prot_H-paniculata_contig22165.5875.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22165.5875.1
Unique Nameprot_H-paniculata_contig22165.5875.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length385
Homology
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BLAST of mRNA_H-paniculata_contig22165.5875.1 vs. uniprot
Match: A0A6H5KVB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVB6_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 1.900e-27
Identity = 118/403 (29.28%), Postives = 159/403 (39.45%), Query Frame = 0 
Query:    1 RRDAWVVATGHLLIRALDP---------------MGVSKDFRD-------KGEGL--GEGDCDR--------RYEQLLTNCLPPIWYNPDTTNPSTPPEGKILSPSALSGSGSVAAVTTVPTLAVMAGRVGASSAGAFNIAAAKTASTLRSRISQKIKPSGAKSPEIEVREEDNTDEVTRRMLPPASDIPASQPEKDKDAHLRGGASAEDHGPPVDLENRHNAEALHPPAAGTDLLTPLDWPALGRKYQPSNSINCEADTLNRTRREPKRRISCKLPCSPHDAAAMSARRTANDIAKDGRQKGVDMSRKLCAFCLERRSRGALCRFCRGRAVTAFKDRKGSRKARGILVSYGSIFGIKLLTALEEEAGAEKRWVRIYDDDTGCHFFYNVHFDSAVWEGNIQLP 371
            R  AW+VATGHLL+ ALDP                 +  D +D        GEG   G GD  +        +Y +LL NCL P W+  +  +  T     ++   A+ G         +P+L     R+  SS  A +     T S     I Q        SP + V +E + D   +    P S  P+ Q                    P+ L          P +AGT        P+     Q  NS    +   N            +LP +                        V+   K CA CL R S  A+CR C  RA  A KDR GSRKAR ILV YG  FG+    AL+ E  + KRWVR+ DD+TG  F++NVH+ S+VW+  I+LP
Sbjct:   21 RGAAWLVATGHLLLHALDPPPRGDAPAAGSDSSSSNLCNDGKDAGGRRAMSGEGRDGGRGDDGQXXXXXXXXQYRRLLDNCLEPSWH--EKKSEKTAATKTVIE--AVGGK-------EMPSLTAALTRLTNSSTSATSSMPDSTRSAKNKSIGQ------VSSPAVTVPQEGSPDNNLQAKPRPPSTPPSPQTMT-----------------PLSL----------PSSAGTGRRRRSRSPSRRSHRQGGNSTGTRSPAAN-----------TRLPATT----------------------AVEPGGKTCAVCLRRSSPAAMCRKCGRRAAKALKDRAGSRKARVILVPYGGHFGVGEADALQREGDSVKRWVRLLDDETGADFYHNVHYGSSVWKSGIELP 346
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22165.5875.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KVB6_9PHAE1.900e-2729.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22165contigH-paniculata_contig22165:664..2695 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22165.5875.1mRNA_H-paniculata_contig22165.5875.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22165 664..2697 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22165.5875.1 ID=prot_H-paniculata_contig22165.5875.1|Name=mRNA_H-paniculata_contig22165.5875.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=385bp
RRDAWVVATGHLLIRALDPMGVSKDFRDKGEGLGEGDCDRRYEQLLTNCL
PPIWYNPDTTNPSTPPEGKILSPSALSGSGSVAAVTTVPTLAVMAGRVGA
SSAGAFNIAAAKTASTLRSRISQKIKPSGAKSPEIEVREEDNTDEVTRRM
LPPASDIPASQPEKDKDAHLRGGASAEDHGPPVDLENRHNAEALHPPAAG
TDLLTPLDWPALGRKYQPSNSINCEADTLNRTRREPKRRISCKLPCSPHD
AAAMSARRTANDIAKDGRQKGVDMSRKLCAFCLERRSRGALCRFCRGRAV
TAFKDRKGSRKARGILVSYGSIFGIKLLTALEEEAGAEKRWVRIYDDDTG
CHFFYNVHFDSAVWEGNIQLPFQAASKGRSYRPRR
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