prot_H-paniculata_contig2133.5605.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2133.5605.1
Unique Nameprot_H-paniculata_contig2133.5605.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length445
Homology
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BLAST of mRNA_H-paniculata_contig2133.5605.1 vs. uniprot
Match: D7FV95_ECTSI (DUF1995 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV95_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 2.260e-80
Identity = 146/295 (49.49%), Postives = 196/295 (66.44%), Query Frame = 0 
Query:  122 RRENPFPTSSERGALEASLATQKALVAGKRGLIIDVEVMQMDDQHPEFNPELLVHFVGEISKALATMIGRVKVMYKGETLAATATLAFKKSSDEDAERGIEPRDDISFCSFLAPTFSREELAEGVVDANREVRKFARRAAAQFSEDDNLLVVVGPRTPTDVAVLRKVLRAAEGRSVVVINPKMSYNPRQMTRYETVYQLRQFKVIPIKTNPRDMAARSPLAISLDQRRQTFVTCELGQVVPKVLIVRSFPEDFKLYVDLDGTGFKLMKTFDRLPMLPIVCLTAQTIVGKYQREVT 416
            +RENPFPTSS+RGALEAS A+Q+AL+AGKRGLIIDVEV QMDD H EF+ E+ + F  +ISKALAT+ GRVKV+ +G  LA  AT   +K++ +  E GIEPR DISFCSF       E       D  + +R FA       +E++ + ++V PR   DV VLR+++  A+GR VV+I P+M Y P +   +ETVYQL+Q+ V P+ TNP+       L   L Q +QT  + ELGQV+P+VL+ R+FP DFKLY+D+DG GF+L KT+D  P   +V  TAQ  + + Q+ VT
Sbjct:   67 KRENPFPTSSDRGALEASSASQQALLAGKRGLIIDVEVRQMDDTHAEFDEEMQIDFATDISKALATVSGRVKVLLRGIHLAEKATEMLQKANTKGEEEGIEPRRDISFCSFQMANTDDE-------DDEKSMRDFASTLGLA-NEEERVFLMVCPRRLVDVTVLREIILVAKGRPVVLITPRMPYMPVETDGFETVYQLKQYNVQPVPTNPKKRIKNVRLT-RLGQNQQTIYS-ELGQVIPRVLVTRAFPGDFKLYLDIDGKGFQLEKTYDAKPQPAVVSFTAQNKIREVQQRVT 351
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BLAST of mRNA_H-paniculata_contig2133.5605.1 vs. uniprot
Match: A0A7S1ZN48_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZN48_TRICV)

HSP 1 Score: 54.7 bits (130), Expect = 2.830e-5
Identity = 34/139 (24.46%), Postives = 70/139 (50.36%), Query Frame = 0 
Query:  253 VRKFARRAAAQFSEDDNLLVVVGPRTPTDVAVLRKVL-RAAEGRSVVVINPKMSYNPRQMTRYETVYQLRQFKVIPIKTNPRDMAARSPLAISLDQRRQTFVTCELGQVVPKVLIVRSFPEDFKLYVDLDGTGFKLMKT 390
            VR  +          +++L+++ P +P ++  +R ++ +  + R V+V+N +    PR++   E VY +          +P  + ARS    +   RR+          V KV+++R +P +++++VD+DG GF+L  T
Sbjct:    5 VRAVSANGKLNEEAGEDVLIILSPTSPEEMIAVRGLVDKYGDDRPVIVVNGQFDPMPRELIGAEVVYSI----------SP--LIARSARNPNNPMRREPTEXXXXXXDVTKVVVMRRYPGNWEVFVDVDGNGFELADT 131
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2133.5605.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FV95_ECTSI2.260e-8049.49DUF1995 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A7S1ZN48_TRICV2.830e-524.46Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 69..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..444
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..24
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR018962Domain of unknown function DUF1995PFAMPF09353DUF1995coord: 128..395
e-value: 5.9E-12
score: 46.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2133contigH-paniculata_contig2133:15885..20055 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2133.5605.1mRNA_H-paniculata_contig2133.5605.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2133 14230..20185 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2133.5605.1 ID=prot_H-paniculata_contig2133.5605.1|Name=mRNA_H-paniculata_contig2133.5605.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=445bp
MLQARRHATIIGCLLALIPSATYGFRWIRGVPGCRYLRQTTGSASRQSSC
TSLAAVPRDPRRDQRPGDSDEERQARAEAEAARRKLERMWSSTSFDDDVD
PERAEKEAKLQAELDKRVVGDRRENPFPTSSERGALEASLATQKALVAGK
RGLIIDVEVMQMDDQHPEFNPELLVHFVGEISKALATMIGRVKVMYKGET
LAATATLAFKKSSDEDAERGIEPRDDISFCSFLAPTFSREELAEGVVDAN
REVRKFARRAAAQFSEDDNLLVVVGPRTPTDVAVLRKVLRAAEGRSVVVI
NPKMSYNPRQMTRYETVYQLRQFKVIPIKTNPRDMAARSPLAISLDQRRQ
TFVTCELGQVVPKVLIVRSFPEDFKLYVDLDGTGFKLMKTFDRLPMLPIV
CLTAQTIVGKYQREVTRTQLAEERRQREMEWAKEDQDAYDDDNK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018962DUF1995