prot_H-paniculata_contig2100.5483.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2100.5483.1
Unique Nameprot_H-paniculata_contig2100.5483.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length412
Homology
BLAST of mRNA_H-paniculata_contig2100.5483.1 vs. uniprot
Match: D7FKB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKB5_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 8.170e-32
Identity = 128/312 (41.03%), Postives = 161/312 (51.60%), Query Frame = 0
Query:    1 RCASPSLDIRLPDSLAGLTT--GRRNNTGHNANRGEAHGHARTITTRGPLITEISSPSPREKATSDEEGGSGRVGTRKQGAAERHSNS--GGDQGLARKPKKKGGAGAGAGNRQPVVTKGFLNKLGGGGKGKESVTPLYPPTGSENGAEPGGFAKLMGRCKVVDTSSMNKDQIDAAMRAHAGGSKSLNSKAATGSSSL----ASSSKGKTTAGSRPAVRKGFLESGGGNS-LYGEEGSREGGGGLGRKGKNIDREFERLVTEADPDMVN----QKSEQKISDPLAEQLAQLATILGPGSSFPGTQRGSSSAS 299
            R AS + DI LP +LAGL +  G R  T +  N G           RGPLI+EI      + +T+    G G    R+     R  +   G + G+ RK  KK           PVV KGFL+    GGK      PLYPP GSENGAEP  +AKLM RCKVVDT   +K+++DAAM+AHAGG   L   + T          +   G+  A S  AV+KGFL +G G   + GEEG   G    GR  K +DRE+ERLV  ADP+M +    + S     DP+ EQLAQLA ILGP +  P T  G   A+
Sbjct:  369 RNASATRDILLPGALAGLASDSGDRKRTENGLNEGR----------RGPLISEIVP----DTSTTTARAGDGGEALRQVSDDSRAVDGCQGQEPGVERKVGKKSA---------PVVKKGFLSSFKVGGKAGLERAPLYPPGGSENGAEPSAYAKLMSRCKVVDTRDHSKEEMDAAMKAHAGGGAPLRPASQTPEPXXXXXXTAGRAGRKPAASA-AVKKGFLGAGVGRGRIKGEEGGGRGDA-RGRSSK-VDREYERLVALADPEMGDGTGGKPSHGGEEDPMTEQLAQLAKILGPAAPLPETPFGPGCAT 654          
BLAST of mRNA_H-paniculata_contig2100.5483.1 vs. uniprot
Match: A0A6H5KE96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE96_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 1.140e-27
Identity = 123/313 (39.30%), Postives = 156/313 (49.84%), Query Frame = 0
Query:    3 ASPSLDIRLPDSLAGLTT--GRRNNTGHNANRGEAHGHARTITTRGPLITEI----SSPSPREKATSDEEGGSGRVGTRKQGAAERHSNSGGDQGLARKPKKKGGAGAGAGNRQPVVTKGFLNKLG-GGGKGKESVTPLYPPTGSENGAEPGGFAKLMGRCKVVDTSSMNKDQIDAAMRAHAGGSKSLNSKAATGSSS-----LASSSKGKTTAGSRPAVRKGFLESGGGNSLYGEEGSREGGGGLGRKGKNIDREFERLVTEADPDMVN----QKSEQKISDPLAEQLAQLATILGPGSSFPGTQRGSSSAS 299
            A  + DI LP +LAGL +  G R    +  N G           RGPLI+EI    S+P+P           +G  G      ++      G  G     K+K G     G   PVV KGFL+    GGGKG+E   PLYPP GSENGAEP  +AKLM RCKVVDT   +K+++DAAM+AHAGG   L   + T  S       A  ++ K  A +  AV+K F  +G G      E         GR  K +DRE+ERLV  ADP+M +    + S     DP+ EQLAQLA ILGP +  P T  G   A+
Sbjct:  317 ALATRDILLPGALAGLASDSGDRKRRENRLNEGR----------RGPLISEIVPDTSTPAP-----------AGDEGEALSHVSDNSKVFDGCPGQEPGAKRKVG-----GKSAPVVKKGFLSSSKVGGGKGRERA-PLYPPGGSENGAEPSAYAKLMSRCKVVDTRDHSKEEVDAAMKAHAGGGAPLRPASQTPESKPSPTPTAGCARRKPAASA--AVKKRFHGAGNGRGEVKGEXXXXXXXXRGRSSK-VDREYERLVALADPEMGDGAGGKSSHGGEDDPMTEQLAQLAKILGPAAPLPETPLGPGCAT 599          
BLAST of mRNA_H-paniculata_contig2100.5483.1 vs. uniprot
Match: A0A8J2X7L2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X7L2_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.930e-5
Identity = 57/183 (31.15%), Postives = 87/183 (47.54%), Query Frame = 0
Query:  109 RQPVVTKGFLNKLGGGGKGKESVTPLYPPTGSENGA--EPGGFAKLMGRCKVVDTSSMNKDQIDAAMRAHAGGSKSLNSKAATGSSSL---ASSSKGKTTAGSRPA--------VRKGFLESGGGNSLYGEEGSREGGGGLGRKGKNIDREFERLVTEADPDMVNQKSEQKISDPLAEQLAQL 278
            ++P V KGFL         K     LYP +GSE G   + G +++ M +CKVVDT++M+K+++DAA R +AG          TG+ S    A     K T    PA         +KGFL S   +SLY E  S+       ++    + EF+  + E DP+  N    + + +   + +AQL
Sbjct:  351 KKPAVKKGFLRTA------KARKAALYP-SGSEQGESQKEGTYSRFMSKCKVVDTTTMSKEEVDAATRQYAG----------TGTVSQPPQAPPLPSKNTTAKPPAPPSKAFDGAKKGFLNSSK-SSLYDENESK-------KRTPEYEPEFDAAMAELDPEFSNAHKNEDVGNDEDDTIAQL 508          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2100.5483.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FKB5_ECTSI8.170e-3241.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KE96_9PHAE1.140e-2739.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J2X7L2_9STRA1.930e-531.15Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2100contigH-paniculata_contig2100:389..2934 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2100.5483.1mRNA_H-paniculata_contig2100.5483.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2100 389..2935 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2100.5483.1 ID=prot_H-paniculata_contig2100.5483.1|Name=mRNA_H-paniculata_contig2100.5483.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=412bp
RCASPSLDIRLPDSLAGLTTGRRNNTGHNANRGEAHGHARTITTRGPLIT
EISSPSPREKATSDEEGGSGRVGTRKQGAAERHSNSGGDQGLARKPKKKG
GAGAGAGNRQPVVTKGFLNKLGGGGKGKESVTPLYPPTGSENGAEPGGFA
KLMGRCKVVDTSSMNKDQIDAAMRAHAGGSKSLNSKAATGSSSLASSSKG
KTTAGSRPAVRKGFLESGGGNSLYGEEGSREGGGGLGRKGKNIDREFERL
VTEADPDMVNQKSEQKISDPLAEQLAQLATILGPGSSFPGTQRGSSSASG
SSSSPSPAESAPSKVKPSTATTNSATETAVKPLVVNGTKSETSNAAVIAP
TSTIVDGACSPRGENGANPTNRTKSCTENNPGTGVSGMLEKDRSPTTTST
LTCFAPGDEATP
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