prot_H-paniculata_contig21103.5516.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21103.5516.1
Unique Nameprot_H-paniculata_contig21103.5516.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length97
Homology
BLAST of mRNA_H-paniculata_contig21103.5516.1 vs. uniprot
Match: D7FTL8_ECTSI (Leucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL8_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 3.780e-45
Identity = 76/87 (87.36%), Postives = 80/87 (91.95%), Query Frame = 0
Query:    1 KGAKTKLVAKTGGATVRQWDIMKMMVPEDEIPRFTDPLVWLQYFPPRGRKDVTKFGTAVDWRRSFVTTSVNPFYDSFIRWQFNTLKA 87
            KG KTKL+AKTGGA VRQWDIMKMMVPEDEI  FTDPL WL+YFPPRGR D+ KFGTAVDWRRSFVTTSVNP+YDSFIRWQFNTLKA
Sbjct:  185 KGGKTKLIAKTGGAEVRQWDIMKMMVPEDEIRNFTDPLKWLEYFPPRGRDDMIKFGTAVDWRRSFVTTSVNPYYDSFIRWQFNTLKA 271          
BLAST of mRNA_H-paniculata_contig21103.5516.1 vs. uniprot
Match: A0A835YRC2_9STRA (Leucine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRC2_9STRA)

HSP 1 Score: 154 bits (389), Expect = 1.650e-41
Identity = 73/104 (70.19%), Postives = 82/104 (78.85%), Query Frame = 0
Query:    1 KGAKTKLVAKTGGATVRQWDIMKMMVPEDEIPRFTDPLVWLQYFPPRGRKDVTKFGTAVDWRRSFVTTSVNPFYDSFIRWQFNTLKA--------RTVQYGTVD 96
            KG K+KLVAKTGG  VRQWDIMKMMVPEDEI  FTDPL WL+YFPP G+ D+ +FG AVDWRRSF+TT+VNP+YDSFIRWQFNTLKA        R   Y T+D
Sbjct:  138 KGKKSKLVAKTGGNVVRQWDIMKMMVPEDEISAFTDPLQWLKYFPPHGKADLERFGAAVDWRRSFITTAVNPYYDSFIRWQFNTLKANDKVRFGKRANVYSTLD 241          
BLAST of mRNA_H-paniculata_contig21103.5516.1 vs. uniprot
Match: A0A7S0GHA7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GHA7_9STRA)

HSP 1 Score: 125 bits (314), Expect = 3.380e-35
Identity = 57/88 (64.77%), Postives = 66/88 (75.00%), Query Frame = 0
Query:    1 KGAKTKLVAKTGGATVRQWDIMKMMVPEDEIPRFTDPLVWLQYFPPRGRKDVTKFGTAVDWRRSFVTTSVNPFYDSFIRWQFNTLKAR 88
            KG KTKLV K+G   VRQW I+  MVP + IP F DPLVWL YFPPRG   +  FG  VDWRRSF+TT+VNP+YD+FIRWQF TL+ R
Sbjct:    5 KGNKTKLVQKSGTGIVRQWTILAKMVPLELIPSFIDPLVWLSYFPPRGVTHLNNFGAGVDWRRSFITTAVNPYYDAFIRWQFETLRKR 92          
BLAST of mRNA_H-paniculata_contig21103.5516.1 vs. uniprot
Match: A0A7R9UHB7_9STRA (Leucine--tRNA ligase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UHB7_9STRA)

HSP 1 Score: 135 bits (340), Expect = 6.710e-35
Identity = 64/94 (68.09%), Postives = 73/94 (77.66%), Query Frame = 0
Query:    1 KGAKTKLVAKTGGATVRQWDIMKMMVPEDEIPRFTDPLVWLQYFPPRGRKDVTKFGTAVDWRRSFVTTSVNPFYDSFIRWQFNTLKAR-TVQYG 93
            KG K+KLVAKTG   VRQW+I+K MVPE EIP F DPL WLQYFPP G  D+  FG A DWRRSF+TTSVNP+YDSFIRWQF  L+A   ++YG
Sbjct:   76 KGKKSKLVAKTGTGVVRQWNILKRMVPEAEIPEFVDPLKWLQYFPPYGMVDLKAFGVASDWRRSFITTSVNPYYDSFIRWQFAKLRAGGRIKYG 169          
BLAST of mRNA_H-paniculata_contig21103.5516.1 vs. uniprot
Match: A0A1E7EQY5_9STRA (Leucine--tRNA ligase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EQY5_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.250e-34
Identity = 62/94 (65.96%), Postives = 75/94 (79.79%), Query Frame = 0
Query:    1 KGAKTKLVAKTGGATVRQWDIMKMMVPEDEIPRFTDPLVWLQYFPPRGRKDVTKFGTAVDWRRSFVTTSVNPFYDSFIRWQFNTL-KARTVQYG 93
            K  +TKLVAKTGG  VRQW+I+KMMVPEDEIP+F DP  WLQYFPP   + +  FG  VDWRRSF+TT+VNP+YD+FIRWQF+TL K + V +G
Sbjct:  158 KSGRTKLVAKTGGGIVRQWNILKMMVPEDEIPQFVDPYHWLQYFPPICVEHLKNFGACVDWRRSFITTAVNPYYDAFIRWQFDTLRKKKKVLFG 251          
BLAST of mRNA_H-paniculata_contig21103.5516.1 vs. uniprot
Match: A0A7S2PN01_9STRA (Leucine--tRNA ligase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PN01_9STRA)

HSP 1 Score: 128 bits (321), Expect = 2.800e-33
Identity = 55/88 (62.50%), Postives = 70/88 (79.55%), Query Frame = 0
Query:    1 KGAKTKLVAKTGGATVRQWDIMKMMVPEDEIPRFTDPLVWLQYFPPRGRKDVTKFGTAVDWRRSFVTTSVNPFYDSFIRWQFNTLKAR 88
            KG KTKL+ KTG   VRQW+I+K MVPE+EIP+F DP+ WL +FPP G   + +FG+ VDWRR+F+TTSVN +YD+FIRWQFN LK +
Sbjct:  166 KGGKTKLIQKTGTGIVRQWNILKRMVPEEEIPKFADPIYWLMHFPPIGVDHMKRFGSGVDWRRAFITTSVNGYYDAFIRWQFNVLKQK 253          
BLAST of mRNA_H-paniculata_contig21103.5516.1 vs. uniprot
Match: B8BYD7_THAPS (Leucine--tRNA ligase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYD7_THAPS)

HSP 1 Score: 129 bits (323), Expect = 1.320e-32
Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 0
Query:    1 KGAKTKLVAKTGGATVRQWDIMKMMVPEDEIPRFTDPLVWLQYFPPRGRKDVTKFGTAVDWRRSFVTTSVNPFYDSFIRWQFNTLKAR 88
            KG KTKLV KTG   VRQW+I+K MVPE+EIP F DP+ WL+YFPP G + + +FG+ VDWRRSF+TT+VN +YD+FIRWQFN L+ +
Sbjct:  157 KGGKTKLVQKTGTGIVRQWNILKRMVPEEEIPEFADPIHWLKYFPPIGVEHMKRFGSGVDWRRSFITTAVNGYYDAFIRWQFNVLREK 244          
BLAST of mRNA_H-paniculata_contig21103.5516.1 vs. uniprot
Match: A0A7S2UVZ9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVZ9_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.940e-32
Identity = 55/79 (69.62%), Postives = 66/79 (83.54%), Query Frame = 0
Query:   16 VRQWDIMKMMVPEDEIPRFTDPLVWLQYFPPRGRKDVTKFGTAVDWRRSFVTTSVNPFYDSFIRWQFNTL-KARTVQYG 93
            VRQW+I+KMMVP+DEIP F DPL WL+YFPP G +D+  FGT VDWRRSF+TTS NP+YD+F+RWQFNTL K   VQ+G
Sbjct:    3 VRQWNILKMMVPQDEIPAFVDPLKWLEYFPPYGMQDLKGFGTGVDWRRSFITTSANPYYDAFVRWQFNTLRKGDRVQFG 81          
BLAST of mRNA_H-paniculata_contig21103.5516.1 vs. uniprot
Match: A0A6U2REQ0_9STRA (Leucine--tRNA ligase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2REQ0_9STRA)

HSP 1 Score: 127 bits (320), Expect = 3.360e-32
Identity = 58/88 (65.91%), Postives = 68/88 (77.27%), Query Frame = 0
Query:    1 KGAKTKLVAKTGGATVRQWDIMKMMVPEDEIPRFTDPLVWLQYFPPRGRKDVTKFGTAVDWRRSFVTTSVNPFYDSFIRWQFNTLKAR 88
            KG KTKLVAKTG   VRQW+I+K MVPE+ I  F DP  WL YFPP G   + KFG  VDWRRSF+TT+VNP+YD+FIRWQFNTL+ +
Sbjct:  160 KGGKTKLVAKTGTGIVRQWNILKKMVPEEIIGEFVDPNKWLSYFPPIGVDHLKKFGAGVDWRRSFITTAVNPYYDAFIRWQFNTLRKK 247          
BLAST of mRNA_H-paniculata_contig21103.5516.1 vs. uniprot
Match: K0SYU8_THAOC (tRNA-synt_1 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SYU8_THAOC)

HSP 1 Score: 125 bits (314), Expect = 6.160e-32
Identity = 54/88 (61.36%), Postives = 71/88 (80.68%), Query Frame = 0
Query:    1 KGAKTKLVAKTGGATVRQWDIMKMMVPEDEIPRFTDPLVWLQYFPPRGRKDVTKFGTAVDWRRSFVTTSVNPFYDSFIRWQFNTLKAR 88
            KG KTKLV KTG   VRQW+I+K MVP +EIP+F DP+ WL+YFPP G + + +FG+ VDWRR+F+TT+VN +YD+FIRWQFN L+ +
Sbjct:   44 KGGKTKLVQKTGTGIVRQWNILKRMVPVEEIPQFADPIHWLKYFPPIGIEHMKRFGSGVDWRRAFITTNVNGYYDAFIRWQFNVLREK 131          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21103.5516.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTL8_ECTSI3.780e-4587.36Leucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835YRC2_9STRA1.650e-4170.19Leucine--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
A0A7S0GHA7_9STRA3.380e-3564.77Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A7R9UHB7_9STRA6.710e-3568.09Leucine--tRNA ligase n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A1E7EQY5_9STRA1.250e-3465.96Leucine--tRNA ligase n=1 Tax=Fragilariopsis cylind... [more]
A0A7S2PN01_9STRA2.800e-3362.50Leucine--tRNA ligase (Fragment) n=1 Tax=Skeletonem... [more]
B8BYD7_THAPS1.320e-3263.64Leucine--tRNA ligase n=1 Tax=Thalassiosira pseudon... [more]
A0A7S2UVZ9_9STRA1.940e-3269.62Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa... [more]
A0A6U2REQ0_9STRA3.360e-3265.91Leucine--tRNA ligase n=1 Tax=Leptocylindrus danicu... [more]
K0SYU8_THAOC6.160e-3261.36tRNA-synt_1 domain-containing protein n=1 Tax=Thal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 18..88
e-value: 1.7E-22
score: 81.2
IPR004493Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolicPANTHERPTHR45794Leucyl-tRNA synthetasecoord: 1..88
NoneNo IPR availablePANTHERPTHR45794:SF1LEUCINE--TRNA LIGASE, CYTOPLASMICcoord: 1..88
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 27..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21103contigH-paniculata_contig21103:3160..3649 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21103.5516.1mRNA_H-paniculata_contig21103.5516.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21103 3160..3649 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21103.5516.1 ID=prot_H-paniculata_contig21103.5516.1|Name=mRNA_H-paniculata_contig21103.5516.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=97bp
KGAKTKLVAKTGGATVRQWDIMKMMVPEDEIPRFTDPLVWLQYFPPRGRK
DVTKFGTAVDWRRSFVTTSVNPFYDSFIRWQFNTLKARTVQYGTVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014729Rossmann-like_a/b/a_fold
IPR004493Leu-tRNA-synth_Ia_arc/euk