prot_H-paniculata_contig2102.5487.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2102.5487.1
Unique Nameprot_H-paniculata_contig2102.5487.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length524
Homology
BLAST of mRNA_H-paniculata_contig2102.5487.1 vs. uniprot
Match: D7FU19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU19_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 1.230e-48
Identity = 108/190 (56.84%), Postives = 130/190 (68.42%), Query Frame = 0
Query:    3 VIYTCVFAMAPLR----QRGQQRGA-----PPDMLSGGGREILASYTAFRYQGNFSDVACRLIDTLPYQSPAMQRGRKRLVTPKGGRRDRTGSG--TDNTTAGPAPEEVRCVSGEHVCYLATTPELATICVTDGLPLDEEAFRYLRVVDSTVSAAMAPLARK-EAEKVRRAASLALVESMNTWTSQSNGG 180
            +I+T V ++AP +    ++G+QR A     P D LSGG RE+LASYTAF YQGNFSDV CRL+DTLP+QSPA   GRKRL       RDR G G  TD        E VR   G+HV YL  T EL  +CVTDG+P+D+E F YL +V+  VS+A+APL R  +AE VRRAASLALVESMNTWTSQ +GG
Sbjct:    2 LIHTAVASLAPRQAMRHRKGRQRKAVSLTPPSDFLSGGDREVLASYTAFSYQGNFSDVVCRLMDTLPHQSPASGMGRKRLG------RDRAGGGSRTDGGGGLTGIERVRHHDGDHVFYLYVTAELGILCVTDGIPVDQEVFAYLALVEEAVSSAVAPLRRAADAETVRRAASLALVESMNTWTSQVDGG 185          
BLAST of mRNA_H-paniculata_contig2102.5487.1 vs. uniprot
Match: A0A6H5KR82_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR82_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 3.980e-48
Identity = 142/314 (45.22%), Postives = 176/314 (56.05%), Query Frame = 0
Query:    3 VIYTCVFAMAP---LRQR-GQQRGA-----PPDMLSGGGREILASYTAFRYQGNFSDVACRLIDTLPYQSPAMQRGRKRLVTPKGGRRDRTGSGTDNTTAGPAPEEVRCVSGEHVCYLATTPELATICVTDGLPLDEEAFRYLRVVDSTVSAAMAPLARK-EAEKVRRAASLALVESMNTWTSQSNGGSLGTS---------------SGNGVHWNSSASSGPSSRAALESYLAEAVRQLRVDRVEPTRPSALLMTGVVGD-----------------AVQTPTSNASTAKQRSPRSGRPSLRGPLSPGPRGRI 274
            +I+T V ++AP   +RQR G+QR A     P D LSGG RE+LASYTAF YQGNFSDVACRLIDTLP+QSP+   GRKRL   + G   RT  G   T      E VR   G+HV YL  T EL  +CVTDG+P+D+E F YL +V+  VS+A+APL R  + E VRRAA LALVESMNTWTSQ++GG   +                S + +  ++S S    S+  LE  L EAVR+L ++RVE +        G  G                  A+Q P     T K R P    PS RGPLSPG  G +
Sbjct:    2 LIHTAVASLAPRQAMRQRKGRQRKAVSLTPPSDFLSGGDREVLASYTAFSYQGNFSDVACRLIDTLPHQSPSSGMGRKRLGRDRAGGESRTDGGGGLTGV----ERVRHHDGDHVFYLYVTAELGILCVTDGIPIDQEVFGYLALVEKAVSSAVAPLRRAADVEAVRRAAKLALVESMNTWTSQADGGGRASPDSRSSPTPTRSTTPISEDSLRSSTSRSPDLESQKTLERCLIEAVRRLHIERVETSLACLQQQAGENGGXXXXXXXXXXXXGSPNRALQPP---LLTPKARRPTL--PSPRGPLSPGVHGLL 306          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2102.5487.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FU19_ECTSI1.230e-4856.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KR82_9PHAE3.980e-4845.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2102contigH-paniculata_contig2102:7103..14247 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2102.5487.1mRNA_H-paniculata_contig2102.5487.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2102 6067..14462 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2102.5487.1 ID=prot_H-paniculata_contig2102.5487.1|Name=mRNA_H-paniculata_contig2102.5487.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=524bp
MTVIYTCVFAMAPLRQRGQQRGAPPDMLSGGGREILASYTAFRYQGNFSD
VACRLIDTLPYQSPAMQRGRKRLVTPKGGRRDRTGSGTDNTTAGPAPEEV
RCVSGEHVCYLATTPELATICVTDGLPLDEEAFRYLRVVDSTVSAAMAPL
ARKEAEKVRRAASLALVESMNTWTSQSNGGSLGTSSGNGVHWNSSASSGP
SSRAALESYLAEAVRQLRVDRVEPTRPSALLMTGVVGDAVQTPTSNASTA
KQRSPRSGRPSLRGPLSPGPRGRIGSGGEGSGGVGNSDEKPPLELRGWSE
HGQGAIPSPPTPTSPSSKLLSAARRYLPFGDGGVWGAGTIHTSYSAGITD
PGRLYSGLGDGETFNRTSRRSSVPARPVHSPPTPAAAQEFLSFGEAASNG
VADHVSPSAAAAAAIGERSAHVMGPHPRDCQGRLSLGHPTQRRMFSGLDR
GTSMLPPKPGGCDVLPSPEPQHTPTHHFGPASGLPGRRRHRHRHRHHHYQ
HRLVPWVELLVSLCPRIQRCLLP*
back to top