prot_H-paniculata_contig22001.5820.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22001.5820.1
Unique Nameprot_H-paniculata_contig22001.5820.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length100
Homology
BLAST of mRNA_H-paniculata_contig22001.5820.1 vs. uniprot
Match: A0A1J3H344_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3H344_NOCCA)

HSP 1 Score: 57.4 bits (137), Expect = 1.690e-7
Identity = 31/80 (38.75%), Postives = 49/80 (61.25%), Query Frame = 0
Query:   21 NMWVADSGASNHMMKNLAKMYDIRKPVTGEDVVMLGDGSIMTVEHVGKLDLICHSTTDVPATLE-VSYLPELNFNLLSLH 99
            N W+ DSGA++HM  +L  +    +P TG D V++GDGS +++ H G L L  HS    P +L+ V  +P +  NL+S++
Sbjct:   48 NAWLMDSGATHHMTSDLHHL-STNQPYTGNDAVLIGDGSGLSITHTGSLSLPSHSR---PLSLKSVLCVPNIKKNLISVY 123          
BLAST of mRNA_H-paniculata_contig22001.5820.1 vs. uniprot
Match: UPI00053978D8 (uncharacterized protein LOC104727812 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI00053978D8)

HSP 1 Score: 57.4 bits (137), Expect = 1.860e-7
Identity = 31/80 (38.75%), Postives = 49/80 (61.25%), Query Frame = 0
Query:   21 NMWVADSGASNHMMKNLAKMYDIRKPVTGEDVVMLGDGSIMTVEHVGKLDLICHSTTDVPATL-EVSYLPELNFNLLSLH 99
            N W+ DSGA++HM  NL  +    +P  G+D V++GDGS +++ H G L L  +S    P +L  V  +P ++ NLLS++
Sbjct:  322 NPWILDSGATHHMTSNLGNLAS-HQPYQGDDAVLIGDGSGLSISHTGSLSLPSNSK---PLSLTNVLCVPHIHKNLLSVY 397          
BLAST of mRNA_H-paniculata_contig22001.5820.1 vs. uniprot
Match: A0A5E4G702_PRUDU (PREDICTED: Retrovirus-related Pol poly from (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5E4G702_PRUDU)

HSP 1 Score: 56.2 bits (134), Expect = 5.040e-7
Identity = 28/79 (35.44%), Postives = 47/79 (59.49%), Query Frame = 0
Query:   21 NMWVADSGASNHMMKNLAKMYDIRKPVTGEDVVMLGDGSIMTVEHVGKLDLICHSTTDVPATLEVSYLPELNFNLLSLH 99
            N+W+ADSGASNH+  N++ +     P TG + + +GDG+ + + H      I H++      L V ++P++  NLLS+H
Sbjct:  116 NLWLADSGASNHVTSNMSNLGH-SSPYTGSETLRVGDGNSLPISHTRST--ILHTSNAKFHLLNVLHVPQVAHNLLSVH 191          
BLAST of mRNA_H-paniculata_contig22001.5820.1 vs. uniprot
Match: A0A5E4GCQ9_PRUDU (PREDICTED: poly n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5E4GCQ9_PRUDU)

HSP 1 Score: 55.1 bits (131), Expect = 8.060e-7
Identity = 28/79 (35.44%), Postives = 47/79 (59.49%), Query Frame = 0
Query:   21 NMWVADSGASNHMMKNLAKMYDIRKPVTGEDVVMLGDGSIMTVEHVGKLDLICHSTTDVPATLEVSYLPELNFNLLSLH 99
            N+W+ADSGASNH+  N++ +     P TG + + +GDG+ + + + G    I H++      L V + P++  NLLS+H
Sbjct:   23 NIWLADSGASNHVTLNMSNLCH-SSPYTGSETLRVGDGNSLPISNTGST--ILHTSNAKFHLLNVLHTPQVAHNLLSVH 98          
BLAST of mRNA_H-paniculata_contig22001.5820.1 vs. uniprot
Match: A0A4Y1RWS6_PRUDU (Uncharacterized protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RWS6_PRUDU)

HSP 1 Score: 55.5 bits (132), Expect = 9.650e-7
Identity = 27/78 (34.62%), Postives = 52/78 (66.67%), Query Frame = 0
Query:   23 WVADSGASNHMMKNLAKMYDIRKPVTGEDVVMLGDGSIMTVEHVGKLDLICHSTT-DVPATLEVSYLPELNFNLLSLH 99
            W+ADSGAS+HM+ +++ +  +  P    + V++G+G  + ++H+G   + C ST+  +P+   V ++P+L+ NLLS+H
Sbjct:  440 WIADSGASHHMVSDISSLTHVA-PCESTEQVIVGNGEGLKIKHIGTTAIACDSTSLRMPS---VFHVPQLSANLLSVH 513          
BLAST of mRNA_H-paniculata_contig22001.5820.1 vs. uniprot
Match: A0A4Y1QYH0_PRUDU (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QYH0_PRUDU)

HSP 1 Score: 55.1 bits (131), Expect = 1.310e-6
Identity = 27/78 (34.62%), Postives = 52/78 (66.67%), Query Frame = 0
Query:   23 WVADSGASNHMMKNLAKMYDIRKPVTGEDVVMLGDGSIMTVEHVGKLDLICHSTT-DVPATLEVSYLPELNFNLLSLH 99
            W+ADSGAS+HM+ +++ +  +  P    + V++G+G  + ++H+G   + C ST+  +P+   V ++P+L+ NLLS+H
Sbjct:  165 WIADSGASHHMVSDISSLTHVA-PCESTEQVIVGNGEGLKIKHIGTTAIACASTSLRMPS---VFHVPQLSANLLSVH 238          
BLAST of mRNA_H-paniculata_contig22001.5820.1 vs. uniprot
Match: A0A4Y1RLH4_PRUDU (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RLH4_PRUDU)

HSP 1 Score: 54.7 bits (130), Expect = 1.780e-6
Identity = 28/78 (35.90%), Postives = 48/78 (61.54%), Query Frame = 0
Query:   22 MWVADSGASNHMMKNLAKMYDIRKPVTGEDVVMLGDGSIMTVEHVGKLDLICHSTTDVPATLEVSYLPELNFNLLSLH 99
            +W+ADSGAS+HM+ ++  M D   P T  D V +G+G  + ++H+G   +   +TT   +   V ++P+L  NLLS++
Sbjct:  109 VWIADSGASHHMVPHMTTM-DSASPCTSFDQVRVGNGEGLRIDHIGSSHI--PTTTSSLSLSSVFHIPQLTANLLSVY 183          
BLAST of mRNA_H-paniculata_contig22001.5820.1 vs. uniprot
Match: UPI001C7A084A (Uncharacterized protein n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C7A084A)

HSP 1 Score: 53.5 bits (127), Expect = 2.910e-6
Identity = 30/76 (39.47%), Postives = 45/76 (59.21%), Query Frame = 0
Query:   23 WVADSGASNHMMKNLAKMYDIRKPVTGEDVVMLGDGSIMTVEHVGKLDLICHSTTDVPATLEVSYLPELNFNLLSL 98
            W AD+GAS HM  N   + ++R+ + G D V++GDGS+ T+ H+G  D I  S        +V  +P+L  NLLS+
Sbjct:  121 WTADTGASAHMTGNSGMLSNLRQYL-GHDAVLIGDGSLHTITHIG--DTIIQSGHSFIKLKDVLLVPDLAKNLLSI 193          
BLAST of mRNA_H-paniculata_contig22001.5820.1 vs. uniprot
Match: A0A4Y1RCX8_PRUDU (Uncharacterized protein (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RCX8_PRUDU)

HSP 1 Score: 53.5 bits (127), Expect = 4.590e-6
Identity = 29/80 (36.25%), Postives = 52/80 (65.00%), Query Frame = 0
Query:   22 MWVADSGASNHMMKNLAKMYDIRKPVTGEDVVMLGDGSIMTVEHVGKLDLICHSTTDV--PATLEVSYLPELNFNLLSLH 99
            +W+ADSGAS+HM+ N +++ D   P   ++ V +G+G+ +T++++G   + C  +T +  P+ L V   P+L  NLLS+H
Sbjct:  376 VWIADSGASHHMVGNSSQL-DHVTPCNVDENVTVGNGAGLTIQNLGTATISCAQSTSLHLPSVLHV---PKLRANLLSVH 451          
BLAST of mRNA_H-paniculata_contig22001.5820.1 vs. uniprot
Match: A0A4Y1QZM5_PRUDU (Integrase catalytic domain-containing protein n=2 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QZM5_PRUDU)

HSP 1 Score: 53.1 bits (126), Expect = 6.280e-6
Identity = 28/79 (35.44%), Postives = 51/79 (64.56%), Query Frame = 0
Query:   22 MWVADSGASNHMMKNLAKMYDIRKPVTGEDVVMLGDGSIMTVEHVGKLDLICHSTTDVPATL-EVSYLPELNFNLLSLH 99
            +W+ADSGAS+HM+ ++  M+++  P T  + V++G+G  + + H+GK  +    T     TL +V ++P+L  NLLS++
Sbjct:  376 VWIADSGASHHMVPHMTTMHNVT-PCTSAENVVVGNGEGLHIAHIGKSHI---PTVSSSLTLSKVLHVPQLTANLLSVY 450          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22001.5820.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1J3H344_NOCCA1.690e-738.75Retrovirus-related Pol polyprotein from transposon... [more]
UPI00053978D81.860e-738.75uncharacterized protein LOC104727812 n=1 Tax=Camel... [more]
A0A5E4G702_PRUDU5.040e-735.44PREDICTED: Retrovirus-related Pol poly from (Fragm... [more]
A0A5E4GCQ9_PRUDU8.060e-735.44PREDICTED: poly n=1 Tax=Prunus dulcis TaxID=3755 R... [more]
A0A4Y1RWS6_PRUDU9.650e-734.62Uncharacterized protein n=1 Tax=Prunus dulcis TaxI... [more]
A0A4Y1QYH0_PRUDU1.310e-634.62Integrase catalytic domain-containing protein (Fra... [more]
A0A4Y1RLH4_PRUDU1.780e-635.90Integrase catalytic domain-containing protein (Fra... [more]
UPI001C7A084A2.910e-639.47Uncharacterized protein n=1 Tax=Carya illinoinensi... [more]
A0A4Y1RCX8_PRUDU4.590e-636.25Uncharacterized protein (Fragment) n=1 Tax=Prunus ... [more]
A0A4Y1QZM5_PRUDU6.280e-635.44Integrase catalytic domain-containing protein n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22001contigH-paniculata_contig22001:3964..4263 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22001.5820.1mRNA_H-paniculata_contig22001.5820.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22001 3964..4263 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22001.5820.1 ID=prot_H-paniculata_contig22001.5820.1|Name=mRNA_H-paniculata_contig22001.5820.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=100bp
DLPVAFTNQNSVRNDAINNGNMWVADSGASNHMMKNLAKMYDIRKPVTGE
DVVMLGDGSIMTVEHVGKLDLICHSTTDVPATLEVSYLPELNFNLLSLH*
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