prot_H-paniculata_contig2149.5661.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2149.5661.1
Unique Nameprot_H-paniculata_contig2149.5661.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length763
Homology
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BLAST of mRNA_H-paniculata_contig2149.5661.1 vs. uniprot
Match: A0A6H5LBM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBM3_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 3.330e-5
Identity = 22/34 (64.71%), Postives = 25/34 (73.53%), Query Frame = 0 
Query:    6 RKCLHEGCFKQPSYGLAGTRMAEFCARHAKYGMV 39
            R+C HE C K P+YG+ GTR AEFCA HA  GMV
Sbjct:   15 RRCAHEDCVKHPTYGVPGTRKAEFCAPHALDGMV 48
[Close]
BLAST of mRNA_H-paniculata_contig2149.5661.1 vs. uniprot
Match: D7FIE1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE1_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 5.130e-5
Identity = 26/43 (60.47%), Postives = 32/43 (74.42%), Query Frame = 0 
Query:    4 QWRKCLHE-GCFKQPSYGLAGTRMAEFCARHAKYGMVDVVSKR 45
            QWR C  E GC K PSYG AG++  EFCA+HAK GMV++ S+R
Sbjct:  104 QWRPCCKEHGCTKWPSYGGAGSKKVEFCAQHAKKGMVNLRSRR 146
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2149.5661.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LBM3_9PHAE3.330e-564.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIE1_ECTSI5.130e-560.47EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2149contigH-paniculata_contig2149:6661..9405 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2149.5661.1mRNA_H-paniculata_contig2149.5661.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2149 5772..20513 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2149.5661.1 ID=prot_H-paniculata_contig2149.5661.1|Name=mRNA_H-paniculata_contig2149.5661.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=763bp
MSGQWRKCLHEGCFKQPSYGLAGTRMAEFCARHAKYGMVDVVSKRCSHEG
CSKQPSYGLRSTRKAEFCARHAADKMVDVVRKKCSHEGCLTRPSYGLQGT
GKAEFCVQHAEEGMVDVLSKRCFHEGCSKGASYGLRGTRKAEFCVQHAAE
GMVNVKNKRCSHEGCSKGPSYGLRSTRKAEFCVQHAKDLMVDVVSKRCSH
EGCWTRPSYGLRGTRKAEFCAQHAEEGMVDVLSRRCSYEGCSKVPSFGAT
GTGKKKFCARHAEVGMVNVVSRRCSHEDCSKGPSYGLQGSKKAEFCVQHA
AEGMVDVLSRRCSHENCSKGPSYGLQGSRKAEFCVQHAAEGMVNVLSKRC
FHEDCSKQPSYGLRGTRNAEFCSQHAEEGMVDVKNKRCSREGCSKGPSYG
LQGTKKAEFCVRHAAEGMVDVLSKRCSHEGCSKWPSYGLRGSKKAEFCVQ
HAAEGMVNVLSRRCFHEGCSKGPSYGLRGIGKSGFCVQHAAEGMANVVSK
TCPREGCSKGPPHGLPGSRKAEFCVQHAEDGMVDVSSRRCSHEGYSKVPS
NEATGTGKAEFCAPHAEDEMVDALSKRCPHEGDSKGRSYGLQGSRKAEFC
VQLAEEGVRDVLSKGCFHEGFSKQSYGLRGTRKSDFYLQHAAGGMVNVWE
TKSISCVRHSETSASRPDVKLEIAAHEECSGIPDTGKIVNSAPSALSLID
CSTIIGTRSAKRARTVDKSPVSEQLALRASAAGISALDDRSIVKTEFILS
RRSMSSPASQRH*
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