prot_H-paniculata_contig2112.5519.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2112.5519.1
Unique Nameprot_H-paniculata_contig2112.5519.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length309
Homology
BLAST of mRNA_H-paniculata_contig2112.5519.1 vs. uniprot
Match: D8LI95_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI95_ECTSI)

HSP 1 Score: 397 bits (1020), Expect = 2.820e-136
Identity = 193/268 (72.01%), Postives = 223/268 (83.21%), Query Frame = 0
Query:   41 DLLARSMEWLNLHELGEVCSVSHPWKAAAQEDGIWAFWWSRRFLEPPPPKRGRAHDGVLKRLYQYRFRDPLVGDKIEVSWEGRFRLESLDVFVGRSWWEATVVQKVDLYRYRIHYPGWDSNWDEWVSRDRLRWPVDSSYLSTSFKVRQVVEVWCTGTHVKGAWLQARVKQIKQDQVSLKNVLASSPRTIWVPRANCRKVSAGSGGDPTGDR------GRSRFSKLDISRQEALTRTLRGLSAGAR-IPLAGIAGLRGAVRRRIARGRM 301
            +LLARSME LN+ +LG+VC V+  W+ AA+ED +W FWW+RRF E PPP+RGRA  G LK+L++YR  DPLVGDK+EVSWEGRFRLESLDVFVGRSWWEATVVQK+D ++Y+IHYPGWDSNWDEWV RDRLRWPVD SYLST+F+VR+VVEVWCTGTHVKGAWLQARV+QIKQDQVSLKNVLASSPRT+WVPR+  R+V  G+    +  R      G  R SKLD SRQEAL R LRGLSAGAR +P AG+AGLRGAVRRR +  RM
Sbjct:   32 ELLARSMELLNMVDLGQVCCVNKDWRNAAEEDAVWRFWWARRFREDPPPQRGRARAGHLKQLHRYRLEDPLVGDKVEVSWEGRFRLESLDVFVGRSWWEATVVQKMDGFKYKIHYPGWDSNWDEWVVRDRLRWPVDPSYLSTTFRVREVVEVWCTGTHVKGAWLQARVRQIKQDQVSLKNVLASSPRTVWVPRSKVRRVCTGASCVNSSSRNGXXXXGGGRSSKLDASRQEALARALRGLSAGARRLPRAGLAGLRGAVRRRASLSRM 299          
BLAST of mRNA_H-paniculata_contig2112.5519.1 vs. uniprot
Match: W7T606_9STRA (F-box domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T606_9STRA)

HSP 1 Score: 170 bits (431), Expect = 4.170e-46
Identity = 93/239 (38.91%), Postives = 135/239 (56.49%), Query Frame = 0
Query:   28 RSRDKKMPSHVIHDLLARSMEWLNLHELGEVCSVSHPWKAAAQEDGIWAFWWSRRFLEPPPPKRGRAHDGV---LKRLYQYRFRDPLVGDKIEVSWEGRFRLESLDVFVGRSWWEATVVQKVDL-YRYRIHYPGWDSNWDEWVSRDRLRWPVDSSYLSTSFKVRQVVEVWCTGTHVKGAWLQARVKQIKQDQVSLKNVLASSPRTIWVPRANCRKVSAGSGGDPTGDRGRSRFSKLDIS 262
            + R  K+PS V    L  +  ++++ ELG   SV   WK   Q   +W   + +RF     P       G+    + L++ R  DP VGD +EV+W+G+FRLES+D++ G +WW A VV+K +   RY+IHYPGWDS WDEWV+RDRLRW V+   L+        VE+WC G++V GAWL+A+V+++K     +  VL+S    +WV R   R +S   G    G +G S F   D +
Sbjct:  191 KDRVNKLPSAV----LIYTASFMSISELGMAASVCQQWKETVQSVAVWKPLYIKRFHFLHSPDDASTGIGLPLSYQALFRARLLDPHVGDLVEVAWKGKFRLESMDIYQGLAWWSAVVVEKGENGARYKIHYPGWDSRWDEWVARDRLRWTVEQD-LNKRIMPNDDVEIWCCGSNVPGAWLEAKVRKVKGQTYCVGRVLSSG--ALWVNRERVR-ISPKGGARSLGKQGASNFFSRDAA 421          
BLAST of mRNA_H-paniculata_contig2112.5519.1 vs. uniprot
Match: A0A4D9D060_9STRA (F-box domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D060_9STRA)

HSP 1 Score: 162 bits (411), Expect = 1.310e-44
Identity = 83/207 (40.10%), Postives = 119/207 (57.49%), Query Frame = 0
Query:   28 RSRDKKMPSHVIHDLLARSMEWLNLHELGEVCSVSHPWKAAAQEDGIWAFWWSRRFL---EPPPPKRGRAHDGVLKRLYQYRFRDPLVGDKIEVSWEGRFRLESLDVFVGRSWWEATVVQKVDL-YRYRIHYPGWDSNWDEWVSRDRLRWPVDSSYLSTSFKVRQVVEVWCTGTHVKGAWLQARVKQIKQDQVSLKNVLASSPRTIW 230
            + R  K+PS V    L  +  ++++ ELG   SV   WK   Q   +W   + +RF     P     G         L++ R  DP VGD +EV+W+G+FRLES+D++ G +WW A VV+K +   RY+IHYPGWDS WDEWV RDRLRW V+   L+        VE+WC G++V GAWL+A+V+++K     +  VL+S    +W
Sbjct:   69 KDRVNKLPSAV----LIYTASFMSISELGMAASVCQQWKETVQSGAVWKPLYIKRFHFLHSPDDASTGIGLPVSYHALFRARLLDPYVGDLVEVAWKGKFRLESMDIYQGLAWWSAVVVEKGENGARYKIHYPGWDSRWDEWVPRDRLRWTVEQD-LNKRIMPNDDVEIWCCGSNVPGAWLEAKVRKVKGQTYCVGRVLSSG--ALW 268          
BLAST of mRNA_H-paniculata_contig2112.5519.1 vs. uniprot
Match: A0A835ZI68_9STRA (Tudor-knot domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI68_9STRA)

HSP 1 Score: 160 bits (404), Expect = 3.000e-44
Identity = 84/202 (41.58%), Postives = 115/202 (56.93%), Query Frame = 0
Query:   47 MEWLNLHELGEVCSVSHPWKAAAQEDGIWAFWWSRRFLEPPPPKRGRAHDGVL-----KRLYQYRFRDPLVGDKIEVSWEGRFRLESLDVFVGRSWWEATVVQKVD-LYRYRIHYPGWDSNWDEWVSRDRLRWPVDSS---YLSTSFKVRQVVEVWCTGTHVKGAWLQARVKQIKQDQVSLKNVLASSPRTIWVPRANCRKV 239
            M +L+L ELG +  +S  W+  ++ D +W   +  RF          +   V      K  +  R   P VGD++EV+W G+FRLESL+VF G +WW A VV + D   RY++HYPGW+  WDEWVSR+RLRW  D+     L    +V   VEVWC G HV GAWL+ RV  I+ D+  L ++LA+   T  +P A CR V
Sbjct:    1 MHFLSLPELGTLARLSKSWRQLSEHDYLWREPYKARFKISDSLLAAGSDAAVTPPLSCKEAFARRLLHPQVGDRVEVAWRGKFRLESLEVFSGLAWWLADVVARSDDCRRYKVHYPGWEPRWDEWVSRERLRWGNDARAARLLGHPVEVGDTVEVWCGGVHVPGAWLEGRVSCIRSDRAYLGDMLAAG--TFSIPLARCRLV 200          
BLAST of mRNA_H-paniculata_contig2112.5519.1 vs. uniprot
Match: A0A835ZFT0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFT0_9STRA)

HSP 1 Score: 149 bits (376), Expect = 1.400e-39
Identity = 86/233 (36.91%), Postives = 131/233 (56.22%), Query Frame = 0
Query:   48 EWLNLHELGE-VCSVSHPWKAAAQEDGIWAFWWSRRFLEPPPPKRGRAHDGV---------LKRLYQYRFRDPLVGDKIEVSWEGRFRLESLDVFVGRSWWEATVVQ-KVDLYRYRIHYPGWDSNWDEWVSRDRLRWPVD---SSYLSTSFKVRQVVEVWCTGTHVKGAWLQARVKQIKQDQVSLKNVLASSPRTIWVPRANCRKVSAGSGGDPTGDRGRSRFSKL--DISRQ 264
            ++L L E G+ VC VS  W+   + + +W   +  RF    P +    H            +K L+  R   P VGD++EV+W G+FRLESL+++ G +WW A +V+   D  RY++HYPGW++ WDE+V R+RLRW  D   +        V  +VE+WC GT+V GAWL+ RV  I+ ++V L +V+A    ++   R  CR VS G+   P  + GRS  ++   +I+RQ
Sbjct:   42 QFLTLEERGKAVCCVSRKWRQLGEHNHLWREPYLTRFKFHSPQEDLATHTEAQELAQPGPKVKDLFARRLVRPQVGDRVEVAWRGKFRLESLEIYNGLAWWLAEIVECDADGQRYKVHYPGWEARWDEFVPRERLRWGNDRRAAQLRDERIAVGDMVEIWCGGTNVPGAWLEGRVSSIRGERVFLGDVVAEGFFSVTEER--CRLVSKGASAPPQSE-GRSDTARALCNIARQ 271          
BLAST of mRNA_H-paniculata_contig2112.5519.1 vs. uniprot
Match: A0A7S4A403_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A403_9STRA)

HSP 1 Score: 150 bits (380), Expect = 2.030e-39
Identity = 81/238 (34.03%), Postives = 126/238 (52.94%), Query Frame = 0
Query:   31 DKKMPSHVIHDLLARS-----MEWLNLHELGEVCSVSHPWKAAAQEDGIWAFWWSRRFLEPPPPKRGRAHDGVL---KRLYQYRFRDPLVGDKIEVSWEGRFRLESLDVFVGRSWWEATVVQKVDLYR-----------------YRIHYPGWDSNWDEWVSRDRLRWPVDSSYLSTSFKVRQVVEVWCTGTHVKGAWLQARVKQIKQDQVSLKNVLASSPRTIWVPRANCRKVSAGS 243
            +++ P  V+ + L R      + +L++     + +VS  W + + ED +W   +  RF        G          K+ Y+ R  DP VGD +EV+W G+FRLESL+++ G +WW A VV KV L                   Y++ +PGW+  WDEWVSRDRLRW   ++  + + K R  VEVWC   +V GAWL+A V++I+ D V +  VL++   ++WV R+  R+  + S
Sbjct:   85 EEEAPPVVVSNTLPRDTMLLCLSFLDVTAHTTLSTVSRDWLSLSSEDALWRDHYLNRFSGGSDEGDGETSADEYEDYKQEYKQRLEDPHVGDDVEVAWRGKFRLESLEIYRGTAWWVAVVVDKVALDAASGSPGRGRKIHAAKAWYKVTFPGWEGRWDEWVSRDRLRWRAKNTQEADALKPRDFVEVWCGSQNVPGAWLEASVQKIRGDAVEVGRVLSTG--SLWVDRSRVRRARSSS 320          
BLAST of mRNA_H-paniculata_contig2112.5519.1 vs. uniprot
Match: A0A8J2SC81_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SC81_9STRA)

HSP 1 Score: 136 bits (343), Expect = 4.520e-34
Identity = 79/234 (33.76%), Postives = 118/234 (50.43%), Query Frame = 0
Query:   23 IHRMVRSRDKKMPSHVIHDLLARSMEWLNLHELGEVCSVSHPWKAAAQEDGIWAFWWSRRFLEPPPPKRGRAHDGVLKRLYQYRFRDPLVGDKIEVSWEGRFRLESLDVFVGRSWWEATVVQKVDLY-----------------RYRIHYPGWDSNWDEWVSRDRLRWPVDSSYLSTSFKVRQVVEVWCTGTHVKGAWLQARVKQIKQDQVSLKNVLASSPRTIWVPRANCRKV 239
            IH     R   +P  ++ D +  +++  NL     + +VS   + AA  D  W   ++RRF               L+  ++ R  DP  GD++E++W GRFRLE L+V+ G +WW A VV+K D                   +Y++HY  WD+ WDEWV+RD+LRWPV             V EVWC+G+ V GAWL+A V  ++ +   + +V ASS R +WV R   R +
Sbjct:   75 IHYYPPDRLAGLPRELLEDAVLANLDVKNL---AAMAAVSRAARRAASSDAAWRPQYARRFGAADDASEHFDFGASLRESFRQRLGDPAPGDRVEIAWRGRFRLEGLEVYRGLAWWAAEVVEKRDAXXXXXXAPDCPLDDRRARKYKVHYVHWDARWDEWVARDQLRWPVPEGRTGVVASGDDV-EVWCSGSAVPGAWLRAVVTAVEGELYCVGDV-ASSGR-LWVRRDRVRLI 302          
BLAST of mRNA_H-paniculata_contig2112.5519.1 vs. uniprot
Match: D7FY36_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY36_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 4.070e-33
Identity = 68/158 (43.04%), Postives = 95/158 (60.13%), Query Frame = 0
Query:   99 LKRLYQYRFRDPLVGDKIEVSWEGRFRLESLDVFVGRSWWEATVVQKVDLYRY-RIHYPGWDSNWDEWVSRDRLRWPVDSSYLSTSFK-----VRQVVEVWCTGTHVKGAWLQARVKQIKQDQVSLKNVLASSPRTIWVPRANCRKVSAGSGGDPTGD 250
             K  Y+ R  DP VGD+++V+W+G+FRLESL+V+ G +WW A VV K +   Y ++HYPGW+  WDEWV RDRLRW   + +L+   K         VEVWC G HV GAWL+A V ++++++V L  VL S     W    + R +  G   D  G+
Sbjct:  146 FKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDKGEKPGYYKVHYPGWEPKWDEWVVRDRLRW--GNEHLAAPLKGIPLQAGDAVEVWCKGLHVPGAWLEAVVYEVEKERVYLGEVLTSGH--FWARTEHVRLIQKGPVDDDGGE 299          
BLAST of mRNA_H-paniculata_contig2112.5519.1 vs. uniprot
Match: A0A7S3K1B0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1B0_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.760e-30
Identity = 85/259 (32.82%), Postives = 109/259 (42.08%), Query Frame = 0
Query:   54 ELGEVCSVSHPWKAAAQEDGIWAFWWSRRFLEPPPPKRGRAHD--GVLKRLYQYRFRDPLVGDKIEVSWEGRFRLESLDVFVGRSWWEATVVQK-----------------------------------VDLY------------------------------------RYRIHYPGWDSNWDEWVSRDRLRWPVDSSYLSTSFKVRQVVEVWCTGTHVKGAWLQARVKQIKQDQVSLKNVLASSPRTIWVPRANCRKV 239
            +L  + SVS  +K  A  D  W   + R F      K G  +D    LK  Y  R RDP  GD++EV+W+GRFRLE L+V+ G +WW A V +K                                   VDL                                     RYR+HY  WDS WDEWVSR++LRWPV      T  ++   VEVWC+G  V GAWL+A V  +  D   + NV +S    +WV R   R V
Sbjct:  156 QLAHLASVSRGFKQLADSDASWQATYDRAFGNS---KAGVTYDYGASLKESYHQRIRDPSTGDRVEVAWQGRFRLEGLEVYRGLAWWAAEVAEKRPNDIASNEEDMIPPEQFPPQHIDNQVVPHEQNHEVDLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNTSKRYRVHYLNWDSRWDEWVSREQLRWPVQEGKNCT-IEIGDDVEVWCSGNTVPGAWLRAVVDAVDDDLFCVGNVASSGH--LWVSRDRVRLV 408          
BLAST of mRNA_H-paniculata_contig2112.5519.1 vs. uniprot
Match: A0A7S2XXB7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXB7_9STRA)

HSP 1 Score: 101 bits (252), Expect = 2.910e-23
Identity = 44/87 (50.57%), Postives = 63/87 (72.41%), Query Frame = 0
Query:  151 YRIHYPGWDSNWDEWVSRDRLRWPVDSSYLSTSFKVRQVVEVWCTGTHVKGAWLQARVKQIKQDQVSLKNVLASSPRTIWVPRANCR 237
            Y+IHYPGWD+ WDEWV R+RLRW +  + +  +F+V   VEVWCTG++V GAWL+A+VK IK +Q+ +  +L+S P  +WV +   R
Sbjct:    1 YKIHYPGWDTRWDEWVPRNRLRWAMHHNPME-NFQVNDRVEVWCTGSNVPGAWLEAQVKAIKGEQIFVGKMLSSGP--LWVAKTRVR 84          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2112.5519.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LI95_ECTSI2.820e-13672.01F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
W7T606_9STRA4.170e-4638.91F-box domain-containing protein n=1 Tax=Nannochlor... [more]
A0A4D9D060_9STRA1.310e-4440.10F-box domain-containing protein n=1 Tax=Nannochlor... [more]
A0A835ZI68_9STRA3.000e-4441.58Tudor-knot domain-containing protein n=1 Tax=Tribo... [more]
A0A835ZFT0_9STRA1.400e-3936.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4A403_9STRA2.030e-3934.03Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A8J2SC81_9STRA4.520e-3433.76Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
D7FY36_ECTSI4.070e-3343.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3K1B0_9STRA2.760e-3032.82Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2XXB7_9STRA2.910e-2350.57Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 108..182
e-value: 1.8E-11
score: 45.6
IPR025995RNA binding activity-knot of a chromodomainPFAMPF11717Tudor-knotcoord: 136..172
e-value: 4.3E-5
score: 23.3
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 129..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2112contigH-paniculata_contig2112:500..7270 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2112.5519.1mRNA_H-paniculata_contig2112.5519.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2112 279..8371 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2112.5519.1 ID=prot_H-paniculata_contig2112.5519.1|Name=mRNA_H-paniculata_contig2112.5519.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=309bp
MAFNFVEMTYNGWRPRAGRTTQIHRMVRSRDKKMPSHVIHDLLARSMEWL
NLHELGEVCSVSHPWKAAAQEDGIWAFWWSRRFLEPPPPKRGRAHDGVLK
RLYQYRFRDPLVGDKIEVSWEGRFRLESLDVFVGRSWWEATVVQKVDLYR
YRIHYPGWDSNWDEWVSRDRLRWPVDSSYLSTSFKVRQVVEVWCTGTHVK
GAWLQARVKQIKQDQVSLKNVLASSPRTIWVPRANCRKVSAGSGGDPTGD
RGRSRFSKLDISRQEALTRTLRGLSAGARIPLAGIAGLRGAVRRRIARGR
MVGFRSGW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025995Tudor-knot
IPR016197Chromo-like_dom_sf