prot_H-paniculata_contig21242.5569.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21242.5569.1
Unique Nameprot_H-paniculata_contig21242.5569.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length255
Homology
BLAST of mRNA_H-paniculata_contig21242.5569.1 vs. uniprot
Match: A0A6H5KKY0_9PHAE (Anaphase-promoting complex subunit 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY0_9PHAE)

HSP 1 Score: 300 bits (767), Expect = 8.230e-92
Identity = 173/268 (64.55%), Postives = 191/268 (71.27%), Query Frame = 0
Query:    1 QRLLVEAAAFERFGYSDMAFTCARCVLQIQAE----FARSSDMEVATTCAINAVLRGKHLSVNYLRPPKTRALPPAAAAATGAEERWTGARKEPGVECVFETALLLMLRQHEAFPHPVTNIWAGGVMVLLHEWMVNRGELAAAEGLGMSLRGCCPLSRGAEAFVEAGLQRVRLLRAQRR---------WHEAVKSASALAKLSDARSLAPQYARALLELSHVRLDAEPTSPVGALPHALRCLAVCESYSLDAIHALAMIHLAEVSERV 255
            QRLLVEA AFERFGYSDMA  CAR VLQ+ A      A +S +E+A+ C INA LRGK L    L PP        +A   G E R  G   E G  CV+  AL + LRQH+ FPHPV+N+WA GVMVLLHEWMVNRGE  AAEGLGMSLR CCPLS+GAE+F+EA LQ+VRLLRAQ R         W EAVK+AS LAKLSD R LAPQYAR LLELS   L AEP SPVGALPHALRCLAVCESY+LDAIHA AM HLAEV  R+
Sbjct:  513 QRLLVEAGAFERFGYSDMAAACARSVLQVGAADVVVAATASSVELASACMINATLRGKRLP--GLPPPSVFC---GSAGTPGEERRGDGEEDEQG--CVYAVALSIALRQHKEFPHPVSNVWAAGVMVLLHEWMVNRGEFRAAEGLGMSLRACCPLSQGAESFIEAHLQKVRLLRAQGRQVIPQPPVRWAEAVKAASDLAKLSDTRGLAPQYARLLLELSRAWLGAEPASPVGALPHALRCLAVCESYTLDAIHASAMTHLAEVHLRM 773          
BLAST of mRNA_H-paniculata_contig21242.5569.1 vs. uniprot
Match: D7FTQ0_ECTSI (Anaphase-promoting complex subunit 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ0_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 2.580e-72
Identity = 145/255 (56.86%), Postives = 160/255 (62.75%), Query Frame = 0
Query:    1 QRLLVEAAAFERFGYSDMAFTCARCVLQIQAEFARSSDMEVATTCAINAVLRGKHLSVNYLRPPKTRALPPAAAAATGAEERWTGARKEPGVECVFETALLLMLRQHEAFPHPVTNIWAGGVMVLLHEWMVNRGELAAAEGLGMSLRGCCPLSRGAEAFVEAGLQRVRLLRAQRRWHEAVKSASALAKLSDARSLAPQYARALLELSHVRLDAEPTSPVGALPHALRCLAVCESYSLDAIHALAMIHLAEVSERV 255
            QRLLVEA AFERFGYSDMA  CAR VLQI  + A +S +E+A+ C INA LRGK L    L PP        +A   G E +  G   E G  CVF  AL + LRQH+ FPHPV+N+WA GVMVLLHEWMVNRGE  AAEG                                  W EAVK+AS LAKLSD R LAPQYAR LLELS   L AEP SPVGALPHALRCLAVCESY+LDAIHA AM HLA+V  R+
Sbjct:  344 QRLLVEAGAFERFGYSDMAAACARSVLQIHGDIATASSVELASACIINATLRGKTLP--GLPPPPVFG---GSAGTPGEERKGDGEEDEQG--CVFAVALSIALRQHKEFPHPVSNVWAAGVMVLLHEWMVNRGEFRAAEG----------------------------------WAEAVKAASDLAKLSDTRGLAPQYARLLLELSRAWLGAEPASPVGALPHALRCLAVCESYTLDAIHASAMTHLAQVHLRM 557          
BLAST of mRNA_H-paniculata_contig21242.5569.1 vs. uniprot
Match: F0Y6Q2_AURAN (Anaphase-promoting complex subunit 5 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6Q2_AURAN)

HSP 1 Score: 87.8 bits (216), Expect = 5.270e-16
Identity = 58/140 (41.43%), Postives = 76/140 (54.29%), Query Frame = 0
Query:  115 TNIWAGGVMVLLHEWMVNRGELAAAEGLGMSLRGCCPLSR--GAEAFVEAGLQRVRLLRAQRRWHEAVKSASALAKLSDARSLAPQYARALLELSHVRLDAEPTSPVGALPHALRCLAVCESYSLDAIHALAMIHLAEVS 252
            +NI      +L  EW ++RG    AE L  +L G  P+    G EA VEA     RLL  + RW  AVK+ + L +    + L  Q A  L+  +H RLDA P SPV AL  ALRCLA+CE ++LD +HA A   L  V+
Sbjct:  669 SNIAIRAEYLLKFEWALHRGANKRAEALASALLGVSPVQADLGPEAHVEAVRASARLLARRERWERAVKTMNELERYCGRKGLWAQQAECLMLGAHWRLDACPQSPVPALSPALRCLALCEKFALDHLHAEAAFALGRVN 808          
BLAST of mRNA_H-paniculata_contig21242.5569.1 vs. uniprot
Match: A0A7S4E887_9STRA (Anaphase-promoting complex subunit 5 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E887_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 4.130e-9
Identity = 57/164 (34.76%), Postives = 80/164 (48.78%), Query Frame = 0
Query:   90 PGVECVFETALLLMLRQHEAFPHPVTNIWAGGVMVLLHEWMVNRGELAAAEGLGMSLRGCCPLSRG--AEAFVEAGLQRVRLLRAQRRWHEAVKSASALAKLSDARSLAPQYARALLELSHVRLDAEPTSPVGALPHALRCLAVCESYSLDAIHALAMIHLAEV 251
            PG+   ++ AL   L ++       +NI      +L  EW V+R  L  A  L  +L G  P       E  VEA    +RL  A+  +  AVK A+ L ++   R L    A+ L + S   LD  P  PV A+  ALR LA+CE ++LDA+HA A + LA V
Sbjct:  640 PGLNVAYDIALK-KLEENRCPNKGASNIVERAQYLLRFEWAVHRHALRRAAALHEALLGVSPRQSDYDVECHVEALRCDLRLSVARDDYERAVKGAAKLERICGNRGLWALQAKLLCDRSKWLLDGCPQEPVPAMNPALRALALCEQWALDALHAEATLRLALV 802          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21242.5569.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KKY0_9PHAE8.230e-9264.55Anaphase-promoting complex subunit 5 n=1 Tax=Ectoc... [more]
D7FTQ0_ECTSI2.580e-7256.86Anaphase-promoting complex subunit 5 n=1 Tax=Ectoc... [more]
F0Y6Q2_AURAN5.270e-1641.43Anaphase-promoting complex subunit 5 n=1 Tax=Aureo... [more]
A0A7S4E887_9STRA4.130e-934.76Anaphase-promoting complex subunit 5 n=1 Tax=Pelag... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12830:SF9ANAPHASE-PROMOTING COMPLEX SUBUNIT 5coord: 99..251
IPR037679Anaphase-promoting complex subunit 5PANTHERPTHR12830FAMILY NOT NAMEDcoord: 99..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21242contigH-paniculata_contig21242:1959..4311 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21242.5569.1mRNA_H-paniculata_contig21242.5569.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21242 1959..4311 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21242.5569.1 ID=prot_H-paniculata_contig21242.5569.1|Name=mRNA_H-paniculata_contig21242.5569.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=255bp
QRLLVEAAAFERFGYSDMAFTCARCVLQIQAEFARSSDMEVATTCAINAV
LRGKHLSVNYLRPPKTRALPPAAAAATGAEERWTGARKEPGVECVFETAL
LLMLRQHEAFPHPVTNIWAGGVMVLLHEWMVNRGELAAAEGLGMSLRGCC
PLSRGAEAFVEAGLQRVRLLRAQRRWHEAVKSASALAKLSDARSLAPQYA
RALLELSHVRLDAEPTSPVGALPHALRCLAVCESYSLDAIHALAMIHLAE
VSERV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037679Apc5