prot_H-paniculata_contig20866.5430.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20866.5430.1
Unique Nameprot_H-paniculata_contig20866.5430.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length155
Homology
BLAST of mRNA_H-paniculata_contig20866.5430.1 vs. uniprot
Match: D7FVH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVH8_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 6.380e-48
Identity = 89/164 (54.27%), Postives = 116/164 (70.73%), Query Frame = 0
Query:    1 RNSFGPSYVFANVRTSVGKMLANFLQE---------KMKGGGRKGDEAKADEEMVLTSAVVENGVSELGGFGGTVVLPKPGVGTSIGETLEAPEEPRGVFDAVENNQVAVTEYKMPPKEPHVCKMLPGVQLMERTLLPEDLAPRRAPRLNRHMSIAEMGENKFD 155
            RNSFGPSY+F NVRTS+GK ++ F++E         ++KG   KG E   D E  L + V E+G +E GGFGG + LP P + T++GETL+APE+PRG+F+ V NNQV +  Y MPPK  HVC+MLPGV  + +TLLP+DL  RR PRLNR+MSIAEMG  K++
Sbjct:    5 RNSFGPSYLFTNVRTSLGKAVSAFVKEGAGGKAGGVEVKGLDSKG-EGLEDGETRLCTEVQEDGSTEWGGFGGKLALPAPEISTAVGETLQAPEKPRGMFEDVANNQVVMAVYAMPPKGEHVCRMLPGVDALPKTLLPQDLVSRRPPRLNRNMSIAEMGSTKYN 167          
BLAST of mRNA_H-paniculata_contig20866.5430.1 vs. uniprot
Match: A0A6H5JF35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF35_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 9.430e-46
Identity = 89/163 (54.60%), Postives = 120/163 (73.62%), Query Frame = 0
Query:    1 RNSFGPSYVFANVRTSVGKMLANFLQEKMKG--GGR--KGDEAKADE----EMVLTSAVVENGVSELGGFGGTVVLPKPGVGTSIGETLEAPEEPRGVFDAVENNQVAVTEYKMPPKEPHVCKMLPGVQLMERTLLPEDLAPRRAPRLNRHMSIAEMGENKFD 155
            RNSFGPSY+FANVRT +GK ++ F++E   G  GG   KG ++KA+     E  L + V E+G +E GGFGG + +P P + T++G+TL+APE+PRG+F+ V NNQVA+  Y MPPK  HVC+MLPGV+ + +TLLP+DL  RR PRLNR+MSIAEMG  K++
Sbjct:  880 RNSFGPSYLFANVRTPLGKAVSAFVKEGAGGTAGGVEVKGLDSKAEGLEAGEARLCTEVQEDGSTEWGGFGGKLAIPNPEISTAVGDTLQAPEKPRGMFEDVANNQVAMAVYAMPPKGEHVCRMLPGVEALPKTLLPQDLVSRRPPRLNRNMSIAEMGSTKYN 1042          
BLAST of mRNA_H-paniculata_contig20866.5430.1 vs. uniprot
Match: A0A835YKU1_9STRA (XRN 5'-3' exonuclease N-terminus-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKU1_9STRA)

HSP 1 Score: 110 bits (274), Expect = 5.070e-25
Identity = 70/156 (44.87%), Postives = 86/156 (55.13%), Query Frame = 0
Query:    1 RNSFGPSYVFANVRTSVGKMLANFLQEKMKGGGRK--GDEAKADEEMVLTSAVVENGVSELGGFGGTVVLPKPGVGTS----IGETLEAPEEPRGVFDAVENNQVAVTEYKMPPKEPHVCKMLPGVQLMERTLLPEDLAPRRAPRLNRHMSIAEMG 150
            RNSFGPSY+F +  + + + +    Q    G G+K  GD  +A               SE  G+ GTV   KP  G      +G+ L APE P G  + V+NNQV   EY+MPP+ PHVC MLPGV      L PEDL PRR PRLNR MSIAE+G
Sbjct: 1598 RNSFGPSYIFVHSTSHLSQRIMGVYQA---GNGKKSKGDFLRA---------------SEFEGWSGTV---KPAKGADARQQLGKPLPAPERPEGALEGVKNNQVLCAEYEMPPRMPHVCAMLPGVDPPAIELGPEDLTPRRPPRLNRGMSIAELG 1732          
BLAST of mRNA_H-paniculata_contig20866.5430.1 vs. uniprot
Match: A0A7S3UTW4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTW4_HETAK)

HSP 1 Score: 77.8 bits (190), Expect = 6.690e-14
Identity = 50/155 (32.26%), Postives = 77/155 (49.68%), Query Frame = 0
Query:    1 RNSFGPSYVFANVRTSVGKMLANFLQEKMKGGGRKGDEAKADEEMVLTSAVVENGVSELGGFGGTVVLPKPGVGTSIGETLEAPEEPRGVFDAVENNQVAVTEYKMPPKEPHVCKMLPGVQLMERTLLPEDLAPRRAPRLNRH-MSIAEMGENKF 154
            RNS+GP Y+F +      + +    ++              DE   L     E+    L GF       +P +  ++ E +EAP++P G  + +  N++A  EY +PP  PH+C++L G +     L P+DL PRR PRL+R  MSIAE+G   F
Sbjct:  209 RNSYGPGYLFVHSSHPGFQDILKCYEQ--------------DETRALEGGKFES----LTGF--VTKSTQPEMAIAMNEPVEAPKQPPGALEDIRANELAAVEYALPPAGPHLCRLLDGAEAPASPLTPQDLLPRRPPRLSRGGMSIAELGGAPF 343          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20866.5430.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FVH8_ECTSI6.380e-4854.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF35_9PHAE9.430e-4654.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YKU1_9STRA5.070e-2544.87XRN 5'-3' exonuclease N-terminus-domain-containing... [more]
A0A7S3UTW4_HETAK6.690e-1432.26Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20866contigH-paniculata_contig20866:191..4170 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20866.5430.1mRNA_H-paniculata_contig20866.5430.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20866 191..4170 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20866.5430.1 ID=prot_H-paniculata_contig20866.5430.1|Name=mRNA_H-paniculata_contig20866.5430.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=155bp
RNSFGPSYVFANVRTSVGKMLANFLQEKMKGGGRKGDEAKADEEMVLTSA
VVENGVSELGGFGGTVVLPKPGVGTSIGETLEAPEEPRGVFDAVENNQVA
VTEYKMPPKEPHVCKMLPGVQLMERTLLPEDLAPRRAPRLNRHMSIAEMG
ENKFD
back to top