prot_H-paniculata_contig2175.5749.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2175.5749.1
Unique Nameprot_H-paniculata_contig2175.5749.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length324
Homology
BLAST of mRNA_H-paniculata_contig2175.5749.1 vs. uniprot
Match: D7G2K9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2K9_ECTSI)

HSP 1 Score: 212 bits (539), Expect = 2.920e-63
Identity = 153/279 (54.84%), Postives = 169/279 (60.57%), Query Frame = 0
Query:    1 MGRVRRYKKVKAIDPFSK----------RKTAKVNDKDRNLPPDVKNHQAQRLNNLQEN-GKSKKAKRRLPQWAHEELMETAKRVREEHDDSEGKNRRQPEPQRPTIEGKREDESMREFNKRVKQGTAQLLRDQFLEHSTTNKRRKQYLDDKKRKNKLKKQGLWEGVKRREHLDKEGAEEEEIFGTTXXXXXXXXQGGAKGRGMAR----------------------GRADDEEGVS-FADSERIKFGEVAHAPPDLAKIPKPKGFKDQGQAKPWARQ 245
            MGRVR+YKKVKA+DPF+K          RK    +D DRNLPPDVKNHQAQRLNNL+E   K KK KRRLPQWAHEEL ETAKRVREEH D  GK R QPEPQR  +EGKREDESMR+FNKRV++GTAQLL+D+F EHS+TNK                   LW                       XXXXXXXX                                 GRADD+EG +     ERI+FGEVAHAPPDLAKIPKP+GFKDQGQAKPWARQ
Sbjct:    1 MGRVRKYKKVKAMDPFAKGGCGGRMGMGRKGG--SDLDRNLPPDVKNHQAQRLNNLEEGKDKKKKNKRRLPQWAHEELKETAKRVREEHADPGGKGR-QPEPQRAAMEGKREDESMRQFNKRVREGTAQLLKDEFKEHSSTNKXXXXXXXXXXXXXXXXXXXLWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGVLGRADDDEGAAQLLQKERIRFGEVAHAPPDLAKIPKPRGFKDQGQAKPWARQ 276          
BLAST of mRNA_H-paniculata_contig2175.5749.1 vs. uniprot
Match: A0A835YUV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUV8_9STRA)

HSP 1 Score: 144 bits (362), Expect = 2.890e-37
Identity = 120/327 (36.70%), Postives = 157/327 (48.01%), Query Frame = 0
Query:    1 MGRVRRYKKVKAIDPFSKRKTAKVNDKDRNLPPDVKNHQAQRLNNLQENGKSKKAKRRLPQWAHEELMETAKRVREEHDDSEGKNRRQPEP-----QRPTIEGKREDESMREFNKRVKQGTAQLLRDQFLEHSTTNKRRKQYLDDKKRKNKLKKQGLWEGVKRREHLDKEGAEEEEIFGTTXXXXXXXXQGGAKGRGMARGRADDEEGVSFADSERIKFGEVAHAPPDLAKIPKPKGFKDQGQAKPWARQQQHKHXXXXXXXXXXXXXXXXXXXXMPGRNVRGGEAAGEAAKAQKRQMEEMRQRVLEAYSSMKKRRRAGQTQFVGSD 322
            MGRVRRYKK K +D  SKRK A   D + NLPPD  NHQAQRL    +    ++AK+RLP+WA EEL ETAKR RE            P P      +  I  KR DES+REFN+RV++  A+ L+D     S+T  RRK++L +K +K KL++QGLWE  K +   +++G  EE                                   F+  E I+FGE  H PP    +PK KG K     KPW R                         X        G  + E A+ + +Q+E +R   + AY+ +KKRRRAGQ Q V  D
Sbjct:    1 MGRVRRYKKAKNLDITSKRKRADKKDVEHNLPPDTANHQAQRLK--ADGTLKRRAKQRLPEWAKEELRETAKREREADKQLLAGAAATPLPGENDTPKVKITPKRTDESLREFNERVRKVAAEALKDNAKRASSTVARRKKHLAEKSQKKKLQRQGLWEEHKMQVAREEQGIAEER---------------------------------DFSKPEHIQFGETVHEPPRFQSMPKLKGLKPDLAEKPWLR---------GLRSDAITGLKRKAGGXXXXXXXXXGVLSAEGAQLKAQQLERVRTEAVAAYADLKKRRRAGQVQHVAHD 283          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2175.5749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2K9_ECTSI2.920e-6354.84Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUV8_9STRA2.890e-3736.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..84
IPR026680Coiled-coil domain-containing protein 137PANTHERPTHR21838UNCHARACTERIZEDcoord: 2..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2175contigH-paniculata_contig2175:7179..11177 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2175.5749.1mRNA_H-paniculata_contig2175.5749.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2175 6828..11656 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2175.5749.1 ID=prot_H-paniculata_contig2175.5749.1|Name=mRNA_H-paniculata_contig2175.5749.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=324bp
MGRVRRYKKVKAIDPFSKRKTAKVNDKDRNLPPDVKNHQAQRLNNLQENG
KSKKAKRRLPQWAHEELMETAKRVREEHDDSEGKNRRQPEPQRPTIEGKR
EDESMREFNKRVKQGTAQLLRDQFLEHSTTNKRRKQYLDDKKRKNKLKKQ
GLWEGVKRREHLDKEGAEEEEIFGTTSGGGGGGGQGGAKGRGMARGRADD
EEGVSFADSERIKFGEVAHAPPDLAKIPKPKGFKDQGQAKPWARQQQHKH
NRNADKKSKGEDDGGGGGGGMPGRNVRGGEAAGEAAKAQKRQMEEMRQRV
LEAYSSMKKRRRAGQTQFVGSDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026680CCDC137