+PIG+ +A  FA L+ +P+G RIA+AS+CYPYY  WKH +  G     MMP CPLMF+HG AG+KKIMTFH+ RW EKV  KEGS    + +A HWV  D  + VN  LD FL
Sbjct:  122 MVAIDVGGAMKPSICGAMLMVTYQLWLCAAFLLGRPIGDGIARSFAWLMGSPSGARIARASTCYPYYHTWKHILCSGEKVRPMMPQCPLMFLHGTAGVKKIMTFHAARWAEKVQEKEGSSSQGIPQASHWVTRDQPEEVNRRLDEFL 268          
BLAST of mRNA_H-paniculata_contig2238.5958.1 vs. uniprot
Match: D8LK39_ECTSI (Short chain dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK39_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 1.270e-38
Identity = 71/149 (47.65%), Postives = 97/149 (65.10%), Query Frame = 0
Query:    1 MVAIDVGGAMKPGP-LGAMCMISYQMWLILAFLAGKPIGNWMAGGFARLIDAPNGRRIAKASSCYPYYQVWKHAIRH--GAGSMMPDCPLMFIHGRAGMKKIMTFHSDRWLEKVAAKEGSVVVPVDEADHWV-HWDAADRVNSELDTFL 145
            +VA+DVGG +   P L  + +  YQ +L++AFL G  IG+ MA GFARL  AP    +A+AS CYPY   WK  I+   G G  MP CP++F++G AGMKK+M FH+D W++K++ ++GS VV V EA HW+      D VN+ LDTF 
Sbjct:  119 LVALDVGGGLSFWPSLSLLSIALYQTYLMVAFLIGGRIGDAMARGFARLAGAPAASTVARASVCYPYIHFWKSQIQTCLGMGPFMPRCPVLFMYGSAGMKKLMRFHADWWVDKISKRKGSSVVEVTEASHWLMRGRGGDVVNARLDTFF 267          
BLAST of mRNA_H-paniculata_contig2238.5958.1 vs. uniprot
Match: A0A843SII8_9BURK (Alpha/beta fold hydrolase n=2 Tax=Rugamonas TaxID=212744 RepID=A0A843SII8_9BURK)

HSP 1 Score: 75.5 bits (184), Expect = 1.620e-13
Identity = 52/155 (33.55%), Postives = 75/155 (48.39%), Query Frame = 0
Query:    1 MVAIDVGGAMKPG-----PLGAMCMIS-YQMWLILAFLAGKPIGNWMAGGFARLIDAPNGRRIAKASSCYPYYQVWKHAIRHGAGSMM----PDCPLMFIHGRAGMKKIMTFHSDRWLEKVAAKEGSVVVPVDEADHWVHWDAADRVNSELDTFL 145
            ++ +D+G A          L    M+S YQ  L LA+  G PIGN M    AR++  P+          +PYY +   A   G+   M    P  P++FI+G   ++K   FHSD W++K+AAKEG  VV  D  DHW      +R N  +  +L
Sbjct:  113 IIGVDIGDAQSKAVRNSRSLSQKMMVSGYQGTLALAWAIGGPIGNMMTRSMARMLKVPSPPEFISVKMNFPYYIM--AAGEAGSYRTMTPFAPKVPVLFIYG---VRKPFMFHSDSWVDKLAAKEGCKVVAFD-TDHWPMLRQPERFNEVVLDWL 261          
BLAST of mRNA_H-paniculata_contig2238.5958.1 vs. uniprot
Match: A0A0P0MGK7_9BURK (Haloalkane dehalogenase n=3 Tax=unclassified Limnohabitans TaxID=2626134 RepID=A0A0P0MGK7_9BURK)

HSP 1 Score: 66.6 bits (161), Expect = 2.770e-10
Identity = 49/165 (29.70%), Postives = 75/165 (45.45%), Query Frame = 0
Query:    1 MVAIDVGGAMKPGPLGAMC------MISYQMWLILAF-------LAGKPIGNWMAGGFARLIDAPNGRRIAKASSCYPYYQVWKHAIRH-----GAGSMMPDC-PLMFIHGRAGMKKIMTFHSDRWLEKVAAKEGSVVVPVDEADHWVHWDAADRVNSELDTFLG 146
            MVA+DVG         ++       + SYQ+WL LA+         G+P+ N M    A+ +  P+           PY   W   +        A  ++P   P+++I+G+   +K   FHS+RWLEK+AA  GS V   D   HWV  +  ++ N  L  +LG
Sbjct:  111 MVAVDVGDHNSKALHASLSGKAKWGVFSYQIWLALAWQLVNIFGAMGRPLANRMTRYMAKALRCPSPLGDMHVGMNVPYAMKWMGTLEGFELACNALKILPTARPMLYIYGK---RKPFMFHSERWLEKIAAHPGSRVEGFD-TGHWVMSNKPEQFNELLKEWLG 271          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2238.5958.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LS82_ECTSI1.010e-5458.50AB hydrolase-1 domain-containing protein n=2 Tax=E... [more]
D8LK39_ECTSI1.270e-3847.65Short chain dehydrogenase n=1 Tax=Ectocarpus silic... [more]
A0A843SII8_9BURK1.620e-1333.55Alpha/beta fold hydrolase n=2 Tax=Rugamonas TaxID=... [more]
A0A0P0MGK7_9BURK2.770e-1029.70Haloalkane dehalogenase n=3 Tax=unclassified Limno... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029058Alpha/Beta hydrolase foldGENE3D3.40.50.1820coord: 10..146
e-value: 1.2E-8
score: 36.7
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 15..145
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 34..148
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..33
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2238contigH-paniculata_contig2238:16934..18175 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2238.5958.1mRNA_H-paniculata_contig2238.5958.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2238 15866..22069 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2238.5958.1 ID=prot_H-paniculata_contig2238.5958.1|Name=mRNA_H-paniculata_contig2238.5958.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=149bp
MVAIDVGGAMKPGPLGAMCMISYQMWLILAFLAGKPIGNWMAGGFARLID
APNGRRIAKASSCYPYYQVWKHAIRHGAGSMMPDCPLMFIHGRAGMKKIM
TFHSDRWLEKVAAKEGSVVVPVDEADHWVHWDAADRVNSELDTFLGGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase