prot_H-paniculata_contig210.5480.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig210.5480.1
Unique Nameprot_H-paniculata_contig210.5480.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1044
Homology
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BLAST of mRNA_H-paniculata_contig210.5480.1 vs. uniprot
Match: A0A6H5L8R5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8R5_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 5.280e-13
Identity = 53/148 (35.81%), Postives = 79/148 (53.38%), Query Frame = 0 
Query:  622 AATALFPLAASSN------WKHVNPSLHSTVVSMVGHDPYDSLLVIEQLLAWEKAPSNAMCEAVVSALLYSRSSARTQCLQRQLQAMLTASPECWRPPT--NGPSWFEGVMVGLTTNVIRGDAYSGQPPSPEKLEAHVIVLELVIKFL 761
            AA A  P A  SN         ++  +  T+ + V   P  ++ V+++ LA   AP +++C  +VS+LL SR   R++CL+ QL+AML   P  W PP   + P W E +M G+        A    PPS + L AH IVLELV+++L
Sbjct:  616 AAAAASPPAEQSNPTEARALTRMDDHVRLTLNTFVKCAPETTVAVVKEFLALGTAPPSSLCGTIVSSLLESRCRVRSECLRMQLRAMLDVDPNVWSPPDEDDAPGWLENLM-GIILTDPPAAAKRRDPPSDQVLGAHAIVLELVVEYL 762
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BLAST of mRNA_H-paniculata_contig210.5480.1 vs. uniprot
Match: D8LSY6_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSY6_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 3.150e-12
Identity = 45/119 (37.82%), Postives = 70/119 (58.82%), Query Frame = 0 
Query:  645 TVVSMVGHDPYDSLLVIEQLLAWEKAPSNAMCEAVVSALLYSRSSARTQCLQRQLQAMLTASPECWRPPT--NGPSWFEGVMVGLTTNVIRGDAYSGQPPSPEKLEAHVIVLELVIKFL 761
            T+ + V + P  ++ ++++ LA   AP +++C  +VS+LL SR   R++CL+ QL+AML   P  W PP   + P W E +M  + T+     A    PPS + L AH IVLELV+ +L
Sbjct:  547 TLNTFVKYAPETTVAIVKEFLALGTAPPSSLCGTIVSSLLESRCRIRSECLRLQLRAMLDVDPNVWSPPDKDDAPGWLENLMGVILTDPP-AVAKRRDPPSDQVLGAHAIVLELVVDYL 664
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig210.5480.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L8R5_9PHAE5.280e-1335.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSY6_ECTSI3.150e-1237.82Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig210contigH-paniculata_contig210:11661..16507 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig210.5480.1mRNA_H-paniculata_contig210.5480.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig210 11620..16977 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig210.5480.1 ID=prot_H-paniculata_contig210.5480.1|Name=mRNA_H-paniculata_contig210.5480.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1044bp
MPVSIMDSESSHSQGRQKKKSQQTQLLPHHDDLNSSSDVKFSNFSLLPCR
TVATCEGGGLNRTDIPLAHGENVVGRLPVGEGVVGCNKLRRDLGIPADAK
GVHDKHVILQTSNVPAGTVLLRAFGTVRIQGRPVSNRSGQTPTKPAKNTT
PTENEVQKGAASYFAATATTASAPVVAIRSPMKSPPPRIVRPRDQCYLVV
GETLELDAKNAEPAYSYILTSCTTPIPRSSSMQMSPGIVGGGGGAHWLVR
SKGNKRPRNPLAAIDLESLQSAMFSVSSEPQPAQERLGGRRAPMEIKSTP
PRAVSMLGSQHRREGTKRRLHLGSAWQGADPLTVKPTIVVLDDSDEETNS
PAGQQSRLNEPSRTARGTAAAAAAPSGARAVDSRHSCLHKRRRDRSRSRS
SDNIPFKPSMLVDLTSDYGTKGLPVGACSVQPLDLCGSDGEDPGGASGSG
GKGPAATQMAAAALSERPESQSEKIIGWTSSPAPPMPSMTLEPNAATLSS
KYLETPLTQSVLEDSVDVEEKEDLRTKRVETKQMIEMPITVDSLTTTKKE
KSAGATDIFPSARRQHTELQSNGPVVHADWHRSLLVPTAAIPLKNIMTTM
VNKCDFQTKLPVVSRRSRYGPAATALFPLAASSNWKHVNPSLHSTVVSMV
GHDPYDSLLVIEQLLAWEKAPSNAMCEAVVSALLYSRSSARTQCLQRQLQ
AMLTASPECWRPPTNGPSWFEGVMVGLTTNVIRGDAYSGQPPSPEKLEAH
VIVLELVIKFLVESCRRHHHCRSRPGAAGKGDREQASPAAAAAAVIVSGT
SHVDTLSQLFDWTPPERTTKASLEVRAAAAARRAVKRCTAWAVESNRGYS
SLVPAECSKNGDAAACFPRCNNGGRELGQEEREIKKLSIQSEGDVDALSK
AQAAAGILTARLLAEVVETCGLPTATACEMIRDEMMNCYSSRRNGGSDSS
ATAAMGSSSWFGCRPDAAAGRVLEAAACCNLVRALAGRGFTVTLTRLLLA
EMQKGGVVVGGAEDKRRLQLLLMRQADDGGGVGLVERFAVLRF*
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