prot_H-paniculata_contig2227.5920.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2227.5920.1
Unique Nameprot_H-paniculata_contig2227.5920.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length465
Homology
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BLAST of mRNA_H-paniculata_contig2227.5920.1 vs. uniprot
Match: A0A6H5JAL8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAL8_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 1.110e-26
Identity = 128/213 (60.09%), Postives = 147/213 (69.01%), Query Frame = 0 
Query:  206 QNMECDESTFSSVVHGCAQTREWDTACRLLEEMREAGFKPNDSCYYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQAAQVVWDLLEEMRRRGVPRDEFACGAAMEAFGKAGRVSEALRLLKEMRWDGPEANLQCYNSAIEACCRVDDIDGGMSLLAELG 418
            Q+M CDE+TFS+++HGCAQTR+WD A RLLEEM  AG KPND+CYY                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        A++   LLE MR +GV  D+     A+ AFG+ GR  +AL L+  +R +G   NLQC+N AIEAC   DDIDGGMSLLAE+G
Sbjct: 1058 QSMPCDETTFSAMMHGCAQTRDWDAAGRLLEEMNAAGLKPNDACYYTLLVAACRAGELRLAEGLIKGMCKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGE-----AEIAEILLEMMRSQGVELDDVGRSHALVAFGRGGRPDKALALMDNIRENGSPPNLQCFNGAIEACALADDIDGGMSLLAEMG 1265
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2227.5920.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JAL8_9PHAE1.110e-2660.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 111..153
e-value: 1.5E-8
score: 34.7
coord: 176..223
e-value: 4.8E-9
score: 36.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 145..177
e-value: 1.7E-4
score: 19.5
coord: 74..107
e-value: 2.2E-4
score: 19.2
coord: 179..206
e-value: 6.7E-5
score: 20.8
coord: 283..316
e-value: 2.5E-9
score: 34.7
coord: 359..383
e-value: 4.1E-4
score: 18.3
coord: 111..143
e-value: 1.4E-7
score: 29.2
coord: 214..246
e-value: 1.2E-8
score: 32.6
coord: 40..73
e-value: 2.2E-5
score: 22.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 393..417
e-value: 0.18
score: 12.1
coord: 361..386
e-value: 3.4E-4
score: 20.6
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 25..83
e-value: 1.2E-6
score: 28.5
coord: 271..329
e-value: 5.2E-10
score: 39.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 426..460
score: 6.785
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 72..106
score: 10.293
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 37..71
score: 10.293
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 177..207
score: 8.966
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 107..141
score: 11.301
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 316..354
score: 7.509
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 390..425
score: 7.596
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 142..176
score: 10.271
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 355..389
score: 9.92
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 2..36
score: 8.55
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 246..280
score: 9.054
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 281..315
score: 13.789
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 211..245
score: 12.66
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 108..226
e-value: 2.4E-31
score: 110.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 341..463
e-value: 1.9E-23
score: 85.5
coord: 227..340
e-value: 3.9E-31
score: 110.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..103
e-value: 1.9E-24
score: 88.6
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 106..266
coord: 390..461
coord: 6..116
coord: 248..383

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2227contigH-paniculata_contig2227:912..4729 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2227.5920.1mRNA_H-paniculata_contig2227.5920.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2227 912..4729 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2227.5920.1 ID=prot_H-paniculata_contig2227.5920.1|Name=mRNA_H-paniculata_contig2227.5920.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=465bp
PPYFRFNSVINACAKAGDWALTLWLLSEIKAAGLKADIQSFNAALDACTK
GSNPEAAVALLGRMRAQGLAPDAISYQSAISACRRGGDSAAAVKLMKEME
GDGFCPGEAEYNLVIETVGREGDWDSAVDLLKQMKEDGIEPDVFSYGAAV
GACSKGRNPAMARALLQEMRELGHQPNKFCWNAVINVHARTGDTQGALAL
MKEMKQNMECDESTFSSVVHGCAQTREWDTACRLLEEMREAGFKPNDSCY
YALVSAACTAGELDLAQEFLSSMAEDGVPADSYAYSALLSGCGRAGEWER
ALRILREMKSGGVEPTLKVYTSVLRACAGAAEVGQAAQVVWDLLEEMRRR
GVPRDEFACGAAMEAFGKAGRVSEALRLLKEMRWDGPEANLQCYNSAIEA
CCRVDDIDGGMSLLAELGRATSLTPDAASFEPLVAACQRKEKQDVAQDLR
NAMARLGYSKDSTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf