prot_H-paniculata_contig221.5848.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig221.5848.1
Unique Nameprot_H-paniculata_contig221.5848.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length239
Homology
BLAST of mRNA_H-paniculata_contig221.5848.1 vs. uniprot
Match: A0A6H5JQ60_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQ60_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 3.710e-27
Identity = 71/227 (31.28%), Postives = 116/227 (51.10%), Query Frame = 0
Query:    5 DLPRMGIINPENKSQIWELLLNFARGYPILGYNQGQGQACISISNAVGHNADATMAVFSKWAVPAFSLVMSTEGGDRCDRVKAIEYVWTCLGTSAPAVRAWLLNARYNAHLDLADNDIEDLAYILYSHIFSRAINSMCSMVGFNASIQAAIIDGTMQAGVHGPAVSMWAMSVVLCLMEKKAQHDETLLTWSIKNVKPFCQTINSFDVLEEAAPISLAEFVNGYRKAL 231
            D  R+G+ +    + + E+    A  +P++GYNQG   +C +I   VG N     AVF+KWAVP   ++M+     +     A+ Y W+ +   A  V  WL            D D E +A  + +HIF   +++ CS +G    +   I++ TM+AGVHGPAV+++ +  +LCL EK+   D  ++      +     ++ SF  + E AP+SL  F+ GYR A+
Sbjct:  213 DRSRLGVSDAV-AAAVKEICTKLAAVFPVIGYNQGFDASCKAIFICVGGNLGVAAAVFTKWAVPLAWMMMNPYRHGQLGINTAMRYTWSVIKMHAAPVSGWLCRDPIVG----CDEDNE-MADTILAHIFMEPLSTFCSRLGLPQCVINDIVEETMRAGVHGPAVTIFVVMSLLCLAEKQGAEDADVVVMVKVPLMAAASSVKSFQDILEHAPVSLEHFLTGYRAAM 433          
BLAST of mRNA_H-paniculata_contig221.5848.1 vs. uniprot
Match: A0A6H5K5C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5C0_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 1.780e-25
Identity = 70/227 (30.84%), Postives = 115/227 (50.66%), Query Frame = 0
Query:    5 DLPRMGIINPENKSQIWELLLNFARGYPILGYNQGQGQACISISNAVGHNADATMAVFSKWAVPAFSLVMSTEGGDRCDRVKAIEYVWTCLGTSAPAVRAWLLNARYNAHLDLADNDIEDLAYILYSHIFSRAINSMCSMVGFNASIQAAIIDGTMQAGVHGPAVSMWAMSVVLCLMEKKAQHDETLLTWSIKNVKPFCQTINSFDVLEEAAPISLAEFVNGYRKAL 231
            D  R+G+ +    + + E+    A  +P++GYNQG   +C +I   VG N     AVF+KWAVP   ++M+     +     A+ Y W+ +   A  V  WL            D D E +A  + +HIF   +++ CS +G    +   I++ TM+AGVHGPAV+++ +  +LCL EK+   D  ++      +     ++ SF  + E AP+SL  F+ G R A+
Sbjct:  218 DRSRLGVSDAV-AAAVKEICTKLAAVFPVIGYNQGFDASCKAIFICVGGNLGVAAAVFTKWAVPLAWMMMNPYRHGQLGINTAMRYTWSVIKMHAAPVSGWLCRDPIVG----CDEDNE-MADTILAHIFMEPLSTFCSRLGLPQCVINDIVEETMRAGVHGPAVTIFVVMSLLCLAEKQGAEDADVVVMVKVPLMAAASSVKSFQDILEHAPVSLEHFLTGCRAAM 438          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig221.5848.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JQ60_9PHAE3.710e-2731.28Uncharacterized protein n=3 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K5C0_9PHAE1.780e-2530.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig221contigH-paniculata_contig221:6140..11719 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig221.5848.1mRNA_H-paniculata_contig221.5848.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig221 5430..11726 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig221.5848.1 ID=prot_H-paniculata_contig221.5848.1|Name=mRNA_H-paniculata_contig221.5848.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=239bp
MITRDLPRMGIINPENKSQIWELLLNFARGYPILGYNQGQGQACISISNA
VGHNADATMAVFSKWAVPAFSLVMSTEGGDRCDRVKAIEYVWTCLGTSAP
AVRAWLLNARYNAHLDLADNDIEDLAYILYSHIFSRAINSMCSMVGFNAS
IQAAIIDGTMQAGVHGPAVSMWAMSVVLCLMEKKAQHDETLLTWSIKNVK
PFCQTINSFDVLEEAAPISLAEFVNGYRKALAQSGREL*
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