prot_H-paniculata_contig2116.5539.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2116.5539.1
Unique Nameprot_H-paniculata_contig2116.5539.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length222
Homology
BLAST of mRNA_H-paniculata_contig2116.5539.1 vs. uniprot
Match: D8LJW2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJW2_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 3.160e-82
Identity = 127/196 (64.80%), Postives = 155/196 (79.08%), Query Frame = 0
Query:   31 FCVEVVAFPQSSPKSPGVPFRTYCDPSARRSAARGVAVAPVPGDEGQQGCAGTSSAGLPSYMSSLLPIRFTNEKVQLSEGTSFRIHLDADWLETDVIIVEFRLMYRPLPDSTSSGVESDPAPSEETPPPE----ALKQVGKVTLHAKCASAKGGLHRYHPLVFPQPYLCLLDVTFHMALTAINHPGGPAGIASAIA 222
            F VE V FP S+P +PGVP RT+ DPSARRS ARGV V P  GD  Q+G +G S+AGLPSY SSLLPIRFTNE+VQL+EG  FR+H+DADW+ETDVI +EFRL+  PLP++ ++  E   A +  T  PE     LK+VGKVTLH KCAS+KGGLHRYHPLVF QP+LC++D+T HMALT++NHPGGPAG+A+AIA
Sbjct:   14 FGVEAVVFPVSNPYAPGVPVRTFHDPSARRSTARGVLVNPAEGDVDQRGSSGISAAGLPSYTSSLLPIRFTNEEVQLNEGCLFRVHIDADWVETDVIAIEFRLLTTPLPENDAAPTEDVIAAAGATVTPEKKPITLKEVGKVTLHTKCASSKGGLHRYHPLVFKQPHLCVVDITLHMALTSVNHPGGPAGLAAAIA 209          
BLAST of mRNA_H-paniculata_contig2116.5539.1 vs. uniprot
Match: A0A8J2WP39_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WP39_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.020e-6
Identity = 49/208 (23.56%), Postives = 90/208 (43.27%), Query Frame = 0
Query:   10 TVELLLHIHSFKNIDLRSRGHFCVEVVAFPQSSPKSPGVPFRTYCDPSARRSAARGVAVAPVPGDEGQQGCAGTSSAGLPSYMSSLLPIRFTNEKVQLSEGTSFRIHLDAD-------WLETDVIIVEFRLMYRPL-----PDSTSSGVESDPAPSEETPPPEALKQVGKVTLHAKCASAKGGLHRYHPLVFPQPYLCLLDVTFHMAL 205
            T+++++H+H F+N+DL SRG + V      + + K   +P   Y  PS   +  R   +      +        SS+    + +    I++ +E+++L+EG  F++ ++A        +   + I +   L+   L     P S +S   S    +E+        +V   TL  +       +H Y P+ F   + C LDVT H AL
Sbjct:    6 TLDVVVHLHRFRNVDLFSRGIYMVRAAV--KCNTKQ-AIPHGCYSKPSVLSTFVRDQEIPQTHASDLPAAQVVDSSS---EFSTRAFVIKYRDERLELNEGAQFQLLIEAKDSGDRLIFANDEPIDITLELLMAELEKPGSPPSRTSPRRSSAVAAEKPSLSPTFSRVATQTLRVRRDPTTNQVHAYFPVTFSSMHFCQLDVTVHCAL 207          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2116.5539.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJW2_ECTSI3.160e-8264.80Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A8J2WP39_9STRA2.020e-623.56Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022122Protein FAM135PFAMPF12394DUF3657coord: 131..204
e-value: 1.5E-5
score: 25.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2116contigH-paniculata_contig2116:3737..13614 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2116.5539.1mRNA_H-paniculata_contig2116.5539.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2116 3737..13614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2116.5539.1 ID=prot_H-paniculata_contig2116.5539.1|Name=mRNA_H-paniculata_contig2116.5539.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=222bp
MSDGGGARATVELLLHIHSFKNIDLRSRGHFCVEVVAFPQSSPKSPGVPF
RTYCDPSARRSAARGVAVAPVPGDEGQQGCAGTSSAGLPSYMSSLLPIRF
TNEKVQLSEGTSFRIHLDADWLETDVIIVEFRLMYRPLPDSTSSGVESDP
APSEETPPPEALKQVGKVTLHAKCASAKGGLHRYHPLVFPQPYLCLLDVT
FHMALTAINHPGGPAGIASAIA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022122DUF3657