prot_H-paniculata_contig2197.5805.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2197.5805.1
Unique Nameprot_H-paniculata_contig2197.5805.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length293
Homology
BLAST of mRNA_H-paniculata_contig2197.5805.1 vs. uniprot
Match: D8LTH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTH2_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 9.510e-74
Identity = 127/212 (59.91%), Postives = 154/212 (72.64%), Query Frame = 0
Query:   80 YEELLASRPLATKAITSGIIAGAGDLTCQVLAAHFAVDYLSVESDEVRGVEQEDEELGNHSQMP--AAWVLAAEIDWGRYARFTLLGAAFIAPCLHYWYGFLGRAIPGKALSTVVKRVAVDQLVFSPVFLMSFLSTIMLVDGQAAKIVPKLQADYVQTLVGNWGYWIPAQLINFRFVPSMYQVLCSNGFGFVWNIYLSYQSNKAVTTVKDGE 289
            Y  LL SRPLATKA+TSG IA AGD++CQ+LA   A      + +E +   Q+ +EL +H       A  +A+EIDWGR  RFT +GAA +AP LH WYGFL + +PG A +TVVKRVA+DQL+F+P FL  FLST+ML+DG AAKI  KL+ADY  TLV NWGYWIPAQ+INFRFV  +YQVL +N  GF WNIYLSYQSNKAV  +KD E
Sbjct:    2 YNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVA------KREEEKSSAQDVDELEHHEPFGDGGARSVASEIDWGRTLRFTFVGAAVVAPALHAWYGFLIQRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYTTTLVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAV--LKDME 205          
BLAST of mRNA_H-paniculata_contig2197.5805.1 vs. uniprot
Match: A0A6H5JL95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL95_9PHAE)

HSP 1 Score: 234 bits (598), Expect = 6.520e-73
Identity = 133/235 (56.60%), Postives = 159/235 (67.66%), Query Frame = 0
Query:   55 VPPQQPRPRKPSTTKNSESLGLLGRYEELLASRPLATKAITSGIIAGAGDLTCQVLAAHFAVDYLSVESDEVRGVEQEDEELGNHSQMPAAWVLAAEIDWGRYARFTLLGAAFIAPCLHYWYGFLGRAIPGKALSTVVKRVAVDQLVFSPVFLMSFLSTIMLVDGQAAKIVPKLQADYVQTLVGNWGYWIPAQLINFRFVPSMYQVLCSNGFGFVWNIYLSYQSNKAVTTVKDGE 289
            VP Q P    P  TK + +  +   Y  LL SRPLATKA+TSG IA AGD++CQ+LA   A      E +       +D E         A  +A+EIDWGR  RFT +GAA +AP LH WYGFL R +PG A +TVVKRVA+DQL+F+PVFL  FLST+ML+DG AAKI  KL+ADY  T+V NWGYWIPAQ+INFRFV  +YQVL +N  GF WNIYLSYQSNKAV  +KD E
Sbjct:   49 VPAQPPPTGAPKPTKPTRA-SIFSMYNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVA----KREEEHSSAQHVDDHEQHEPFGDGGATSVASEIDWGRTLRFTFVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPVFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAV--LKDME 276          
BLAST of mRNA_H-paniculata_contig2197.5805.1 vs. uniprot
Match: A0A835YNC4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNC4_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.640e-51
Identity = 100/227 (44.05%), Postives = 131/227 (57.71%), Query Frame = 0
Query:   71 SESLGLLGRYEELLASRPLATKAITSGIIAGAGDLTCQV-----LAAHFAVDYLSVESDEVRGVEQEDEELGNHSQMPAAWVLAAEIDWGRYARFTLLGAAFIAPCLHYWYGFLGRAIPGKALSTVVKRVAVDQLVFSPVFLMSFLSTIMLVDGQAAKIVPKLQADYVQTLVGNWGYWIPAQLINFRFVPSMYQVLCSNGFGFVWNIYLSYQSNKAVTTVKDGETKP 292
            S S+ ++  Y  LL + P+ATKA+TS  IAG GD+ CQ+     LAA  A    + E+    G        G+ SQ          +DW R ARF LL  A  AP  H WYG LGR +PG+ L    KR+A+DQ VFSPVF+  F S +M+++G+AA+I  KL+ DY  TLV NW  W+PAQL NFR VP  YQV  +N  G  WN YLS+QS K + +    + +P
Sbjct:   42 SRSINIIQSYSRLLETNPIATKALTSAAIAGMGDIGCQIYTNRGLAAAAAG---AGEAGSNAGAADGAATWGSTSQQ-------RHLDWTRCARFMLLSGALFAPAAHAWYGLLGRLLPGQTLMVATKRMALDQFVFSPVFVGVFFSALMVLEGEAARIPDKLRQDYWTTLVSNWTLWMPAQLANFRLVPLQYQVGAANCVGLFWNAYLSFQSFKKIKSAPQSQPEP 258          
BLAST of mRNA_H-paniculata_contig2197.5805.1 vs. uniprot
Match: A0A835YKC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC9_9STRA)

HSP 1 Score: 173 bits (438), Expect = 2.190e-48
Identity = 104/238 (43.70%), Postives = 134/238 (56.30%), Query Frame = 0
Query:   70 NSESLGLLGRYEELLASRPLATKAITSGIIAGAGDLTCQVLAAHFAVDYLSVESDEVR--------GVEQ------EDEELGNHSQMPAAWVLAAEIDWGRYARFTLLGAAFIAPCLHYWYGFLGRAIPGK-ALSTVVKRVAVDQLVFSPVFLMSFLSTIMLVDGQAAKIVPKLQADYVQTLVGNWGYWIPAQLINFRFVPSMYQVLCSNGFGFVWNIYLSYQSNKAVTTVKDGETKP 292
            +S S  LL RY  LLASRPL TK +T+ IIAG GD+ CQ+  AH A +  +   ++V         GV         +  +    Q    W     +D  R  +F LL AA  AP  HYWY  L + + G  A+   VKR+A+DQ +F+PVF+  F S +M+V+G+AAKI  KL+ DY  TLV NWG W+PAQLINFR VP  YQVL +NG GF WN  +S Q  K      D E +P
Sbjct:   18 SSSSRSLLDRYSALLASRPLLTKGVTAAIIAGMGDVACQLYTAHRAWEEEAQGENDVPPHHPHIHGGVASVSAPAAAEAGMAKRQQHRDWW---GAVDLKRTGKFMLLNAALFAPSAHYWYQVLAKYVKGPTAMGAAVKRMALDQFLFAPVFMGLFFSALMVVEGEAAKIPQKLKQDYWPTLVKNWGIWMPAQLINFRLVPQPYQVLWANGVGFFWNAIMSAQCFKETL---DDEEQP 249          
BLAST of mRNA_H-paniculata_contig2197.5805.1 vs. uniprot
Match: A0A484DWD7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DWD7_BRELC)

HSP 1 Score: 159 bits (401), Expect = 4.710e-44
Identity = 86/212 (40.57%), Postives = 114/212 (53.77%), Query Frame = 0
Query:   80 YEELLASRPLATKAITSGIIAGAGDLTCQVLAAHFAVDYLSVESDEVRGVEQEDEELGNHSQMPAAWVLAAEIDWGRYARFTLLGAAFIAPCLHYWYGFLGRAIPGKALSTVVKRVAVDQLVFSPVFLMSFLSTIMLVDGQAAKIVPKLQADYVQTLVGNWGYWIPAQLINFRFVPSMYQVLCSNGFGFVWNIYLSYQSNKAVTTVKDGETK 291
            Y  LL + PL+TK +T G IAG GD+ CQVL      D                                A+ D  R A FT LG   ++P LH WYGFLG  +PG + +T+ KR+ +DQ++F+PVFL  FLS++  ++G A  I  KL+AD+      NW  W+PAQ+INFRFVP+  QVL SN  G VWN YLS+ S+  +      E K
Sbjct:   45 YASLLVTHPLSTKIVTGGTIAGLGDIGCQVLLEGERKD--------------------------------AKFDLKRTAIFTFLGGVAVSPILHVWYGFLGSRLPGISKATITKRLVLDQIIFAPVFLSIFLSSVQALEGHADDIQDKLRADWWPLTKANWVIWVPAQIINFRFVPATMQVLFSNVMGLVWNSYLSFVSHSEIPKTLFSEDK 224          
BLAST of mRNA_H-paniculata_contig2197.5805.1 vs. uniprot
Match: A0A225WCL6_9STRA (Protein Mpv17 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WCL6_9STRA)

HSP 1 Score: 157 bits (398), Expect = 5.030e-44
Identity = 89/217 (41.01%), Postives = 119/217 (54.84%), Query Frame = 0
Query:   66 STTKNSESLGLLGRYEELLASRPLATKAITSGIIAGAGDLTCQVLAAHFAVDYLSVESDEVRGVEQEDEELGNHSQMPAAWVLAAEIDWGRYARFTLLGAAFIAPCLHYWYGFLGRAIPGKALSTVVKRVAVDQLVFSPVFLMSFLSTIMLVDGQAAKIVPKLQADYVQTLVGNWGYWIPAQLINFRFVPSMYQVLCSNGFGFVWNIYLSYQSNKAV 282
            S+TK + +  +   Y  LL + PL+TK  T G IAG GD+ CQ+L          +E D+                           D  R A FT+LG   I+P LH WYGFLG  + G A S V+KR+A+DQL F+P+FL  FLS+++ ++G A  I  KL+ D+      NWG W+PAQ++NFRFVP   QVL SN  G +WN YLSY S+  V
Sbjct:    4 SSTKPTTARRVWDSYASLLGTHPLSTKIATGGAIAGLGDVGCQLL----------LEGDK-------------------------RFDGKRTAIFTILGGFLISPVLHVWYGFLGSRVSGVATSAVMKRLALDQLGFAPIFLPVFLSSVLTLEGHAYDIPDKLRVDWWSVTKANWGVWVPAQILNFRFVPGPMQVLFSNVVGLLWNAYLSYVSHSTV 185          
BLAST of mRNA_H-paniculata_contig2197.5805.1 vs. uniprot
Match: A0A662Y1B5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y1B5_9STRA)

HSP 1 Score: 159 bits (401), Expect = 5.440e-44
Identity = 89/215 (41.40%), Postives = 120/215 (55.81%), Query Frame = 0
Query:   66 STTKNSESLGLLGR----YEELLASRPLATKAITSGIIAGAGDLTCQVLAAHFAVDYLSVESDEVRGVEQEDEELGNHSQMPAAWVLAAEIDWGRYARFTLLGAAFIAPCLHYWYGFLGRAIPGKALSTVVKRVAVDQLVFSPVFLMSFLSTIMLVDGQAAKIVPKLQADYVQTLVGNWGYWIPAQLINFRFVPSMYQVLCSNGFGFVWNIYLSY 276
            S +  S S G + R    Y  LL + PL+TK +T G IAGAGD++CQ          L +E+D+                         + D  R A FT LG A I+P LH WYGFLG+ +PG +   +VKR+A+DQLVF+P FL  F S+++ ++G   ++  KL+AD+      NW  W+PAQ+INFRFVP   QVL +N  G VWN YLSY
Sbjct:   24 SFSSTSSSKGFVRRSWESYATLLETHPLSTKIVTGGAIAGAGDVSCQ----------LFIEADD-----------------------NGKFDVKRAAIFTFLGGALISPVLHVWYGFLGKLVPGVSSRAIVKRLALDQLVFAPTFLCVFFSSLLTLEGHLDQLPEKLRADWWPATKANWAVWVPAQIINFRFVPGSLQVLFANVVGLVWNSYLSY 205          
BLAST of mRNA_H-paniculata_contig2197.5805.1 vs. uniprot
Match: D0MT87_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MT87_PHYIT)

HSP 1 Score: 155 bits (393), Expect = 7.810e-43
Identity = 91/227 (40.09%), Postives = 122/227 (53.74%), Query Frame = 0
Query:   66 STTKNSESLG---LLGRYEELLASRPLATKAITSGIIAGAGDLTCQVLAAHFAVDYLSVESDEVRGVEQEDEELGNHSQMPAAWVLAAEIDWGRYARFTLLGAAFIAPCLHYWYGFLGRAIPGKALSTVVKRVAVDQLVFSPVFLMSFLSTIMLVDGQAAKIVPKLQADYVQTLVGNWGYWIPAQLINFRFVPSMYQVLCSNGFGFVWNIYLSYQSNKAVTTVKDGE 289
            ST+  SES G   +   Y  LL + PL TK +T G IAG GD+ CQ++                  +E ED +              A++D  R   FT LG   I+P LH WYGFLG  +PG + S V KR+A+DQL F+P FL   LS+++ ++G A  I  KL+AD+   +  NW  W+PAQ++NFRFVP   QV+ SN  G +WN YLSY S+  V      E
Sbjct:   28 STSSTSESSGFRRIWDTYASLLETHPLKTKIVTGGAIAGLGDVGCQLV------------------LEGEDGD--------------AKLDVKRTVIFTFLGGLLISPVLHVWYGFLGSRLPGVSTSAVAKRLALDQLGFAPTFLPIILSSVLTLEGHAEDIPDKLRADWWPLMKANWVVWVPAQILNFRFVPGSMQVIFSNVVGLLWNSYLSYVSHSQVPKALPAE 222          
BLAST of mRNA_H-paniculata_contig2197.5805.1 vs. uniprot
Match: A0A6A3NKH9_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NKH9_9STRA)

HSP 1 Score: 155 bits (392), Expect = 8.760e-43
Identity = 87/213 (40.85%), Postives = 117/213 (54.93%), Query Frame = 0
Query:   80 YEELLASRPLATKAITSGIIAGAGDLTCQVLAAHFAVDYLSVESDEVRGVEQEDEELGNHSQMPAAWVLAAEIDWGRYARFTLLGAAFIAPCLHYWYGFLGRAIPGKALSTVVKRVAVDQLVFSPVFLMSFLSTIMLVDGQAAKIVPKLQADYVQTLVGNWGYWIPAQLINFRFVPSMYQVLCSNGFGFVWNIYLSYQSNKAVTT---VKDGE 289
            Y  LL + PL+TK  T G IAG GD+ CQ++                       EE   H  +         +D  R A FT LG   I+P LH WYGFLG  +PG + + V KR+A+DQL F+P FL  FLS+++ ++G   +I  KL+AD+      NWG W+PAQ++NFRFVP   QVL SN  G +WN YLSY S+  V     ++DG+
Sbjct:   40 YTSLLETHPLSTKIATGGAIAGLGDMGCQLVL----------------------EEKEKHKPL---------LDVKRAAIFTFLGGFLISPVLHVWYGFLGSRLPGVSAAAVAKRLALDQLGFAPTFLPVFLSSVLTLEGNKEQIPDKLRADWWTVTKANWGVWVPAQILNFRFVPGPMQVLFSNVVGLLWNAYLSYVSHADVPAKGLLEDGD 221          
BLAST of mRNA_H-paniculata_contig2197.5805.1 vs. uniprot
Match: A0A4Q2YFM0_9BACT (Mpv17/PMP22 family protein n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q2YFM0_9BACT)

HSP 1 Score: 155 bits (391), Expect = 1.170e-42
Identity = 92/230 (40.00%), Postives = 125/230 (54.35%), Query Frame = 0
Query:   63 RKPSTTKNSESLGLLGRYEELLASRPLATKAITSGIIAGAGDLTCQVLAAHFAVDYLSVESDEVRGVEQEDEELGNHSQMPAAWVLAAEIDWGRYARFTLLGAAFIAPCLHYWYGFLGRAIPGKALSTVVKRVAVDQLVFSPVFLMSFLSTIMLVDGQAAKIVPKLQADYVQTLVGNWGYWIPAQLINFRFVPSMYQVLCSNGFGFVWNIYLSYQS-NKAVTTVKDGETK 291
            R+P +++   S  L  +Y +LL + PL TK IT+G IA   D+TCQV          S  SDE                  A   L   +DW R   FT++      P  HYWYGFL   I G      +KRV +DQ++F+PV L SF S ++LV+G++ +I  KL+ D   T++ N+  WIPAQLINF+FVP  Y+VL +N  GF WNIYLSY + N   ++  D E K
Sbjct:   19 RRPFSSRPDTS-SLWQQYNKLLETHPLMTKCITAGAIAAVADVTCQV----------SFPSDE-----------------DANKSLLERMDWKRTRNFTIVNTFLFPPLAHYWYGFLSVKIVGTTFMAAIKRVVLDQMLFAPVLLASFFSAVLLVNGESDRIPDKLRNDLPTTILTNYTVWIPAQLINFQFVPIPYRVLWANAVGFFWNIYLSYAAVNGTSSSAGDTEKK 220          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2197.5805.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTH2_ECTSI9.510e-7459.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JL95_9PHAE6.520e-7356.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YNC4_9STRA1.640e-5144.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YKC9_9STRA2.190e-4843.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A484DWD7_BRELC4.710e-4440.57Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A225WCL6_9STRA5.030e-4441.01Protein Mpv17 n=1 Tax=Phytophthora megakarya TaxID... [more]
A0A662Y1B5_9STRA5.440e-4441.40Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
D0MT87_PHYIT7.810e-4340.09Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
A0A6A3NKH9_9STRA8.760e-4340.85Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A4Q2YFM0_9BACT1.170e-4240.00Mpv17/PMP22 family protein n=1 Tax=Verrucomicrobia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 220..275
e-value: 2.9E-21
score: 75.4
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 73..282
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 73..282
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 196..217
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 157..176
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 218..292
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 177..195
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..156
NoneNo IPR availableTMHMMTMhelixcoord: 157..179
NoneNo IPR availableTMHMMTMhelixcoord: 257..274
NoneNo IPR availableTMHMMTMhelixcoord: 200..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2197contigH-paniculata_contig2197:12133..15685 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2197.5805.1mRNA_H-paniculata_contig2197.5805.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2197 11549..15739 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2197.5805.1 ID=prot_H-paniculata_contig2197.5805.1|Name=mRNA_H-paniculata_contig2197.5805.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=293bp
MSELTVLAVGMRRAVALSSPQIAISRLGQPLLRTTKTKIPTPARPRQCSS
DQQQVPPQQPRPRKPSTTKNSESLGLLGRYEELLASRPLATKAITSGIIA
GAGDLTCQVLAAHFAVDYLSVESDEVRGVEQEDEELGNHSQMPAAWVLAA
EIDWGRYARFTLLGAAFIAPCLHYWYGFLGRAIPGKALSTVVKRVAVDQL
VFSPVFLMSFLSTIMLVDGQAAKIVPKLQADYVQTLVGNWGYWIPAQLIN
FRFVPSMYQVLCSNGFGFVWNIYLSYQSNKAVTTVKDGETKP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22