prot_H-paniculata_contig2132.5602.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2132.5602.1
Unique Nameprot_H-paniculata_contig2132.5602.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length486
Homology
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BLAST of mRNA_H-paniculata_contig2132.5602.1 vs. uniprot
Match: A0A6H5KTR0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTR0_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 6.180e-17
Identity = 116/201 (57.71%), Postives = 137/201 (68.16%), Query Frame = 0 
Query:  166 RRRPPGPQFLACARGDVHELSEWFATAEGDANARDSEGWPLILTASMHGRLECVRLLLGLGARHDVSSGAGHSPLHVAAANHHCSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETADTVGGAGAEVFVLVKDARRKKQARIAQRLAMLTLHVLWSAGRAEPKTAVTFCGSSSPPSAS 366
            RR+ P   F A  RGD+ EL++W  +  GD N+RD EGW L+  ASMHGR +CV LLL  GARHD  +  GH+             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     V GA AEV  L++ ARR K+ARIAQR A++ +H L ++GRA+P   V    + +   AS
Sbjct:   88 RRKDPPMHFQASVRGDLQELNKWLISG-GDPNSRDDEGWALLHHASMHGREDCVGLLLRYGARHDRVAIGGHTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSGATAEVVHLIQAARRLKKARIAQRFALVKIHCLSNSGRAKPNIGVVISAAETANDAS 287
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2132.5602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KTR0_9PHAE6.180e-1757.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 268..297
e-value: 5.9E-6
score: 35.8
coord: 202..233
e-value: 2.0
score: 17.4
coord: 235..264
e-value: 0.0019
score: 27.5
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 268..299
e-value: 1.1E-5
score: 25.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 268..300
score: 13.437
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 235..267
score: 13.117
NoneNo IPR availableGENE3D1.25.40.960coord: 273..308
e-value: 4.3E-8
score: 35.0
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 160..300
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 160..300
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 170..272
e-value: 1.8E-26
score: 94.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 174..305
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 175..266
e-value: 4.6E-10
score: 39.9
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 172..305
score: 33.66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2132contigH-paniculata_contig2132:12..7002 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2132.5602.1mRNA_H-paniculata_contig2132.5602.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2132 10..7002 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2132.5602.1 ID=prot_H-paniculata_contig2132.5602.1|Name=mRNA_H-paniculata_contig2132.5602.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=486bp
KEERSGTRDTPMMIRRGAEGWGGALAGTYCSRAPVPRERRGITAREGKQL
GERSKRSSLQVPRLWSMCVSVSSVLAKAMFGCTKGCTQTFDPTRSAGVIA
AHEDRSNTNNDSSDGEVGDFPDLPSQTAPKLTRHRETRQEERVASPPRLT
SACPARRAPSSKTGVRRRPPGPQFLACARGDVHELSEWFATAEGDANARD
SEGWPLILTASMHGRLECVRLLLGLGARHDVSSGAGHSPLHVAAANHHCS
VVRSLVEAGASIDAQNCHGNTPLHSAAATGAVDVVTYLLSRSANPDLVNS
LGETADTVGGAGAEVFVLVKDARRKKQARIAQRLAMLTLHVLWSAGRAEP
KTAVTFCGSSSPPSASTSSSSSSSSTTTSPSPSQIMCHAPDPTGPSPSPK
YSGSAASSRESSPSPDNAVEDRVAAVSVAIVDSGIALTTALDENRASKVE
DEDRGVVGVGSCGTDVDGDAVGLTSDICSGNQSNRE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom