prot_H-paniculata_contig20688.5374.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20688.5374.1
Unique Nameprot_H-paniculata_contig20688.5374.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length96
Homology
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BLAST of mRNA_H-paniculata_contig20688.5374.1 vs. uniprot
Match: A0A6H5LJ25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJ25_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 4.180e-7
Identity = 33/94 (35.11%), Postives = 45/94 (47.87%), Query Frame = 0 
Query:    1 GSVIWKWQNGTTEDDKFEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGTMDFAAVKLGADGTLTWKWQGGDSDGDDELLSASAGADGTVVLAG 94
            G+ +W+WQ+GT EDD  EA                            +   DFAAV L +DG   W+WQ G ++ DD L  A+   DG+VVL+G
Sbjct:  239 GTEVWRWQDGTAEDDFVEAVVHSDDGSAVLAGHTYGSWSSDNADGSFS--KDFAAVMLSSDGKEIWRWQDGTTE-DDTLEGAAIQGDGSVVLSG 329
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BLAST of mRNA_H-paniculata_contig20688.5374.1 vs. uniprot
Match: D8LHV1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV1_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 2.110e-6
Identity = 31/94 (32.98%), Postives = 43/94 (45.74%), Query Frame = 0 
Query:    1 GSVIWKWQNGTTEDDKFEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGTMDFAAVKLGADGTLTWKWQGGDSDGDDELLSASAGADGTVVLAG 94
            G+ +W WQ+GT+  D+ +A                                DFAAVKL A+GT  W+WQGG     + + + S   DGTV+LAG
Sbjct:  200 GTTLWTWQDGTSSSDEIQAAAATGDGFVVLAGYTFGEWSGGLTGEE----CDFAAVKLDANGTEVWRWQGGYEVEYNVIYAVSVQEDGTVLLAG 289
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20688.5374.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LJ25_9PHAE4.180e-735.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHV1_ECTSI2.110e-632.98Protein kinase domain-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20688contigH-paniculata_contig20688:2625..3863 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20688.5374.1mRNA_H-paniculata_contig20688.5374.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20688 2625..3864 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20688.5374.1 ID=prot_H-paniculata_contig20688.5374.1|Name=mRNA_H-paniculata_contig20688.5374.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=96bp
GSVIWKWQNGTTEDDKFEAAAALDDGSVVLAGGTTSVWSSSTSSSSSNGT
MDFAAVKLGADGTLTWKWQGGDSDGDDELLSASAGADGTVVLAGFC
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