prot_H-paniculata_contig2077.5398.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2077.5398.1
Unique Nameprot_H-paniculata_contig2077.5398.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length491
Homology
BLAST of mRNA_H-paniculata_contig2077.5398.1 vs. uniprot
Match: A0A6H5JCP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCP3_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 1.610e-46
Identity = 118/269 (43.87%), Postives = 151/269 (56.13%), Query Frame = 0
Query:  203 PPSPGSSVGPDTVHRLRVLLNTERSRRMAAESVLGRRTESTSAEKQSFRTSLRRFPGPQAIEAHALEASANAARWAQSATALAGHSQPELPGLICRLLSEVFTTCDAEVKTRLAARVEGLKAFVCE-EHVALG------------------------LSDGTMAGDTQDLLYSELRKRFQSIPFIGRAKLVNMSRAVLTRALTTEDQKEIARKLLNQTWPTFEPVIKSYLALFVECALQRPAVEFEATIGNEEPFDATQHRELARFLEP 446
            P SP S+VG D + RLR LL+TERSRRMAAE+ L     S S    S R+ +    G    +A  L +S    + ++         Q  L  ++  +L  +F  C  EV+ RL  RV+GL+AFV E E V LG                           G MA DT +LLY ELR+R ++I  +GR  LV +S  VL+RAL TE +KEI R L++QTWPTFEPV++SYLALFVECALQ P +EF+   G EEPFD  +HR LA F  P
Sbjct:  230 PLSPASTVGQDDIQRLRSLLDTERSRRMAAETALSVGGGSVS----SRRSGMCGGDGSGETKAEQLYSSLGQPQQSRE------QKQKMLLSVVTSILVHLFHCCRVEVRRRLRVRVDGLRAFVGEAEFVQLGSIVSGPGTGGPKASLAAAAGAAGATPGGVMAQDTHELLYGELRRRHRTIAGLGRKDLVTLSARVLSRALKTEAKKEIGRMLVHQTWPTFEPVVRSYLALFVECALQEPQIEFDEAAGKEEPFDPEKHRPLASFSAP 488          
BLAST of mRNA_H-paniculata_contig2077.5398.1 vs. uniprot
Match: D8LEG1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEG1_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 1.020e-32
Identity = 63/104 (60.58%), Postives = 79/104 (75.96%), Query Frame = 0
Query:  340 MAGDTQDLLYSELRKRFQSIPFIGRAKLVNMSRAVLTRALTTEDQKEIARKLLNQTWPTFEPVIKSYLALFVECALQRPAVEFEATIGNEEPFDATQHRELARF 443
            MA DT +LLY ELR+R ++I  +GR  LV +S  VL+RAL TE +KE+ R L++QTWPTFEPV++SYLALFVECALQ P +EF+   G EEPFD  +HR LA F
Sbjct:    1 MAQDTHELLYGELRRRHRTIAGLGRKDLVTLSARVLSRALKTEAKKEVGRMLVHQTWPTFEPVVRSYLALFVECALQEPQIEFDEAAGKEEPFDPEKHRPLASF 104          
BLAST of mRNA_H-paniculata_contig2077.5398.1 vs. uniprot
Match: A0A6H5KFA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFA2_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 2.670e-24
Identity = 87/263 (33.08%), Postives = 133/263 (50.57%), Query Frame = 0
Query:  203 PPSPGSSVGPDT-----VHRLRVLLNTERSRRMAAESVLGRRTESTSAEKQSFRTSLRRFPGPQAIEAHALEASANAARWAQSATALAGHSQPELPGLICRLLSEVFTTCDAEVKTRLAARVEGLKAFVCEEHVALGLSDGTMAGDTQDLLYSELRKRFQSIPFIGRAKLVNMSRAVLTRALTTEDQKEIARKLLNQTWPTFEPVIKSYLALFVECALQRPAVEFEATIGNEEPFDATQHRELARFLE-PEGNIVFVVFPALK 459
            PP+P S+   D      + RLR  L TE SRR+ AE+++ R      A+    R+    FP  + +  H  + + +A  W + A A+ G S P + G I  +L   F  C  EV+  L  R++ L AF+  +   L  +   M  DTQ +LY  L K +Q I      ++  ++  VL R     D+      +    WP+FE ++K+YL +FVE ALQ+P VEFE  +G+   FD+  HR+ A + + P G    +VFPAL+
Sbjct:   77 PPTPPSAGRRDANTEVELGRLRRDLETEHSRRVKAETLVHR------AKGGGLRSGD--FPSVRDVYQHVYQLADDALAWTEKACAVGG-SHPAVNGTILSVLYNTFLVCREEVQRCLDERLQNLSAFLGNDEPILLSAGDEMNLDTQYVLYECLCKDYQRIVPADPDRMNALAGVVLRRCEEPADESLANEIISGPAWPSFEALMKNYLMVFVEMALQKPRVEFEDNLGDAVTFDSVVHRDWAPYSKAPAGQSCSIVFPALR 330          
BLAST of mRNA_H-paniculata_contig2077.5398.1 vs. uniprot
Match: D7FSP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP0_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 3.410e-23
Identity = 86/265 (32.45%), Postives = 134/265 (50.57%), Query Frame = 0
Query:  217 RLRVLLNTERSRRMAAESVLGRRTESTSAEKQSFRTSLRRFPGPQAIEAHALEASANAARWAQSATALAGHSQPELPGLICRLLSEVFTTCDAEVKTRLAARVEGLKAFVCEEHVALGLSDGTMAGDTQDLLYSELRKRFQSIPFIGRAKLVNMSRAVLTRALTTEDQKEIARKLLNQTWPTFEPVIKSYLALFVECALQRPAVEFEATIGNEEPFDATQHRELARFLE-PEGNIVFVVFPALKASRMWRYEDGSRSDVLRDGVI 480
            RLR  L TE +RR+ AE+++ R      A+    R+    FP  + +  H  + + +A  W + A A+ G S P L G +  +L   F  C  EV+  L  R++ L AF+  +   L  +   M  DTQ +LY  L K +Q I      ++  ++  VL R     D+      L   TWP+FE ++K+YL +FVE ALQ+P VEFE  +G+   FD+  HR+ A + + P G    +VFPA+      R ++G  +   + GV+
Sbjct:  266 RLRRDLETEHTRRVKAETLVHR------AKGGGLRSGD--FPSVRDVYQHVYQLADDALAWTEKACAVGG-SHPALNGTVLSVLYNTFLVCREEVQRCLDERLQNLSAFLGNDEPILLSAGDEMNLDTQYVLYECLCKDYQRIVPADPDRMDALAGVVLQRCGEPADRSLANEILSGATWPSFEALMKNYLLVFVEMALQKPRVEFEDNLGDAMTFDSIIHRDWAPYSKAPAGQSCSIVFPAI------RPQEGRPTSNAKIGVV 515          
BLAST of mRNA_H-paniculata_contig2077.5398.1 vs. uniprot
Match: D7FSP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP1_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 9.900e-17
Identity = 71/246 (28.86%), Postives = 121/246 (49.19%), Query Frame = 0
Query:  215 VHRLRVLLNTERSRRMAAESVLGRRTESTSAEKQSFRTSLRRFPGPQAIEAHALEASANAARWAQSATALAGHSQPELPGLICRLLSEVFTTCDAEVKTRLAARVEGLKAFVCEEHVALGLSDGTMAGDTQDLLYSELRKRFQSIPFIGRAKLVNMSRAVLTRALTTEDQKEIARKLLNQTWPTFEPVIKSYLALFVECALQRPAVEFEATIGNEEPFDATQHRELARFLE-PEGNIVFVVFPALK 459
            V RLR  L+TE +RR+ AE+++ R +          R  +  FP    +  H    + +A  W + A A+ G  Q    G    +L   F  C  EV+  L  R++ L AF+      L  +    + D Q +LY  L +++++I      ++  ++R +L R     D+          TWP+FE ++K+YL +FVE ALQ+P ++FE ++G+   FD  +H +LA +   P      +VFP+++
Sbjct:  118 VGRLRRDLDTEHTRRVNAETLIHRSSGG------GLRPGV--FPSVGDVYQHVGHLADDALAWTEKAFAVGGSRQTWY-GTTRSVLYNTFLVCREEVQRCLDERLQILSAFLGNAEPILLSAGDEKSLDPQYVLYECLCRKYRTIVSTEPDRMDELARLILQRCGEPADRGLANEITSGATWPSFEALMKNYLLVFVEMALQKPGIDFEDSLGDNVAFDPAEHCDLAPYSRAPTAQHCSIVFPSIR 354          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2077.5398.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JCP3_9PHAE1.610e-4643.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEG1_ECTSI1.020e-3260.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFA2_9PHAE2.670e-2433.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSP0_ECTSI3.410e-2332.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FSP1_ECTSI9.900e-1728.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 22..45
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 46..490
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2077contigH-paniculata_contig2077:5568..17453 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2077.5398.1mRNA_H-paniculata_contig2077.5398.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2077 3008..17788 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2077.5398.1 ID=prot_H-paniculata_contig2077.5398.1|Name=mRNA_H-paniculata_contig2077.5398.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=491bp
MESECITDSSCCYTDDSGAGTLMIVCFCLASTLLLMSVALMWLLLTSISG
RCSRAGKIGHGRKDQTVHGDEGSSHPSNPIGFSGDTGISDKGPTRRASAT
TRSGSPDCEEALSLQNMEKGNPAPVKRMRSTNASAVGAQSVGMDANKNDD
NANSNAYGNGNARDDRTAARSVTRDTESKSLRDLDDALKPDLIRRNSWSA
LVPPSPGSSVGPDTVHRLRVLLNTERSRRMAAESVLGRRTESTSAEKQSF
RTSLRRFPGPQAIEAHALEASANAARWAQSATALAGHSQPELPGLICRLL
SEVFTTCDAEVKTRLAARVEGLKAFVCEEHVALGLSDGTMAGDTQDLLYS
ELRKRFQSIPFIGRAKLVNMSRAVLTRALTTEDQKEIARKLLNQTWPTFE
PVIKSYLALFVECALQRPAVEFEATIGNEEPFDATQHRELARFLEPEGNI
VFVVFPALKASRMWRYEDGSRSDVLRDGVITWSTSNYFRL*
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