prot_H-paniculata_contig21265.5575.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21265.5575.1
Unique Nameprot_H-paniculata_contig21265.5575.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length134
Homology
BLAST of mRNA_H-paniculata_contig21265.5575.1 vs. uniprot
Match: D7FWM8_ECTSI (Vacuolar protein sorting-associated protein 28 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWM8_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 3.570e-65
Identity = 101/134 (75.37%), Postives = 117/134 (87.31%), Query Frame = 0
Query:    1 MSGPYHPHSPGVLQRLPSEIEDEVVLYTDSRDRKKWDKLSEFFAIIITTEHLENARIKSAIGRDEYARECSALISQYKDAESALLANGSIKNTTDFVKEYQMDCPYAMERLVKYGVPATVLHRNVDERDQIGRA 134
            M+  Y    P  L R  S+++DEV LY+++R+R++WDKLSEFFAI+ TTEHLENARIKSAIGRDEY RECSALISQYKDAESALLA+GSI +T DF+KEYQ+DCPYAM+RLVKYGVPATVLHR VDERDQIGRA
Sbjct:    1 MASGYPNSPPAGLARQSSDLDDEVSLYSNARERRQWDKLSEFFAILKTTEHLENARIKSAIGRDEYTRECSALISQYKDAESALLADGSITSTVDFIKEYQLDCPYAMDRLVKYGVPATVLHRQVDERDQIGRA 134          
BLAST of mRNA_H-paniculata_contig21265.5575.1 vs. uniprot
Match: A0A836CDG2_9STRA (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG2_9STRA)

HSP 1 Score: 157 bits (398), Expect = 9.090e-46
Identity = 78/115 (67.83%), Postives = 95/115 (82.61%), Query Frame = 0
Query:   21 EDEVVLYTDS-RDRKKWDKLSEFFAIIITTEHLENARIKSAIGRDEYARECSALISQYKDAESALLANGSIKNTTDFVKEYQMDCPYAMERLVKYGVPATVLHRNVDERDQIGRA 134
            E+E+ L+ ++ ++RKKWD+L+EFFAII T EHLENARIK+AIGRDEY   CS LI+Q+KDAES L++ G I NT+ F+ E+QMD PYAMERLVKYGVPATVLHRN DE D I RA
Sbjct:   32 EEELSLHNNTPKERKKWDQLAEFFAIIKTVEHLENARIKNAIGRDEYTSRCSDLIAQFKDAESTLVSEGHITNTSAFIVEFQMDVPYAMERLVKYGVPATVLHRNHDEHDAISRA 146          
BLAST of mRNA_H-paniculata_contig21265.5575.1 vs. uniprot
Match: A0A6S9EJI3_HETAK (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9EJI3_HETAK)

HSP 1 Score: 117 bits (294), Expect = 3.660e-30
Identity = 55/106 (51.89%), Postives = 82/106 (77.36%), Query Frame = 0
Query:   22 DEVVLYTDSRDRKKWDKLSEFFAIIITTEHLENARIKSAIGRDEYARECSALISQYKDAESALLANGSIKNTTDFVKEYQM-DCPYAMERLVKYGVPATVLHRNVD 126
            ++V LY ++R+R+++D+L+EF+AII TTEHLENAR+ ++I ++EYAREC+ LI Q+KD ES L+    I +T+ F+  + + DC  A ERL+ YGVPATV+HR+ D
Sbjct:   28 EDVKLYKNTRERQRYDRLAEFYAIIKTTEHLENARLSNSIDKEEYARECTTLIQQFKDTESVLIRQNYITDTSSFIAAWGLGDCALAAERLLTYGVPATVVHRSGD 133          
BLAST of mRNA_H-paniculata_contig21265.5575.1 vs. uniprot
Match: A0A484ED39_BRELC (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ED39_BRELC)

HSP 1 Score: 116 bits (290), Expect = 1.590e-29
Identity = 53/112 (47.32%), Postives = 81/112 (72.32%), Query Frame = 0
Query:   17 PSEIEDEVVLYTDSRDRKKWDKLSEFFAIIITTEHLENARIKSAIGRDEYARECSALISQYKDAESALLANGSIKNTTDFVKEYQMDCPYAMERLVKYGVPATVLHRNVDER 128
            P++   EV L+ D+++R+K++ L++ FAI+ TTEHLE A ++ A+  DEY   C+ LISQ+K AE+AL   G I++  +F+ EYQ+DCP A+ERLV+ GVPATV+H   + +
Sbjct:   38 PAQFIQEVKLWGDTKERRKYEDLADLFAILKTTEHLEAAYVRDAVTPDEYTEACTKLISQFKTAETALRLGGFIESVENFIAEYQLDCPRALERLVRIGVPATVVHNTTNRK 149          
BLAST of mRNA_H-paniculata_contig21265.5575.1 vs. uniprot
Match: A0A5D6XFV6_9STRA (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XFV6_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.070e-29
Identity = 59/131 (45.04%), Postives = 84/131 (64.12%), Query Frame = 0
Query:    1 MSGPYHPHSPGVLQRLPSEI---EDEVVLYTDSRDRKKWDKLSEFFAIIITTEHLENARIKSAIGRDEYARECSALISQYKDAESALLANGSIKNTTDFVKEYQMDCPYAMERLVKYGVPATVLHRNVDER 128
            M+G +    P    +LP      + EV L+ D+++R+K++ LS+ FAII TTEHLE A ++ AI  DEY   C+ LISQYK AE+AL   G + N   F+ +Y++DCP A+ERLV+ GVPATV+H     +
Sbjct:    1 MNGGFAASGPNAAFQLPPAAPLADQEVRLWKDTKERRKFEDLSDLFAIIKTTEHLEAAYVRDAITPDEYTEACTKLISQYKTAENALRLGGHLPNIEAFLAQYRLDCPRALERLVRIGVPATVVHNTTSRK 131          
BLAST of mRNA_H-paniculata_contig21265.5575.1 vs. uniprot
Match: W2JRS1_PHYPR (Vacuolar protein sorting-associated protein 28 homolog n=23 Tax=Phytophthora TaxID=4783 RepID=W2JRS1_PHYPR)

HSP 1 Score: 112 bits (281), Expect = 2.660e-28
Identity = 52/106 (49.06%), Postives = 75/106 (70.75%), Query Frame = 0
Query:   23 EVVLYTDSRDRKKWDKLSEFFAIIITTEHLENARIKSAIGRDEYARECSALISQYKDAESALLANGSIKNTTDFVKEYQMDCPYAMERLVKYGVPATVLHRNVDER 128
            E+ L+ D++DR+K++ L++ FAI  TTEHLE A ++ AI  +EY   C+ LISQYK AE+AL   G I +   F+ EY++DCP A+ERLV+ GVPATV+H   + +
Sbjct:   32 EIKLWADTKDRRKYEDLADLFAIFKTTEHLEAAYVRDAITPEEYTEACTKLISQYKTAETALRLGGFIDSVESFIAEYRLDCPRALERLVRIGVPATVVHNTTNRK 137          
BLAST of mRNA_H-paniculata_contig21265.5575.1 vs. uniprot
Match: A0A3M6VS87_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VS87_9STRA)

HSP 1 Score: 116 bits (291), Expect = 9.660e-28
Identity = 56/117 (47.86%), Postives = 80/117 (68.38%), Query Frame = 0
Query:   12 VLQRLPSEIEDEVVLYTDSRDRKKWDKLSEFFAIIITTEHLENARIKSAIGRDEYARECSALISQYKDAESALLANGSIKNTTDFVKEYQMDCPYAMERLVKYGVPATVLHRNVDER 128
            ++   P EI  E+ L+ D++DR+K++ LS+ FAI  TTEHLE A ++ AI  ++Y   C+ LISQYK AE+AL   G I N   F+ EY++DCP A+ERLV+ GVPATV+H   + +
Sbjct:  415 LIDATPDEI--EMKLWDDTKDRRKYEDLSDLFAIFKTTEHLEAAYVRDAITPEQYTEACTKLISQYKTAETALRLGGFIDNVNSFISEYRLDCPRALERLVRIGVPATVVHNTTNRK 529          
BLAST of mRNA_H-paniculata_contig21265.5575.1 vs. uniprot
Match: A0A2D4C4W2_PYTIN (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4W2_PYTIN)

HSP 1 Score: 108 bits (269), Expect = 1.510e-26
Identity = 50/106 (47.17%), Postives = 77/106 (72.64%), Query Frame = 0
Query:   23 EVVLYTDSRDRKKWDKLSEFFAIIITTEHLENARIKSAIGRDEYARECSALISQYKDAESALLANGSIKNTTDFVKEYQMDCPYAMERLVKYGVPATVLHRNVDER 128
            EV L+ ++++R+K++ LS+ FAII TTEHLE A ++ AI  +EY   C+ LISQ+K AE+AL   G + +   F+ +Y++DCP A+ERLV+ GVPATV+H + + +
Sbjct:   28 EVKLWGNTKERRKFEDLSDLFAIIKTTEHLETAYVRDAITPEEYTETCTKLISQFKTAETALRLGGFLDDIEAFISQYRLDCPRALERLVRIGVPATVVHNSTNRK 133          
BLAST of mRNA_H-paniculata_contig21265.5575.1 vs. uniprot
Match: A0A8K1FEK3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEK3_PYTOL)

HSP 1 Score: 112 bits (280), Expect = 2.830e-26
Identity = 51/111 (45.95%), Postives = 79/111 (71.17%), Query Frame = 0
Query:   18 SEIEDEVVLYTDSRDRKKWDKLSEFFAIIITTEHLENARIKSAIGRDEYARECSALISQYKDAESALLANGSIKNTTDFVKEYQMDCPYAMERLVKYGVPATVLHRNVDER 128
            S+  +E+ L+ D++DR+K++ LS+ +AII TTEHLE A ++ AI  +EY   C+ LISQ+K AE+AL   G + +   F+ +Y++DCP A+ERLV+ GVPATV+H   + +
Sbjct:  384 SQGNEEIKLWKDTKDRRKFEDLSDLYAIIKTTEHLETAYVRDAITPEEYTEACTKLISQFKTAETALRMGGFLNDIESFIAQYRLDCPRALERLVRIGVPATVVHNTTNRK 494          
BLAST of mRNA_H-paniculata_contig21265.5575.1 vs. uniprot
Match: W7T9L8_9STRA (Vacuolar protein sorting-associated protein 28 homolog n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T9L8_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.480e-25
Identity = 50/115 (43.48%), Postives = 79/115 (68.70%), Query Frame = 0
Query:   13 LQRLPSEIEDEVVLYTDSRDRKKWDKLSEFFAIIITTEHLENARIKSAIGRDEYARECSALISQYKDAESALLANGSIKNTTDFVKEYQMDCPYAMERLVKYGVPATVLHRNVDE 127
            L   P+ ++ E+ L  ++ +R+K++ L++ F+II  TEHLE A  + AI  D+Y   CS LISQ+K  E+A+LA  ++ +   F+ EY MDCP A+ERL++ GVP+TVL+ +VD+
Sbjct:   25 LSPTPASMKQEIKLINNAAERRKYEDLADLFSIIKATEHLEIAFARDAISEDDYTAACSKLISQFKSTEAAVLAAKTVADARAFMTEYHMDCPRAVERLLRLGVPSTVLNPSVDD 139          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21265.5575.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWM8_ECTSI3.570e-6575.37Vacuolar protein sorting-associated protein 28 hom... [more]
A0A836CDG2_9STRA9.090e-4667.83Vacuolar protein sorting-associated protein 28 hom... [more]
A0A6S9EJI3_HETAK3.660e-3051.89Vacuolar protein sorting-associated protein 28 hom... [more]
A0A484ED39_BRELC1.590e-2947.32Vacuolar protein sorting-associated protein 28 hom... [more]
A0A5D6XFV6_9STRA2.070e-2945.04Vacuolar protein sorting-associated protein 28 hom... [more]
W2JRS1_PHYPR2.660e-2849.06Vacuolar protein sorting-associated protein 28 hom... [more]
A0A3M6VS87_9STRA9.660e-2847.86Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A2D4C4W2_PYTIN1.510e-2647.17Vacuolar protein sorting-associated protein 28 hom... [more]
A0A8K1FEK3_PYTOL2.830e-2645.95Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W7T9L8_9STRA1.480e-2543.48Vacuolar protein sorting-associated protein 28 hom... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 63..83
IPR007143Vacuolar protein sorting-associated Vps28PFAMPF03997VPS28coord: 39..127
e-value: 7.1E-23
score: 81.3
IPR007143Vacuolar protein sorting-associated Vps28PANTHERPTHR12937VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28coord: 19..125
IPR038358VPS28, N-terminal domain superfamilyGENE3D1.20.1440.200coord: 10..114
e-value: 6.7E-24
score: 86.0
IPR017898Vacuolar protein sorting-associated, VPS28, N-terminalPROSITEPS51313VPS28_Ncoord: 13..122
score: 17.457
IPR037202ESCRT assembly domainSUPERFAMILY140111Endosomal sorting complex assembly domaincoord: 23..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21265contigH-paniculata_contig21265:2..3933 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21265.5575.1mRNA_H-paniculata_contig21265.5575.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21265 2..3963 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21265.5575.1 ID=prot_H-paniculata_contig21265.5575.1|Name=mRNA_H-paniculata_contig21265.5575.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=134bp
MSGPYHPHSPGVLQRLPSEIEDEVVLYTDSRDRKKWDKLSEFFAIIITTE
HLENARIKSAIGRDEYARECSALISQYKDAESALLANGSIKNTTDFVKEY
QMDCPYAMERLVKYGVPATVLHRNVDERDQIGRA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007143Vps28
IPR038358VPS28_N_sf
IPR017898VPS28_N
IPR037202ESCRT_assembly_dom